Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.88□□□□□ -1.79
RNF40O75150 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.88□□□□□ -1.79
RNF40O75150 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.88□□□□□ -1.79
RNF40O75150 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
RNF40O75150 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
RNF40O75150 AC092881.1-201ENST00000638218 2733 ntBASIC3.87□□□□□ -1.79
RNF40O75150 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
RNF40O75150 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
RNF40O75150 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.87□□□□□ -1.79
RNF40O75150 RNU6-1313P-201ENST00000362622 102 ntBASIC3.87□□□□□ -1.79
RNF40O75150 SNORD58A-201ENST00000383875 65 ntBASIC3.87□□□□□ -1.79
RNF40O75150 Y_RNA.430-201ENST00000384081 110 ntBASIC3.87□□□□□ -1.79
RNF40O75150 MIR199A2-201ENST00000385289 110 ntBASIC3.87□□□□□ -1.79
RNF40O75150 TRIAP1P1-201ENST00000427062 225 ntBASIC3.87□□□□□ -1.79
RNF40O75150 AC107083.1-201ENST00000439643 279 ntBASIC3.87□□□□□ -1.79
RNF40O75150 AL031183.1-201ENST00000457667 207 ntBASIC3.87□□□□□ -1.79
RNF40O75150 RNA5SP164-201ENST00000516533 110 ntBASIC3.87□□□□□ -1.79
RNF40O75150 RNU1-142P-201ENST00000516682 145 ntBASIC3.87□□□□□ -1.79
RNF40O75150 SCARNA3-201ENST00000517097 143 ntBASIC3.87□□□□□ -1.79
RNF40O75150 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC3.87□□□□□ -1.79
RNF40O75150 MIR7975-201ENST00000619350 68 ntBASIC3.87□□□□□ -1.79
RNF40O75150 AC006111.3-201ENST00000622137 383 ntBASIC3.87□□□□□ -1.79
RNF40O75150 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
RNF40O75150 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.87□□□□□ -1.79
RNF40O75150 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.87□□□□□ -1.79
RNF40O75150 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
RNF40O75150 SNORD115-2-201ENST00000362842 82 ntBASIC3.86□□□□□ -1.79
RNF40O75150 SNORD115-20-201ENST00000365099 82 ntBASIC3.86□□□□□ -1.79
RNF40O75150 Y_RNA.316-201ENST00000365118 111 ntBASIC3.86□□□□□ -1.79
RNF40O75150 SNORA27-201ENST00000384323 126 ntBASIC3.86□□□□□ -1.79
RNF40O75150 RNU6-616P-201ENST00000384353 107 ntBASIC3.86□□□□□ -1.79
RNF40O75150 SNORA80E-201ENST00000384744 137 ntBASIC3.86□□□□□ -1.79
RNF40O75150 RNVU1-14-201ENST00000384770 164 ntBASIC3.86□□□□□ -1.79
RNF40O75150 MIR218-2-201ENST00000385006 110 ntBASIC3.86□□□□□ -1.79
RNF40O75150 U8.15-201ENST00000390947 134 ntBASIC3.86□□□□□ -1.79
RNF40O75150 CYCSP35-201ENST00000451978 304 ntBASIC3.86□□□□□ -1.79
RNF40O75150 RNU7-94P-201ENST00000459576 63 ntBASIC3.86□□□□□ -1.79
RNF40O75150 RNU6-1041P-201ENST00000516254 102 ntBASIC3.86□□□□□ -1.79
RNF40O75150 RNU6-1258P-201ENST00000516911 111 ntBASIC3.86□□□□□ -1.79
RNF40O75150 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.86□□□□□ -1.79
RNF40O75150 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC3.86□□□□□ -1.79
RNF40O75150 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
RNF40O75150 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.86□□□□□ -1.79
RNF40O75150 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
RNF40O75150 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
RNF40O75150 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.85□□□□□ -1.79
RNF40O75150 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
RNF40O75150 MIR30E-201ENST00000362104 92 ntBASIC3.85□□□□□ -1.79
RNF40O75150 RNU6-1084P-201ENST00000362498 107 ntBASIC3.85□□□□□ -1.79
RNF40O75150 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
RNF40O75150 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.85□□□□□ -1.79
RNF40O75150 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.85□□□□□ -1.79
RNF40O75150 AC006989.1-201ENST00000427212 131 ntBASIC3.85□□□□□ -1.79
RNF40O75150 RNU7-96P-201ENST00000459535 64 ntBASIC3.85□□□□□ -1.79
RNF40O75150 RN7SL330P-201ENST00000469709 307 ntBASIC3.85□□□□□ -1.79
RNF40O75150 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
RNF40O75150 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.85□□□□□ -1.79
RNF40O75150 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
RNF40O75150 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.79
RNF40O75150 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.79
RNF40O75150 MIR342-201ENST00000362212 99 ntBASIC3.84□□□□□ -1.79
RNF40O75150 RNU6-633P-201ENST00000362612 103 ntBASIC3.84□□□□□ -1.79
RNF40O75150 Y_RNA.191-201ENST00000363972 113 ntBASIC3.84□□□□□ -1.79
RNF40O75150 RNU6-1077P-201ENST00000410506 102 ntBASIC3.84□□□□□ -1.79
RNF40O75150 RNU2-63P-201ENST00000410792 194 ntBASIC3.84□□□□□ -1.79
RNF40O75150 ATP5A1P2-201ENST00000412323 255 ntBASIC3.84□□□□□ -1.79
RNF40O75150 RN7SL442P-201ENST00000473804 320 ntBASIC3.84□□□□□ -1.79
RNF40O75150 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC3.84□□□□□ -1.79
RNF40O75150 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.84□□□□□ -1.79
RNF40O75150 CTSLP2-204ENST00000629029 392 ntBASIC3.84□□□□□ -1.79
RNF40O75150 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.79
RNF40O75150 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.8
RNF40O75150 OTUD4P1-201ENST00000237841 3067 ntBASIC3.84□□□□□ -1.8
RNF40O75150 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.83□□□□□ -1.8
RNF40O75150 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.83□□□□□ -1.8
RNF40O75150 Y_RNA.171-201ENST00000363760 102 ntBASIC3.83□□□□□ -1.8
RNF40O75150 MIR889-201ENST00000401280 79 ntBASIC3.83□□□□□ -1.8
RNF40O75150 AP000567.1-201ENST00000406413 156 ntBASIC3.83□□□□□ -1.8
RNF40O75150 U6.98-201ENST00000637157 84 ntBASIC3.83□□□□□ -1.8
RNF40O75150 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.83□□□□□ -1.8
RNF40O75150 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
RNF40O75150 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
RNF40O75150 AC017071.1-201ENST00000564407 2204 ntBASIC3.82□□□□□ -1.8
RNF40O75150 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
RNF40O75150 SNORA1.1-201ENST00000364671 133 ntBASIC3.82□□□□□ -1.8
RNF40O75150 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
RNF40O75150 Y_RNA.494-201ENST00000384432 111 ntBASIC3.82□□□□□ -1.8
RNF40O75150 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC3.82□□□□□ -1.8
RNF40O75150 SNORA48.11-201ENST00000517015 89 ntBASIC3.82□□□□□ -1.8
RNF40O75150 AC008011.1-201ENST00000545989 227 ntBASIC3.82□□□□□ -1.8
RNF40O75150 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.82□□□□□ -1.8
RNF40O75150 MIR5195-201ENST00000583555 115 ntBASIC3.82□□□□□ -1.8
RNF40O75150 uc_338.25-201ENST00000613756 156 ntBASIC3.82□□□□□ -1.8
RNF40O75150 MIR6841-201ENST00000637129 72 ntBASIC3.82□□□□□ -1.8
RNF40O75150 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
RNF40O75150 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
RNF40O75150 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
RNF40O75150 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
RNF40O75150 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
RNF40O75150 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 111.2 ms