Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.26□□□□□ -1.89
PCDHGA11Q9Y5H2 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
PCDHGA11Q9Y5H2 RNU6-766P-201ENST00000362478 107 ntBASIC3.26□□□□□ -1.89
PCDHGA11Q9Y5H2 Y_RNA.163-201ENST00000363702 113 ntBASIC3.26□□□□□ -1.89
PCDHGA11Q9Y5H2 SNORD38C-201ENST00000384381 69 ntBASIC3.26□□□□□ -1.89
PCDHGA11Q9Y5H2 MIR627-201ENST00000384979 97 ntBASIC3.26□□□□□ -1.89
PCDHGA11Q9Y5H2 SNORD17-201ENST00000390930 237 ntBASIC3.26□□□□□ -1.89
PCDHGA11Q9Y5H2 U8.17-201ENST00000391292 132 ntBASIC3.26□□□□□ -1.89
PCDHGA11Q9Y5H2 AL590004.2-201ENST00000404787 371 ntBASIC3.26□□□□□ -1.89
PCDHGA11Q9Y5H2 RNA5SP385-201ENST00000515947 110 ntBASIC3.26□□□□□ -1.89
PCDHGA11Q9Y5H2 AC026403.1-201ENST00000518938 295 ntBASIC3.26□□□□□ -1.89
PCDHGA11Q9Y5H2 AP003484.1-201ENST00000530974 250 ntBASIC3.26□□□□□ -1.89
PCDHGA11Q9Y5H2 AC021443.1-201ENST00000604478 211 ntBASIC3.26□□□□□ -1.89
PCDHGA11Q9Y5H2 AC009831.4-201ENST00000620744 325 ntBASIC3.26□□□□□ -1.89
PCDHGA11Q9Y5H2 AC039056.2-201ENST00000622261 511 ntBASIC3.26□□□□□ -1.89
PCDHGA11Q9Y5H2 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
PCDHGA11Q9Y5H2 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.25□□□□□ -1.89
PCDHGA11Q9Y5H2 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
PCDHGA11Q9Y5H2 RNA5SP383-201ENST00000362934 120 ntBASIC3.25□□□□□ -1.89
PCDHGA11Q9Y5H2 SNORD56.3-201ENST00000363507 71 ntBASIC3.25□□□□□ -1.89
PCDHGA11Q9Y5H2 SNORA63.5-201ENST00000363548 123 ntBASIC3.25□□□□□ -1.89
PCDHGA11Q9Y5H2 RNU6-756P-201ENST00000383997 107 ntBASIC3.25□□□□□ -1.89
PCDHGA11Q9Y5H2 RNY1P6-201ENST00000384193 109 ntBASIC3.25□□□□□ -1.89
PCDHGA11Q9Y5H2 MIR29C-201ENST00000385231 88 ntBASIC3.25□□□□□ -1.89
PCDHGA11Q9Y5H2 RNY4P30-201ENST00000410216 95 ntBASIC3.25□□□□□ -1.89
PCDHGA11Q9Y5H2 RN7SL542P-201ENST00000467147 294 ntBASIC3.25□□□□□ -1.89
PCDHGA11Q9Y5H2 AC025518.1-201ENST00000479856 347 ntBASIC3.25□□□□□ -1.89
PCDHGA11Q9Y5H2 AC023632.4-201ENST00000517783 191 ntBASIC3.25□□□□□ -1.89
PCDHGA11Q9Y5H2 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC3.25□□□□□ -1.89
PCDHGA11Q9Y5H2 AC012442.3-202ENST00000636742 206 ntBASIC3.25□□□□□ -1.89
PCDHGA11Q9Y5H2 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC3.25□□□□□ -1.89
PCDHGA11Q9Y5H2 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
PCDHGA11Q9Y5H2 FAM35CP-201ENST00000554755 2470 ntBASIC3.25□□□□□ -1.89
PCDHGA11Q9Y5H2 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
PCDHGA11Q9Y5H2 RNU6-349P-201ENST00000362402 107 ntBASIC3.24□□□□□ -1.89
PCDHGA11Q9Y5H2 RNU4-35P-201ENST00000362588 141 ntBASIC3.24□□□□□ -1.89
PCDHGA11Q9Y5H2 Y_RNA.351-201ENST00000365436 96 ntBASIC3.24□□□□□ -1.89
PCDHGA11Q9Y5H2 Y_RNA.369-201ENST00000365568 117 ntBASIC3.24□□□□□ -1.89
PCDHGA11Q9Y5H2 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
PCDHGA11Q9Y5H2 RNU6-1014P-201ENST00000383940 103 ntBASIC3.24□□□□□ -1.89
PCDHGA11Q9Y5H2 Y_RNA.440-201ENST00000384120 114 ntBASIC3.24□□□□□ -1.89
PCDHGA11Q9Y5H2 SNORA51.5-201ENST00000384126 131 ntBASIC3.24□□□□□ -1.89
PCDHGA11Q9Y5H2 Y_RNA.549-201ENST00000384657 102 ntBASIC3.24□□□□□ -1.89
PCDHGA11Q9Y5H2 MIR181B1-201ENST00000385240 110 ntBASIC3.24□□□□□ -1.89
PCDHGA11Q9Y5H2 AC092017.2-201ENST00000427600 362 ntBASIC3.24□□□□□ -1.89
PCDHGA11Q9Y5H2 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.24□□□□□ -1.89
PCDHGA11Q9Y5H2 AC006483.1-201ENST00000487308 313 ntBASIC3.24□□□□□ -1.89
PCDHGA11Q9Y5H2 RNY4P20-201ENST00000516678 93 ntBASIC3.24□□□□□ -1.89
PCDHGA11Q9Y5H2 SNORD36C-201ENST00000516733 66 ntBASIC3.24□□□□□ -1.89
PCDHGA11Q9Y5H2 IGKV2-26-201ENST00000518305 343 ntBASIC3.24□□□□□ -1.89
PCDHGA11Q9Y5H2 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC3.24□□□□□ -1.89
PCDHGA11Q9Y5H2 AC005786.1-201ENST00000588553 154 ntBASIC3.24□□□□□ -1.89
PCDHGA11Q9Y5H2 AC015726.2-201ENST00000620112 122 ntBASIC3.24□□□□□ -1.89
PCDHGA11Q9Y5H2 AL356274.2-201ENST00000624379 3752 ntBASIC3.24□□□□□ -1.89
PCDHGA11Q9Y5H2 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC3.23□□□□□ -1.89
PCDHGA11Q9Y5H2 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
PCDHGA11Q9Y5H2 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
PCDHGA11Q9Y5H2 RNU6-414P-201ENST00000363705 104 ntBASIC3.23□□□□□ -1.89
PCDHGA11Q9Y5H2 AL627390.1-201ENST00000396055 340 ntBASIC3.23□□□□□ -1.89
PCDHGA11Q9Y5H2 RPS29P4-201ENST00000414733 161 ntBASIC3.23□□□□□ -1.89
PCDHGA11Q9Y5H2 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC3.23□□□□□ -1.89
PCDHGA11Q9Y5H2 ICE2P2-201ENST00000483823 2787 ntBASIC3.23□□□□□ -1.89
PCDHGA11Q9Y5H2 RNA5SP281-201ENST00000516504 135 ntBASIC3.23□□□□□ -1.89
PCDHGA11Q9Y5H2 IGKV3-31-201ENST00000523109 329 ntBASIC3.23□□□□□ -1.89
PCDHGA11Q9Y5H2 RNU6-94P-201ENST00000607728 107 ntBASIC3.23□□□□□ -1.89
PCDHGA11Q9Y5H2 AC019176.2-201ENST00000611579 315 ntBASIC3.23□□□□□ -1.89
PCDHGA11Q9Y5H2 AC034229.5-201ENST00000624258 185 ntBASIC3.23□□□□□ -1.89
PCDHGA11Q9Y5H2 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.23□□□□□ -1.89
PCDHGA11Q9Y5H2 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
PCDHGA11Q9Y5H2 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
PCDHGA11Q9Y5H2 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC3.22□□□□□ -1.89
PCDHGA11Q9Y5H2 SNORD115-3-201ENST00000363100 82 ntBASIC3.22□□□□□ -1.89
PCDHGA11Q9Y5H2 Y_RNA.323-201ENST00000365157 109 ntBASIC3.22□□□□□ -1.89
PCDHGA11Q9Y5H2 RNU6-163P-201ENST00000384396 106 ntBASIC3.22□□□□□ -1.89
PCDHGA11Q9Y5H2 RNU6-440P-201ENST00000390882 105 ntBASIC3.22□□□□□ -1.89
PCDHGA11Q9Y5H2 RNA5SP109-201ENST00000391010 116 ntBASIC3.22□□□□□ -1.89
PCDHGA11Q9Y5H2 AC069257.2-201ENST00000441819 155 ntBASIC3.22□□□□□ -1.89
PCDHGA11Q9Y5H2 RPL39P34-201ENST00000477141 156 ntBASIC3.22□□□□□ -1.89
PCDHGA11Q9Y5H2 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.22□□□□□ -1.89
PCDHGA11Q9Y5H2 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3.22□□□□□ -1.89
PCDHGA11Q9Y5H2 MIR4506-201ENST00000584693 77 ntBASIC3.22□□□□□ -1.89
PCDHGA11Q9Y5H2 U3.45-201ENST00000607547 219 ntBASIC3.22□□□□□ -1.89
PCDHGA11Q9Y5H2 AC073476.4-201ENST00000628409 72 ntBASIC3.22□□□□□ -1.89
PCDHGA11Q9Y5H2 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
PCDHGA11Q9Y5H2 AC093908.1-201ENST00000623125 8092 ntBASIC3.21□□□□□ -1.9
PCDHGA11Q9Y5H2 RNU1-58P-201ENST00000362413 163 ntBASIC3.21□□□□□ -1.9
PCDHGA11Q9Y5H2 RNU6-1019P-201ENST00000364424 107 ntBASIC3.21□□□□□ -1.9
PCDHGA11Q9Y5H2 Y_RNA.298-201ENST00000364960 107 ntBASIC3.21□□□□□ -1.9
PCDHGA11Q9Y5H2 MIR200C-201ENST00000384980 68 ntBASIC3.21□□□□□ -1.9
PCDHGA11Q9Y5H2 RN7SKP220-201ENST00000410611 288 ntBASIC3.21□□□□□ -1.9
PCDHGA11Q9Y5H2 RN7SKP123-201ENST00000410732 291 ntBASIC3.21□□□□□ -1.9
PCDHGA11Q9Y5H2 STAG3L5P-204ENST00000443759 179 ntBASIC3.21□□□□□ -1.9
PCDHGA11Q9Y5H2 RNU7-164P-201ENST00000459221 62 ntBASIC3.21□□□□□ -1.9
PCDHGA11Q9Y5H2 AC069114.2-201ENST00000604699 304 ntBASIC3.21□□□□□ -1.9
PCDHGA11Q9Y5H2 MIR8054-201ENST00000620877 86 ntBASIC3.21□□□□□ -1.9
PCDHGA11Q9Y5H2 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
PCDHGA11Q9Y5H2 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
PCDHGA11Q9Y5H2 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
PCDHGA11Q9Y5H2 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
PCDHGA11Q9Y5H2 AC073346.2-201ENST00000624724 2058 ntBASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms