Protein–RNA interactions for Protein: A0A1B0GVL6

TMEM238L, HCG1800530, isoform CRA_b, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM238LA0A1B0GVL6 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.57□□□□□ -2
TMEM238LA0A1B0GVL6 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
TMEM238LA0A1B0GVL6 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.57□□□□□ -2
TMEM238LA0A1B0GVL6 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
TMEM238LA0A1B0GVL6 RNU6-756P-201ENST00000383997 107 ntBASIC2.56□□□□□ -2
TMEM238LA0A1B0GVL6 MIR548D2-201ENST00000384955 97 ntBASIC2.56□□□□□ -2
TMEM238LA0A1B0GVL6 MIR659-201ENST00000384963 97 ntBASIC2.56□□□□□ -2
TMEM238LA0A1B0GVL6 RNA5SP144-201ENST00000410846 116 ntBASIC2.56□□□□□ -2
TMEM238LA0A1B0GVL6 RNA5SP100-201ENST00000410903 110 ntBASIC2.56□□□□□ -2
TMEM238LA0A1B0GVL6 RNA5SP59-201ENST00000410922 110 ntBASIC2.56□□□□□ -2
TMEM238LA0A1B0GVL6 AL022718.1-201ENST00000412004 84 ntBASIC2.56□□□□□ -2
TMEM238LA0A1B0GVL6 RNU7-67P-201ENST00000459003 62 ntBASIC2.56□□□□□ -2
TMEM238LA0A1B0GVL6 Y_RNA.694-201ENST00000516677 117 ntBASIC2.56□□□□□ -2
TMEM238LA0A1B0GVL6 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.56□□□□□ -2
TMEM238LA0A1B0GVL6 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.56□□□□□ -2
TMEM238LA0A1B0GVL6 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC2.56□□□□□ -2
TMEM238LA0A1B0GVL6 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC2.56□□□□□ -2
TMEM238LA0A1B0GVL6 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.56□□□□□ -2
TMEM238LA0A1B0GVL6 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.56□□□□□ -2
TMEM238LA0A1B0GVL6 AC091905.4-201ENST00000623432 202 ntBASIC2.56□□□□□ -2
TMEM238LA0A1B0GVL6 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
TMEM238LA0A1B0GVL6 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
TMEM238LA0A1B0GVL6 MIR30E-201ENST00000362104 92 ntBASIC2.55□□□□□ -2
TMEM238LA0A1B0GVL6 MIR424-201ENST00000362227 98 ntBASIC2.55□□□□□ -2
TMEM238LA0A1B0GVL6 RNU6-766P-201ENST00000362478 107 ntBASIC2.55□□□□□ -2
TMEM238LA0A1B0GVL6 RNU6-1255P-201ENST00000363434 112 ntBASIC2.55□□□□□ -2
TMEM238LA0A1B0GVL6 RNA5SP97-201ENST00000365006 84 ntBASIC2.55□□□□□ -2
TMEM238LA0A1B0GVL6 AC055731.1-201ENST00000474387 401 ntBASIC2.55□□□□□ -2
TMEM238LA0A1B0GVL6 SNORD46.2-201ENST00000516021 102 ntBASIC2.55□□□□□ -2
TMEM238LA0A1B0GVL6 SNORA31.4-201ENST00000516049 129 ntBASIC2.55□□□□□ -2
TMEM238LA0A1B0GVL6 RNU2-27P-201ENST00000516185 142 ntBASIC2.55□□□□□ -2
TMEM238LA0A1B0GVL6 Y_RNA.677-201ENST00000516401 85 ntBASIC2.55□□□□□ -2
TMEM238LA0A1B0GVL6 RNA5SP281-201ENST00000516504 135 ntBASIC2.55□□□□□ -2
TMEM238LA0A1B0GVL6 RNU7-53P-201ENST00000516705 60 ntBASIC2.55□□□□□ -2
TMEM238LA0A1B0GVL6 RNU6-537P-201ENST00000517277 103 ntBASIC2.55□□□□□ -2
TMEM238LA0A1B0GVL6 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC2.55□□□□□ -2
TMEM238LA0A1B0GVL6 AP000648.3-201ENST00000623539 4507 ntBASIC2.55□□□□□ -2
TMEM238LA0A1B0GVL6 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
TMEM238LA0A1B0GVL6 MIR331-201ENST00000362302 94 ntBASIC2.54□□□□□ -2
TMEM238LA0A1B0GVL6 RNA5SP510-201ENST00000364697 99 ntBASIC2.54□□□□□ -2
TMEM238LA0A1B0GVL6 SNORA51.5-201ENST00000384126 131 ntBASIC2.54□□□□□ -2
TMEM238LA0A1B0GVL6 RNU6-1113P-201ENST00000384348 107 ntBASIC2.54□□□□□ -2
TMEM238LA0A1B0GVL6 RNA5SP397-201ENST00000391323 118 ntBASIC2.54□□□□□ -2
TMEM238LA0A1B0GVL6 RNU6ATAC7P-201ENST00000408111 127 ntBASIC2.54□□□□□ -2
TMEM238LA0A1B0GVL6 RN7SKP192-201ENST00000411291 327 ntBASIC2.54□□□□□ -2
TMEM238LA0A1B0GVL6 AL135938.1-201ENST00000443141 297 ntBASIC2.54□□□□□ -2
TMEM238LA0A1B0GVL6 RNU6-893P-201ENST00000458841 100 ntBASIC2.54□□□□□ -2
TMEM238LA0A1B0GVL6 RNA5SP246-201ENST00000458909 119 ntBASIC2.54□□□□□ -2
TMEM238LA0A1B0GVL6 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC2.54□□□□□ -2
TMEM238LA0A1B0GVL6 RNU6-958P-201ENST00000516995 106 ntBASIC2.54□□□□□ -2
TMEM238LA0A1B0GVL6 AC068339.1-201ENST00000526965 141 ntBASIC2.54□□□□□ -2
TMEM238LA0A1B0GVL6 MIR5009-201ENST00000578736 100 ntBASIC2.54□□□□□ -2
TMEM238LA0A1B0GVL6 MIR3152-201ENST00000579801 74 ntBASIC2.54□□□□□ -2
TMEM238LA0A1B0GVL6 MIR3200-201ENST00000580767 85 ntBASIC2.54□□□□□ -2
TMEM238LA0A1B0GVL6 MIR3667-201ENST00000581025 74 ntBASIC2.54□□□□□ -2
TMEM238LA0A1B0GVL6 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.54□□□□□ -2
TMEM238LA0A1B0GVL6 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
TMEM238LA0A1B0GVL6 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.54□□□□□ -2
TMEM238LA0A1B0GVL6 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
TMEM238LA0A1B0GVL6 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.54□□□□□ -2
TMEM238LA0A1B0GVL6 AC092881.1-201ENST00000638218 2733 ntBASIC2.54□□□□□ -2
TMEM238LA0A1B0GVL6 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
TMEM238LA0A1B0GVL6 U8.6-201ENST00000364939 135 ntBASIC2.53□□□□□ -2
TMEM238LA0A1B0GVL6 Y_RNA.328-201ENST00000365208 113 ntBASIC2.53□□□□□ -2
TMEM238LA0A1B0GVL6 Y_RNA.344-201ENST00000365381 112 ntBASIC2.53□□□□□ -2
TMEM238LA0A1B0GVL6 MIR526A1-201ENST00000384897 85 ntBASIC2.53□□□□□ -2
TMEM238LA0A1B0GVL6 RNU6-360P-201ENST00000390944 104 ntBASIC2.53□□□□□ -2
TMEM238LA0A1B0GVL6 RNA5SP210-201ENST00000391034 120 ntBASIC2.53□□□□□ -2
TMEM238LA0A1B0GVL6 RPS29P29-201ENST00000456396 171 ntBASIC2.53□□□□□ -2
TMEM238LA0A1B0GVL6 SNORD123-201ENST00000459473 70 ntBASIC2.53□□□□□ -2
TMEM238LA0A1B0GVL6 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC2.53□□□□□ -2
TMEM238LA0A1B0GVL6 RNA5SP96-201ENST00000516041 107 ntBASIC2.53□□□□□ -2
TMEM238LA0A1B0GVL6 RNU7-6P-201ENST00000516845 62 ntBASIC2.53□□□□□ -2
TMEM238LA0A1B0GVL6 IGHVII-40-1-201ENST00000517316 58 ntBASIC2.53□□□□□ -2
TMEM238LA0A1B0GVL6 MIR6736-201ENST00000616799 59 ntBASIC2.53□□□□□ -2
TMEM238LA0A1B0GVL6 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC2.53□□□□□ -2
TMEM238LA0A1B0GVL6 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC2.53□□□□□ -2
TMEM238LA0A1B0GVL6 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.53□□□□□ -2.01
TMEM238LA0A1B0GVL6 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
TMEM238LA0A1B0GVL6 AC093831.2-201ENST00000624393 3427 ntBASIC2.52□□□□□ -2.01
TMEM238LA0A1B0GVL6 AC009487.2-201ENST00000420969 6821 ntBASIC2.52□□□□□ -2.01
TMEM238LA0A1B0GVL6 SNORD56.3-201ENST00000363507 71 ntBASIC2.52□□□□□ -2.01
TMEM238LA0A1B0GVL6 RNU6-1067P-201ENST00000384752 107 ntBASIC2.52□□□□□ -2.01
TMEM238LA0A1B0GVL6 MIR144-201ENST00000384886 86 ntBASIC2.52□□□□□ -2.01
TMEM238LA0A1B0GVL6 MIR17-201ENST00000385012 84 ntBASIC2.52□□□□□ -2.01
TMEM238LA0A1B0GVL6 AL512326.2-201ENST00000426359 151 ntBASIC2.52□□□□□ -2.01
TMEM238LA0A1B0GVL6 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC2.52□□□□□ -2.01
TMEM238LA0A1B0GVL6 AC004812.1-201ENST00000540773 146 ntBASIC2.52□□□□□ -2.01
TMEM238LA0A1B0GVL6 MIR5004-201ENST00000579078 107 ntBASIC2.52□□□□□ -2.01
TMEM238LA0A1B0GVL6 MIR548AR-201ENST00000582191 57 ntBASIC2.52□□□□□ -2.01
TMEM238LA0A1B0GVL6 RNA5SP440-201ENST00000612665 119 ntBASIC2.52□□□□□ -2.01
TMEM238LA0A1B0GVL6 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC2.51□□□□□ -2.01
TMEM238LA0A1B0GVL6 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
TMEM238LA0A1B0GVL6 Y_RNA.531-201ENST00000384589 121 ntBASIC2.51□□□□□ -2.01
TMEM238LA0A1B0GVL6 RNU6-1319P-201ENST00000390855 104 ntBASIC2.51□□□□□ -2.01
TMEM238LA0A1B0GVL6 RNU6-747P-201ENST00000390928 104 ntBASIC2.51□□□□□ -2.01
TMEM238LA0A1B0GVL6 RNU6-241P-201ENST00000391148 104 ntBASIC2.51□□□□□ -2.01
TMEM238LA0A1B0GVL6 RNA5SP261-201ENST00000410536 106 ntBASIC2.51□□□□□ -2.01
TMEM238LA0A1B0GVL6 RNU6-177P-201ENST00000411257 104 ntBASIC2.51□□□□□ -2.01
TMEM238LA0A1B0GVL6 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms