Protein–RNA interactions for Protein: Q9Y5E6

PCDHB3, Protocadherin beta-3, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3Q9Y5E6 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
PCDHB3Q9Y5E6 GABRG2-229ENST00000641017 3628 ntBASIC3.76□□□□□ -1.81
PCDHB3Q9Y5E6 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
PCDHB3Q9Y5E6 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC3.76□□□□□ -1.81
PCDHB3Q9Y5E6 SNORA71.3-201ENST00000362582 128 ntBASIC3.76□□□□□ -1.81
PCDHB3Q9Y5E6 RNU1-23P-201ENST00000363361 144 ntBASIC3.76□□□□□ -1.81
PCDHB3Q9Y5E6 RNA5SP399-201ENST00000364003 117 ntBASIC3.76□□□□□ -1.81
PCDHB3Q9Y5E6 Y_RNA.241-201ENST00000364470 117 ntBASIC3.76□□□□□ -1.81
PCDHB3Q9Y5E6 SNORD77B-201ENST00000391112 67 ntBASIC3.76□□□□□ -1.81
PCDHB3Q9Y5E6 Z98941.1-201ENST00000407764 100 ntBASIC3.76□□□□□ -1.81
PCDHB3Q9Y5E6 RNU6-1077P-201ENST00000410506 102 ntBASIC3.76□□□□□ -1.81
PCDHB3Q9Y5E6 RNU7-170P-201ENST00000459303 61 ntBASIC3.76□□□□□ -1.81
PCDHB3Q9Y5E6 RNU6-1258P-201ENST00000516911 111 ntBASIC3.76□□□□□ -1.81
PCDHB3Q9Y5E6 AC091167.4-201ENST00000605079 184 ntBASIC3.76□□□□□ -1.81
PCDHB3Q9Y5E6 AL512310.12-203ENST00000640543 90 ntBASIC3.76□□□□□ -1.81
PCDHB3Q9Y5E6 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
PCDHB3Q9Y5E6 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
PCDHB3Q9Y5E6 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
PCDHB3Q9Y5E6 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.75□□□□□ -1.81
PCDHB3Q9Y5E6 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
PCDHB3Q9Y5E6 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.75□□□□□ -1.81
PCDHB3Q9Y5E6 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.75□□□□□ -1.81
PCDHB3Q9Y5E6 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.75□□□□□ -1.81
PCDHB3Q9Y5E6 RNU6-633P-201ENST00000362612 103 ntBASIC3.75□□□□□ -1.81
PCDHB3Q9Y5E6 RNA5SP387-201ENST00000364226 106 ntBASIC3.75□□□□□ -1.81
PCDHB3Q9Y5E6 SNORA1.1-201ENST00000364671 133 ntBASIC3.75□□□□□ -1.81
PCDHB3Q9Y5E6 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC3.75□□□□□ -1.81
PCDHB3Q9Y5E6 AC083863.1-201ENST00000438811 231 ntBASIC3.75□□□□□ -1.81
PCDHB3Q9Y5E6 MIR1270-201ENST00000459320 83 ntBASIC3.75□□□□□ -1.81
PCDHB3Q9Y5E6 SCARNA11.3-201ENST00000517276 130 ntBASIC3.75□□□□□ -1.81
PCDHB3Q9Y5E6 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.75□□□□□ -1.81
PCDHB3Q9Y5E6 ZNF861P-201ENST00000588126 639 ntBASIC3.75□□□□□ -1.81
PCDHB3Q9Y5E6 AL121772.2-201ENST00000614331 297 ntBASIC3.75□□□□□ -1.81
PCDHB3Q9Y5E6 U7.8-201ENST00000619968 63 ntBASIC3.75□□□□□ -1.81
PCDHB3Q9Y5E6 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
PCDHB3Q9Y5E6 Y_RNA.333-201ENST00000365274 102 ntBASIC3.74□□□□□ -1.81
PCDHB3Q9Y5E6 Y_RNA.494-201ENST00000384432 111 ntBASIC3.74□□□□□ -1.81
PCDHB3Q9Y5E6 RNU2-48P-201ENST00000410694 191 ntBASIC3.74□□□□□ -1.81
PCDHB3Q9Y5E6 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.74□□□□□ -1.81
PCDHB3Q9Y5E6 AL357552.1-201ENST00000445254 415 ntBASIC3.74□□□□□ -1.81
PCDHB3Q9Y5E6 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
PCDHB3Q9Y5E6 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
PCDHB3Q9Y5E6 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
PCDHB3Q9Y5E6 SNORA63.1-201ENST00000362493 131 ntBASIC3.73□□□□□ -1.81
PCDHB3Q9Y5E6 SNORD115-2-201ENST00000362842 82 ntBASIC3.73□□□□□ -1.81
PCDHB3Q9Y5E6 SNORD115-20-201ENST00000365099 82 ntBASIC3.73□□□□□ -1.81
PCDHB3Q9Y5E6 MIR218-1-201ENST00000384999 110 ntBASIC3.73□□□□□ -1.81
PCDHB3Q9Y5E6 RNU6-1328P-201ENST00000410938 106 ntBASIC3.73□□□□□ -1.81
PCDHB3Q9Y5E6 RPL23AP83-201ENST00000434984 473 ntBASIC3.73□□□□□ -1.81
PCDHB3Q9Y5E6 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC3.73□□□□□ -1.81
PCDHB3Q9Y5E6 AC069257.2-201ENST00000441819 155 ntBASIC3.73□□□□□ -1.81
PCDHB3Q9Y5E6 AL163195.1-201ENST00000496941 348 ntBASIC3.73□□□□□ -1.81
PCDHB3Q9Y5E6 AC090821.2-201ENST00000523552 176 ntBASIC3.73□□□□□ -1.81
PCDHB3Q9Y5E6 MIR548AE2-201ENST00000583456 67 ntBASIC3.73□□□□□ -1.81
PCDHB3Q9Y5E6 uc_338.25-201ENST00000613756 156 ntBASIC3.73□□□□□ -1.81
PCDHB3Q9Y5E6 MIR376B-201ENST00000614515 100 ntBASIC3.73□□□□□ -1.81
PCDHB3Q9Y5E6 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.73□□□□□ -1.81
PCDHB3Q9Y5E6 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.73□□□□□ -1.81
PCDHB3Q9Y5E6 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
PCDHB3Q9Y5E6 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
PCDHB3Q9Y5E6 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
PCDHB3Q9Y5E6 Y_RNA.470-201ENST00000384307 117 ntBASIC3.72□□□□□ -1.81
PCDHB3Q9Y5E6 MIR95-201ENST00000385072 81 ntBASIC3.72□□□□□ -1.81
PCDHB3Q9Y5E6 RNA5SP482-201ENST00000391269 118 ntBASIC3.72□□□□□ -1.81
PCDHB3Q9Y5E6 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC3.72□□□□□ -1.81
PCDHB3Q9Y5E6 MICF-203ENST00000432679 129 ntBASIC3.72□□□□□ -1.81
PCDHB3Q9Y5E6 AL135938.1-201ENST00000443141 297 ntBASIC3.72□□□□□ -1.81
PCDHB3Q9Y5E6 RNU7-45P-201ENST00000459460 63 ntBASIC3.72□□□□□ -1.81
PCDHB3Q9Y5E6 TRBV12-1-201ENST00000479785 344 ntBASIC3.72□□□□□ -1.81
PCDHB3Q9Y5E6 AC108729.3-201ENST00000513484 108 ntBASIC3.72□□□□□ -1.81
PCDHB3Q9Y5E6 RN7SKP18-201ENST00000516005 275 ntBASIC3.72□□□□□ -1.81
PCDHB3Q9Y5E6 RN7SKP57-201ENST00000517248 293 ntBASIC3.72□□□□□ -1.81
PCDHB3Q9Y5E6 AC024995.1-201ENST00000523014 93 ntBASIC3.72□□□□□ -1.81
PCDHB3Q9Y5E6 AC103810.7-201ENST00000607821 91 ntBASIC3.72□□□□□ -1.81
PCDHB3Q9Y5E6 AC012314.7-201ENST00000619693 93 ntBASIC3.72□□□□□ -1.81
PCDHB3Q9Y5E6 MIR5739-201ENST00000619803 80 ntBASIC3.72□□□□□ -1.81
PCDHB3Q9Y5E6 UCA1.1-201ENST00000620952 75 ntBASIC3.72□□□□□ -1.81
PCDHB3Q9Y5E6 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.72□□□□□ -1.81
PCDHB3Q9Y5E6 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
PCDHB3Q9Y5E6 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.72□□□□□ -1.81
PCDHB3Q9Y5E6 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
PCDHB3Q9Y5E6 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
PCDHB3Q9Y5E6 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.71□□□□□ -1.82
PCDHB3Q9Y5E6 SNORD115-34-201ENST00000362441 82 ntBASIC3.71□□□□□ -1.82
PCDHB3Q9Y5E6 SNORD115-12-201ENST00000362583 82 ntBASIC3.71□□□□□ -1.82
PCDHB3Q9Y5E6 RNA5SP119-201ENST00000362715 117 ntBASIC3.71□□□□□ -1.82
PCDHB3Q9Y5E6 SNORD115-29-201ENST00000362834 82 ntBASIC3.71□□□□□ -1.82
PCDHB3Q9Y5E6 SNORD115-9-201ENST00000362912 82 ntBASIC3.71□□□□□ -1.82
PCDHB3Q9Y5E6 SNORD115-21-201ENST00000362963 81 ntBASIC3.71□□□□□ -1.82
PCDHB3Q9Y5E6 SNORD115-14-201ENST00000363090 81 ntBASIC3.71□□□□□ -1.82
PCDHB3Q9Y5E6 SNORD115-41-201ENST00000363608 82 ntBASIC3.71□□□□□ -1.82
PCDHB3Q9Y5E6 SNORD115-11-201ENST00000363616 82 ntBASIC3.71□□□□□ -1.82
PCDHB3Q9Y5E6 SNORD115-5-201ENST00000363633 82 ntBASIC3.71□□□□□ -1.82
PCDHB3Q9Y5E6 SNORD115-39-201ENST00000363694 82 ntBASIC3.71□□□□□ -1.82
PCDHB3Q9Y5E6 SNORD115-4-201ENST00000363810 82 ntBASIC3.71□□□□□ -1.82
PCDHB3Q9Y5E6 SNORD115-6-201ENST00000363942 82 ntBASIC3.71□□□□□ -1.82
PCDHB3Q9Y5E6 SNORD115-42-201ENST00000364273 82 ntBASIC3.71□□□□□ -1.82
PCDHB3Q9Y5E6 SNORD115-15-201ENST00000364809 81 ntBASIC3.71□□□□□ -1.82
PCDHB3Q9Y5E6 SNORD115-26-201ENST00000365067 82 ntBASIC3.71□□□□□ -1.82
PCDHB3Q9Y5E6 SNORD115-10-201ENST00000365073 81 ntBASIC3.71□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms