Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
GFRA3O60609 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
GFRA3O60609 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
GFRA3O60609 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.62□□□□□ -1.83
GFRA3O60609 Y_RNA.448-201ENST00000384185 108 ntBASIC3.62□□□□□ -1.83
GFRA3O60609 MIR199A2-201ENST00000385289 110 ntBASIC3.62□□□□□ -1.83
GFRA3O60609 RNA5SP292-201ENST00000390974 118 ntBASIC3.62□□□□□ -1.83
GFRA3O60609 HMGN2P18-201ENST00000450680 270 ntBASIC3.62□□□□□ -1.83
GFRA3O60609 MIR4435-1-201ENST00000582552 80 ntBASIC3.62□□□□□ -1.83
GFRA3O60609 MIR7702-201ENST00000621931 59 ntBASIC3.62□□□□□ -1.83
GFRA3O60609 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
GFRA3O60609 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC3.62□□□□□ -1.83
GFRA3O60609 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC3.61□□□□□ -1.83
GFRA3O60609 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.61□□□□□ -1.83
GFRA3O60609 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC3.61□□□□□ -1.83
GFRA3O60609 MIR422A-201ENST00000362286 90 ntBASIC3.61□□□□□ -1.83
GFRA3O60609 RNU6-865P-201ENST00000364772 107 ntBASIC3.61□□□□□ -1.83
GFRA3O60609 SNORA54-201ENST00000384281 123 ntBASIC3.61□□□□□ -1.83
GFRA3O60609 UBL5P3-201ENST00000475112 231 ntBASIC3.61□□□□□ -1.83
GFRA3O60609 Y_RNA.722-201ENST00000517279 114 ntBASIC3.61□□□□□ -1.83
GFRA3O60609 AC073308.1-201ENST00000623696 305 ntBASIC3.61□□□□□ -1.83
GFRA3O60609 AC090517.3-201ENST00000625170 141 ntBASIC3.61□□□□□ -1.83
GFRA3O60609 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.61□□□□□ -1.83
GFRA3O60609 AC096644.4-201ENST00000563417 2912 ntBASIC3.61□□□□□ -1.83
GFRA3O60609 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
GFRA3O60609 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
GFRA3O60609 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
GFRA3O60609 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
GFRA3O60609 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
GFRA3O60609 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.6□□□□□ -1.83
GFRA3O60609 AC000123.3-201ENST00000624029 4975 ntBASIC3.6□□□□□ -1.83
GFRA3O60609 RNU6-330P-201ENST00000363015 107 ntBASIC3.6□□□□□ -1.83
GFRA3O60609 RNA5SP467-201ENST00000391274 118 ntBASIC3.6□□□□□ -1.83
GFRA3O60609 AC083863.1-201ENST00000438811 231 ntBASIC3.6□□□□□ -1.83
GFRA3O60609 AC084357.1-201ENST00000473404 255 ntBASIC3.6□□□□□ -1.83
GFRA3O60609 RNU6-856P-201ENST00000516959 98 ntBASIC3.6□□□□□ -1.83
GFRA3O60609 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC3.6□□□□□ -1.83
GFRA3O60609 MTND5P40-201ENST00000559945 246 ntBASIC3.6□□□□□ -1.83
GFRA3O60609 AC067747.1-201ENST00000608026 250 ntBASIC3.6□□□□□ -1.83
GFRA3O60609 MIR7843-201ENST00000622274 79 ntBASIC3.6□□□□□ -1.83
GFRA3O60609 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.6□□□□□ -1.83
GFRA3O60609 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.6□□□□□ -1.83
GFRA3O60609 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
GFRA3O60609 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
GFRA3O60609 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
GFRA3O60609 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC3.59□□□□□ -1.83
GFRA3O60609 RNU6-681P-201ENST00000364012 104 ntBASIC3.59□□□□□ -1.83
GFRA3O60609 SNORA8.1-201ENST00000384250 140 ntBASIC3.59□□□□□ -1.83
GFRA3O60609 RNU6-1274P-201ENST00000384557 107 ntBASIC3.59□□□□□ -1.83
GFRA3O60609 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
GFRA3O60609 RNU6-1321P-201ENST00000390905 107 ntBASIC3.59□□□□□ -1.83
GFRA3O60609 HMGN2P8-201ENST00000391458 268 ntBASIC3.59□□□□□ -1.83
GFRA3O60609 RN7SKP192-201ENST00000411291 327 ntBASIC3.59□□□□□ -1.83
GFRA3O60609 AC234781.5-201ENST00000508429 271 ntBASIC3.59□□□□□ -1.83
GFRA3O60609 RAC1P2-201ENST00000511164 579 ntBASIC3.59□□□□□ -1.83
GFRA3O60609 Y_RNA.676-201ENST00000516393 96 ntBASIC3.59□□□□□ -1.83
GFRA3O60609 SNORA70.18-201ENST00000516696 98 ntBASIC3.59□□□□□ -1.83
GFRA3O60609 AC104027.1-201ENST00000521887 300 ntBASIC3.59□□□□□ -1.83
GFRA3O60609 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC3.59□□□□□ -1.83
GFRA3O60609 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC3.59□□□□□ -1.83
GFRA3O60609 MIR4524B-201ENST00000581569 115 ntBASIC3.59□□□□□ -1.83
GFRA3O60609 AL512598.1-201ENST00000610158 273 ntBASIC3.59□□□□□ -1.83
GFRA3O60609 MIR6717-201ENST00000622747 73 ntBASIC3.59□□□□□ -1.83
GFRA3O60609 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
GFRA3O60609 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
GFRA3O60609 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
GFRA3O60609 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
GFRA3O60609 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.58□□□□□ -1.84
GFRA3O60609 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
GFRA3O60609 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
GFRA3O60609 RNU1-15P-201ENST00000353977 144 ntBASIC3.58□□□□□ -1.84
GFRA3O60609 RNU6-208P-201ENST00000362431 107 ntBASIC3.58□□□□□ -1.84
GFRA3O60609 SNORA44-201ENST00000384584 132 ntBASIC3.58□□□□□ -1.84
GFRA3O60609 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC3.58□□□□□ -1.84
GFRA3O60609 AC244505.4-201ENST00000434905 287 ntBASIC3.58□□□□□ -1.84
GFRA3O60609 SSXP5-201ENST00000443473 287 ntBASIC3.58□□□□□ -1.84
GFRA3O60609 SNORA18.5-201ENST00000516616 101 ntBASIC3.58□□□□□ -1.84
GFRA3O60609 RNU7-35P-201ENST00000517174 62 ntBASIC3.58□□□□□ -1.84
GFRA3O60609 IGLV3-17-201ENST00000519099 244 ntBASIC3.58□□□□□ -1.84
GFRA3O60609 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.58□□□□□ -1.84
GFRA3O60609 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
GFRA3O60609 AL442644.1-201ENST00000454390 3105 ntBASIC3.58□□□□□ -1.84
GFRA3O60609 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC3.58□□□□□ -1.84
GFRA3O60609 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
GFRA3O60609 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
GFRA3O60609 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.57□□□□□ -1.84
GFRA3O60609 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC3.57□□□□□ -1.84
GFRA3O60609 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
GFRA3O60609 Y_RNA.36-201ENST00000362602 112 ntBASIC3.57□□□□□ -1.84
GFRA3O60609 SNORA25.6-201ENST00000364121 118 ntBASIC3.57□□□□□ -1.84
GFRA3O60609 SNORD38.2-201ENST00000384470 69 ntBASIC3.57□□□□□ -1.84
GFRA3O60609 RNU6-342P-201ENST00000384521 104 ntBASIC3.57□□□□□ -1.84
GFRA3O60609 CST9LP2-201ENST00000437612 320 ntBASIC3.57□□□□□ -1.84
GFRA3O60609 SNORD67.1-201ENST00000516618 108 ntBASIC3.57□□□□□ -1.84
GFRA3O60609 MIR3162-201ENST00000581818 82 ntBASIC3.57□□□□□ -1.84
GFRA3O60609 uc_338.25-201ENST00000613756 156 ntBASIC3.57□□□□□ -1.84
GFRA3O60609 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC3.57□□□□□ -1.84
GFRA3O60609 SNORD3E-202ENST00000627253 216 ntBASIC3.57□□□□□ -1.84
GFRA3O60609 MIR1248-201ENST00000629190 106 ntBASIC3.57□□□□□ -1.84
GFRA3O60609 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms