Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 PTMAP2-201ENST00000397627 327 ntBASIC3.8□□□□□ -1.8
ACTN4O43707 AL353813.1-201ENST00000440700 253 ntBASIC3.8□□□□□ -1.8
ACTN4O43707 AC006539.3-201ENST00000454258 129 ntBASIC3.8□□□□□ -1.8
ACTN4O43707 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.8□□□□□ -1.8
ACTN4O43707 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC3.8□□□□□ -1.8
ACTN4O43707 CTSLP2-204ENST00000629029 392 ntBASIC3.8□□□□□ -1.8
ACTN4O43707 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.8□□□□□ -1.8
ACTN4O43707 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.79□□□□□ -1.8
ACTN4O43707 AC017071.1-201ENST00000564407 2204 ntBASIC3.79□□□□□ -1.8
ACTN4O43707 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
ACTN4O43707 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
ACTN4O43707 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
ACTN4O43707 RNU4-35P-201ENST00000362588 141 ntBASIC3.79□□□□□ -1.8
ACTN4O43707 RNU1-23P-201ENST00000363361 144 ntBASIC3.79□□□□□ -1.8
ACTN4O43707 Y_RNA.377-201ENST00000365644 108 ntBASIC3.79□□□□□ -1.8
ACTN4O43707 Y_RNA.467-201ENST00000384297 102 ntBASIC3.79□□□□□ -1.8
ACTN4O43707 SNORA27-201ENST00000384323 126 ntBASIC3.79□□□□□ -1.8
ACTN4O43707 FO393413.1-201ENST00000402892 195 ntBASIC3.79□□□□□ -1.8
ACTN4O43707 RNU4-69P-201ENST00000410677 143 ntBASIC3.79□□□□□ -1.8
ACTN4O43707 Y_RNA.620-201ENST00000411009 88 ntBASIC3.79□□□□□ -1.8
ACTN4O43707 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.79□□□□□ -1.8
ACTN4O43707 SCARNA3-201ENST00000517097 143 ntBASIC3.79□□□□□ -1.8
ACTN4O43707 IGKV2-26-201ENST00000518305 343 ntBASIC3.79□□□□□ -1.8
ACTN4O43707 AL353149.1-201ENST00000610667 244 ntBASIC3.79□□□□□ -1.8
ACTN4O43707 AC021613.1-201ENST00000623880 111 ntBASIC3.79□□□□□ -1.8
ACTN4O43707 MIR7153-201ENST00000637758 57 ntBASIC3.79□□□□□ -1.8
ACTN4O43707 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
ACTN4O43707 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
ACTN4O43707 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
ACTN4O43707 RNY1P4-201ENST00000384595 115 ntBASIC3.78□□□□□ -1.8
ACTN4O43707 SNORA11-201ENST00000408789 128 ntBASIC3.78□□□□□ -1.8
ACTN4O43707 AC093578.1-201ENST00000415219 368 ntBASIC3.78□□□□□ -1.8
ACTN4O43707 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC3.78□□□□□ -1.8
ACTN4O43707 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.78□□□□□ -1.8
ACTN4O43707 CYP2C59P-201ENST00000457790 269 ntBASIC3.78□□□□□ -1.8
ACTN4O43707 RN7SL442P-201ENST00000473804 320 ntBASIC3.78□□□□□ -1.8
ACTN4O43707 AC139453.2-201ENST00000487255 133 ntBASIC3.78□□□□□ -1.8
ACTN4O43707 SCARNA20.6-201ENST00000517251 106 ntBASIC3.78□□□□□ -1.8
ACTN4O43707 AC104027.1-201ENST00000521887 300 ntBASIC3.78□□□□□ -1.8
ACTN4O43707 MIR7851-201ENST00000610611 160 ntBASIC3.78□□□□□ -1.8
ACTN4O43707 AC093010.3-201ENST00000570269 15214 ntBASIC3.78□□□□□ -1.8
ACTN4O43707 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.78□□□□□ -1.8
ACTN4O43707 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.77□□□□□ -1.81
ACTN4O43707 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
ACTN4O43707 RNU1-70P-201ENST00000362618 164 ntBASIC3.77□□□□□ -1.81
ACTN4O43707 Y_RNA.241-201ENST00000364470 117 ntBASIC3.77□□□□□ -1.81
ACTN4O43707 SNORA73.2-201ENST00000364946 201 ntBASIC3.77□□□□□ -1.81
ACTN4O43707 AL359837.1-201ENST00000381357 287 ntBASIC3.77□□□□□ -1.81
ACTN4O43707 MIR554-201ENST00000384874 96 ntBASIC3.77□□□□□ -1.81
ACTN4O43707 Y_RNA.611-201ENST00000410682 108 ntBASIC3.77□□□□□ -1.81
ACTN4O43707 MICF-203ENST00000432679 129 ntBASIC3.77□□□□□ -1.81
ACTN4O43707 HMGN1P18-201ENST00000457642 277 ntBASIC3.77□□□□□ -1.81
ACTN4O43707 RN7SL542P-201ENST00000467147 294 ntBASIC3.77□□□□□ -1.81
ACTN4O43707 RNU1-45P-201ENST00000517191 141 ntBASIC3.77□□□□□ -1.81
ACTN4O43707 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.77□□□□□ -1.81
ACTN4O43707 MIR3199-1-201ENST00000582434 88 ntBASIC3.77□□□□□ -1.81
ACTN4O43707 MIR3922-201ENST00000585192 84 ntBASIC3.77□□□□□ -1.81
ACTN4O43707 MIR8058-201ENST00000615737 89 ntBASIC3.77□□□□□ -1.81
ACTN4O43707 MIR7157-201ENST00000635801 60 ntBASIC3.77□□□□□ -1.81
ACTN4O43707 AL161912.2-201ENST00000565707 3007 ntBASIC3.77□□□□□ -1.81
ACTN4O43707 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
ACTN4O43707 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
ACTN4O43707 AC073346.2-201ENST00000624724 2058 ntBASIC3.76□□□□□ -1.81
ACTN4O43707 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.76□□□□□ -1.81
ACTN4O43707 RNU6-1201P-201ENST00000384227 107 ntBASIC3.76□□□□□ -1.81
ACTN4O43707 SNORD38C-201ENST00000384381 69 ntBASIC3.76□□□□□ -1.81
ACTN4O43707 MIR515-2-201ENST00000384883 83 ntBASIC3.76□□□□□ -1.81
ACTN4O43707 MIR515-1-201ENST00000384884 83 ntBASIC3.76□□□□□ -1.81
ACTN4O43707 MIR134-201ENST00000385258 73 ntBASIC3.76□□□□□ -1.81
ACTN4O43707 AP000567.1-201ENST00000406413 156 ntBASIC3.76□□□□□ -1.81
ACTN4O43707 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC3.76□□□□□ -1.81
ACTN4O43707 RNU7-96P-201ENST00000459535 64 ntBASIC3.76□□□□□ -1.81
ACTN4O43707 RNU6-998P-201ENST00000515894 101 ntBASIC3.76□□□□□ -1.81
ACTN4O43707 AC006130.2-201ENST00000586202 326 ntBASIC3.76□□□□□ -1.81
ACTN4O43707 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
ACTN4O43707 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
ACTN4O43707 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.75□□□□□ -1.81
ACTN4O43707 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.75□□□□□ -1.81
ACTN4O43707 Z83843.1-201ENST00000604070 3685 ntBASIC3.75□□□□□ -1.81
ACTN4O43707 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.75□□□□□ -1.81
ACTN4O43707 RNU6-652P-201ENST00000365488 107 ntBASIC3.75□□□□□ -1.81
ACTN4O43707 SNORD77B-201ENST00000391112 67 ntBASIC3.75□□□□□ -1.81
ACTN4O43707 RNA5SP482-201ENST00000391269 118 ntBASIC3.75□□□□□ -1.81
ACTN4O43707 RNU6ATAC-201ENST00000408749 126 ntBASIC3.75□□□□□ -1.81
ACTN4O43707 RNU6-1328P-201ENST00000410938 106 ntBASIC3.75□□□□□ -1.81
ACTN4O43707 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC3.75□□□□□ -1.81
ACTN4O43707 AL133547.1-201ENST00000448546 220 ntBASIC3.75□□□□□ -1.81
ACTN4O43707 RNU7-113P-201ENST00000459273 62 ntBASIC3.75□□□□□ -1.81
ACTN4O43707 AL163195.1-201ENST00000496941 348 ntBASIC3.75□□□□□ -1.81
ACTN4O43707 RNU6-1018P-201ENST00000516577 106 ntBASIC3.75□□□□□ -1.81
ACTN4O43707 AC023632.4-201ENST00000517783 191 ntBASIC3.75□□□□□ -1.81
ACTN4O43707 AC024995.1-201ENST00000523014 93 ntBASIC3.75□□□□□ -1.81
ACTN4O43707 AC096720.1-201ENST00000604441 183 ntBASIC3.75□□□□□ -1.81
ACTN4O43707 XIST_intron.1-201ENST00000619444 68 ntBASIC3.75□□□□□ -1.81
ACTN4O43707 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
ACTN4O43707 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.75□□□□□ -1.81
ACTN4O43707 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.74□□□□□ -1.81
ACTN4O43707 AC091152.2-201ENST00000591628 2569 ntBASIC3.74□□□□□ -1.81
ACTN4O43707 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.74□□□□□ -1.81
ACTN4O43707 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms