Protein–RNA interactions for Protein: H3BM21

Integrin beta (Fragment), humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3BM21 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
H3BM21 RNU6-268P-201ENST00000364174 107 ntBASIC3.52□□□□□ -1.85
H3BM21 MIR634-201ENST00000385208 97 ntBASIC3.52□□□□□ -1.85
H3BM21 RPL36AP48-201ENST00000485521 314 ntBASIC3.52□□□□□ -1.85
H3BM21 RNU6-579P-201ENST00000516879 102 ntBASIC3.52□□□□□ -1.85
H3BM21 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.52□□□□□ -1.85
H3BM21 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
H3BM21 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.52□□□□□ -1.85
H3BM21 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.51□□□□□ -1.85
H3BM21 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.51□□□□□ -1.85
H3BM21 AC008264.2-201ENST00000610193 3731 ntBASIC3.51□□□□□ -1.85
H3BM21 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.51□□□□□ -1.85
H3BM21 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.51□□□□□ -1.85
H3BM21 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.51□□□□□ -1.85
H3BM21 Y_RNA.57-201ENST00000362806 113 ntBASIC3.51□□□□□ -1.85
H3BM21 SNORD14E-201ENST00000364009 85 ntBASIC3.51□□□□□ -1.85
H3BM21 Y_RNA.247-201ENST00000364500 92 ntBASIC3.51□□□□□ -1.85
H3BM21 RNU6-1163P-201ENST00000364516 107 ntBASIC3.51□□□□□ -1.85
H3BM21 MIR591-201ENST00000385290 95 ntBASIC3.51□□□□□ -1.85
H3BM21 AL627390.1-201ENST00000396055 340 ntBASIC3.51□□□□□ -1.85
H3BM21 POLR2J4-204ENST00000418424 324 ntBASIC3.51□□□□□ -1.85
H3BM21 RNU6-871P-201ENST00000516122 100 ntBASIC3.51□□□□□ -1.85
H3BM21 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC3.51□□□□□ -1.85
H3BM21 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.51□□□□□ -1.85
H3BM21 MIR3609-201ENST00000582661 80 ntBASIC3.51□□□□□ -1.85
H3BM21 AC090115.4-201ENST00000609970 188 ntBASIC3.51□□□□□ -1.85
H3BM21 AC021613.1-201ENST00000623880 111 ntBASIC3.51□□□□□ -1.85
H3BM21 SNORA50A-202ENST00000629536 136 ntBASIC3.51□□□□□ -1.85
H3BM21 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
H3BM21 AC008163.1-202ENST00000636004 2889 ntBASIC3.51□□□□□ -1.85
H3BM21 AC018630.2-201ENST00000534866 2403 ntBASIC3.51□□□□□ -1.85
H3BM21 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
H3BM21 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
H3BM21 AC002546.1-201ENST00000588041 2504 ntBASIC3.5□□□□□ -1.85
H3BM21 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.5□□□□□ -1.85
H3BM21 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
H3BM21 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
H3BM21 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
H3BM21 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
H3BM21 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.5□□□□□ -1.85
H3BM21 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
H3BM21 MIR490-201ENST00000384865 128 ntBASIC3.5□□□□□ -1.85
H3BM21 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
H3BM21 MIR1253-201ENST00000408273 105 ntBASIC3.5□□□□□ -1.85
H3BM21 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC3.5□□□□□ -1.85
H3BM21 AC069257.2-201ENST00000441819 155 ntBASIC3.5□□□□□ -1.85
H3BM21 AC087499.4-201ENST00000448505 178 ntBASIC3.5□□□□□ -1.85
H3BM21 RNU7-113P-201ENST00000459273 62 ntBASIC3.5□□□□□ -1.85
H3BM21 SNORA70.18-201ENST00000516696 98 ntBASIC3.5□□□□□ -1.85
H3BM21 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.5□□□□□ -1.85
H3BM21 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC3.5□□□□□ -1.85
H3BM21 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.5□□□□□ -1.85
H3BM21 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.5□□□□□ -1.85
H3BM21 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
H3BM21 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
H3BM21 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
H3BM21 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
H3BM21 Y_RNA.171-201ENST00000363760 102 ntBASIC3.49□□□□□ -1.85
H3BM21 RNU6-478P-201ENST00000363904 110 ntBASIC3.49□□□□□ -1.85
H3BM21 RNU1-33P-201ENST00000364249 162 ntBASIC3.49□□□□□ -1.85
H3BM21 Y_RNA.267-201ENST00000364679 109 ntBASIC3.49□□□□□ -1.85
H3BM21 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
H3BM21 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.49□□□□□ -1.85
H3BM21 RNU6-1186P-201ENST00000410429 97 ntBASIC3.49□□□□□ -1.85
H3BM21 RPS15AP28-201ENST00000435088 386 ntBASIC3.49□□□□□ -1.85
H3BM21 SNRPGP14-201ENST00000435400 219 ntBASIC3.49□□□□□ -1.85
H3BM21 AC025750.2-201ENST00000442609 450 ntBASIC3.49□□□□□ -1.85
H3BM21 snoU13.28-201ENST00000459235 104 ntBASIC3.49□□□□□ -1.85
H3BM21 SNORA31.4-201ENST00000516049 129 ntBASIC3.49□□□□□ -1.85
H3BM21 RNU2-27P-201ENST00000516185 142 ntBASIC3.49□□□□□ -1.85
H3BM21 MIR3134-201ENST00000579433 74 ntBASIC3.49□□□□□ -1.85
H3BM21 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC3.49□□□□□ -1.85
H3BM21 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
H3BM21 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC3.49□□□□□ -1.85
H3BM21 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.48□□□□□ -1.85
H3BM21 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
H3BM21 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
H3BM21 Y_RNA.205-201ENST00000364128 113 ntBASIC3.48□□□□□ -1.85
H3BM21 RNA5SP42-201ENST00000364278 115 ntBASIC3.48□□□□□ -1.85
H3BM21 RNU6-283P-201ENST00000364788 107 ntBASIC3.48□□□□□ -1.85
H3BM21 SNORA40.18-201ENST00000391200 128 ntBASIC3.48□□□□□ -1.85
H3BM21 MIR1270-201ENST00000459320 83 ntBASIC3.48□□□□□ -1.85
H3BM21 SEPT14P17-201ENST00000617978 177 ntBASIC3.48□□□□□ -1.85
H3BM21 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.48□□□□□ -1.85
H3BM21 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
H3BM21 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
H3BM21 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
H3BM21 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
H3BM21 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.48□□□□□ -1.85
H3BM21 ICE2P2-201ENST00000483823 2787 ntBASIC3.47□□□□□ -1.85
H3BM21 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
H3BM21 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.47□□□□□ -1.85
H3BM21 RNU4-35P-201ENST00000362588 141 ntBASIC3.47□□□□□ -1.85
H3BM21 RNU4-32P-201ENST00000363404 141 ntBASIC3.47□□□□□ -1.85
H3BM21 Y_RNA.140-201ENST00000363474 103 ntBASIC3.47□□□□□ -1.85
H3BM21 AC025518.1-201ENST00000479856 347 ntBASIC3.47□□□□□ -1.85
H3BM21 AL358944.1-201ENST00000528537 144 ntBASIC3.47□□□□□ -1.85
H3BM21 MIR548AE2-201ENST00000583456 67 ntBASIC3.47□□□□□ -1.85
H3BM21 AL353149.1-201ENST00000610667 244 ntBASIC3.47□□□□□ -1.85
H3BM21 U4.6-201ENST00000621618 127 ntBASIC3.47□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 90.1 ms