Protein–RNA interactions for Protein: Q9UJV9

DDX41, Probable ATP-dependent RNA helicase DDX41, humanhuman

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41Q9UJV9 AC068700.1-201ENST00000565862 3754 ntBASIC2.92□□□□□ -1.94
DDX41Q9UJV9 MIR27B-201ENST00000385129 97 ntBASIC2.91□□□□□ -1.94
DDX41Q9UJV9 RNU6-1228P-201ENST00000391014 107 ntBASIC2.91□□□□□ -1.94
DDX41Q9UJV9 HMGN2P39-201ENST00000398005 273 ntBASIC2.91□□□□□ -1.94
DDX41Q9UJV9 AC069257.2-201ENST00000441819 155 ntBASIC2.91□□□□□ -1.94
DDX41Q9UJV9 AC245047.8-201ENST00000456455 284 ntBASIC2.91□□□□□ -1.94
DDX41Q9UJV9 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.91□□□□□ -1.94
DDX41Q9UJV9 AL358944.1-201ENST00000528537 144 ntBASIC2.91□□□□□ -1.94
DDX41Q9UJV9 AL929325.1-201ENST00000603096 117 ntBASIC2.91□□□□□ -1.94
DDX41Q9UJV9 JPX_2.1-201ENST00000614161 69 ntBASIC2.91□□□□□ -1.94
DDX41Q9UJV9 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.91□□□□□ -1.94
DDX41Q9UJV9 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
DDX41Q9UJV9 Y_RNA.357-201ENST00000365487 109 ntBASIC2.9□□□□□ -1.95
DDX41Q9UJV9 RNY3P5-201ENST00000384127 102 ntBASIC2.9□□□□□ -1.95
DDX41Q9UJV9 SNORA80E-201ENST00000384744 137 ntBASIC2.9□□□□□ -1.95
DDX41Q9UJV9 Y_RNA.572-201ENST00000384757 98 ntBASIC2.9□□□□□ -1.95
DDX41Q9UJV9 RNU6-578P-201ENST00000390980 103 ntBASIC2.9□□□□□ -1.95
DDX41Q9UJV9 PCNPP3-201ENST00000393579 471 ntBASIC2.9□□□□□ -1.95
DDX41Q9UJV9 AC007064.1-201ENST00000412238 351 ntBASIC2.9□□□□□ -1.95
DDX41Q9UJV9 AC099677.2-201ENST00000436385 175 ntBASIC2.9□□□□□ -1.95
DDX41Q9UJV9 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.9□□□□□ -1.95
DDX41Q9UJV9 AC008413.1-201ENST00000511864 177 ntBASIC2.9□□□□□ -1.95
DDX41Q9UJV9 RNA5SP320-201ENST00000516263 124 ntBASIC2.9□□□□□ -1.95
DDX41Q9UJV9 AC091178.2-201ENST00000584401 117 ntBASIC2.9□□□□□ -1.95
DDX41Q9UJV9 CTSLP2-204ENST00000629029 392 ntBASIC2.9□□□□□ -1.95
DDX41Q9UJV9 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
DDX41Q9UJV9 Y_RNA.23-201ENST00000362496 106 ntBASIC2.89□□□□□ -1.95
DDX41Q9UJV9 SNORA33-201ENST00000363664 130 ntBASIC2.89□□□□□ -1.95
DDX41Q9UJV9 RNU6-1019P-201ENST00000364424 107 ntBASIC2.89□□□□□ -1.95
DDX41Q9UJV9 RNU6-275P-201ENST00000364910 107 ntBASIC2.89□□□□□ -1.95
DDX41Q9UJV9 RNU1-52P-201ENST00000384190 164 ntBASIC2.89□□□□□ -1.95
DDX41Q9UJV9 MIR597-201ENST00000384968 97 ntBASIC2.89□□□□□ -1.95
DDX41Q9UJV9 RNU6-1291P-201ENST00000516591 104 ntBASIC2.89□□□□□ -1.95
DDX41Q9UJV9 RNU1-104P-201ENST00000517280 175 ntBASIC2.89□□□□□ -1.95
DDX41Q9UJV9 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC2.89□□□□□ -1.95
DDX41Q9UJV9 AP002004.2-201ENST00000531656 154 ntBASIC2.89□□□□□ -1.95
DDX41Q9UJV9 MIR4446-201ENST00000578505 67 ntBASIC2.89□□□□□ -1.95
DDX41Q9UJV9 SNORD14A-201ENST00000606526 91 ntBASIC2.89□□□□□ -1.95
DDX41Q9UJV9 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.89□□□□□ -1.95
DDX41Q9UJV9 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
DDX41Q9UJV9 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
DDX41Q9UJV9 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.88□□□□□ -1.95
DDX41Q9UJV9 Y_RNA.412-201ENST00000384001 104 ntBASIC2.88□□□□□ -1.95
DDX41Q9UJV9 SNORA70B-201ENST00000384210 135 ntBASIC2.88□□□□□ -1.95
DDX41Q9UJV9 RN7SKP51-201ENST00000410781 304 ntBASIC2.88□□□□□ -1.95
DDX41Q9UJV9 RN7SKP101-201ENST00000411376 320 ntBASIC2.88□□□□□ -1.95
DDX41Q9UJV9 HMGN2P3-201ENST00000433603 273 ntBASIC2.88□□□□□ -1.95
DDX41Q9UJV9 HMGN2P5-201ENST00000436882 273 ntBASIC2.88□□□□□ -1.95
DDX41Q9UJV9 RNU2-56P-201ENST00000516826 190 ntBASIC2.88□□□□□ -1.95
DDX41Q9UJV9 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC2.88□□□□□ -1.95
DDX41Q9UJV9 RPL23AP91-201ENST00000569211 455 ntBASIC2.88□□□□□ -1.95
DDX41Q9UJV9 U4.3-201ENST00000621047 82 ntBASIC2.88□□□□□ -1.95
DDX41Q9UJV9 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
DDX41Q9UJV9 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.87□□□□□ -1.95
DDX41Q9UJV9 MAPK10-266ENST00000641066 6555 ntBASIC2.87□□□□□ -1.95
DDX41Q9UJV9 AL606845.1-201ENST00000404881 255 ntBASIC2.87□□□□□ -1.95
DDX41Q9UJV9 AL121914.1-201ENST00000450188 156 ntBASIC2.87□□□□□ -1.95
DDX41Q9UJV9 AC005840.1-201ENST00000498412 377 ntBASIC2.87□□□□□ -1.95
DDX41Q9UJV9 AC074198.2-201ENST00000508153 258 ntBASIC2.87□□□□□ -1.95
DDX41Q9UJV9 RNU6-453P-201ENST00000516819 85 ntBASIC2.87□□□□□ -1.95
DDX41Q9UJV9 Y_RNA.714-201ENST00000517065 90 ntBASIC2.87□□□□□ -1.95
DDX41Q9UJV9 MIR4529-201ENST00000578110 78 ntBASIC2.87□□□□□ -1.95
DDX41Q9UJV9 MIR5094-201ENST00000578766 85 ntBASIC2.87□□□□□ -1.95
DDX41Q9UJV9 SNORD53-201ENST00000579969 78 ntBASIC2.87□□□□□ -1.95
DDX41Q9UJV9 AC108706.1-201ENST00000611053 297 ntBASIC2.87□□□□□ -1.95
DDX41Q9UJV9 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.87□□□□□ -1.95
DDX41Q9UJV9 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.87□□□□□ -1.95
DDX41Q9UJV9 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.87□□□□□ -1.95
DDX41Q9UJV9 SNORA67.1-201ENST00000364749 141 ntBASIC2.86□□□□□ -1.95
DDX41Q9UJV9 RNU1-51P-201ENST00000365345 176 ntBASIC2.86□□□□□ -1.95
DDX41Q9UJV9 RNU6-728P-201ENST00000365375 104 ntBASIC2.86□□□□□ -1.95
DDX41Q9UJV9 AL603908.1-201ENST00000406098 201 ntBASIC2.86□□□□□ -1.95
DDX41Q9UJV9 MIR1283-2-201ENST00000408621 87 ntBASIC2.86□□□□□ -1.95
DDX41Q9UJV9 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.86□□□□□ -1.95
DDX41Q9UJV9 AL049830.1-201ENST00000468034 425 ntBASIC2.86□□□□□ -1.95
DDX41Q9UJV9 SCARNA8-201ENST00000515924 131 ntBASIC2.86□□□□□ -1.95
DDX41Q9UJV9 RNU1-41P-201ENST00000516161 162 ntBASIC2.86□□□□□ -1.95
DDX41Q9UJV9 RNU1-48P-201ENST00000516400 162 ntBASIC2.86□□□□□ -1.95
DDX41Q9UJV9 AC109810.1-201ENST00000534066 224 ntBASIC2.86□□□□□ -1.95
DDX41Q9UJV9 U1.36-201ENST00000620684 176 ntBASIC2.86□□□□□ -1.95
DDX41Q9UJV9 AC022513.1-201ENST00000624512 117 ntBASIC2.86□□□□□ -1.95
DDX41Q9UJV9 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.86□□□□□ -1.95
DDX41Q9UJV9 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
DDX41Q9UJV9 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
DDX41Q9UJV9 RNA5SP289-201ENST00000362332 137 ntBASIC2.85□□□□□ -1.95
DDX41Q9UJV9 RNU6-1080P-201ENST00000383982 107 ntBASIC2.85□□□□□ -1.95
DDX41Q9UJV9 Y_RNA.441-201ENST00000384123 112 ntBASIC2.85□□□□□ -1.95
DDX41Q9UJV9 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
DDX41Q9UJV9 Y_RNA.587-201ENST00000391210 103 ntBASIC2.85□□□□□ -1.95
DDX41Q9UJV9 UBL5P3-201ENST00000475112 231 ntBASIC2.85□□□□□ -1.95
DDX41Q9UJV9 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.85□□□□□ -1.95
DDX41Q9UJV9 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
DDX41Q9UJV9 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
DDX41Q9UJV9 MIR524-201ENST00000385242 87 ntBASIC2.84□□□□□ -1.95
DDX41Q9UJV9 MT-TT-201ENST00000387460 66 ntBASIC2.84□□□□□ -1.95
DDX41Q9UJV9 SNORA79-201ENST00000408376 140 ntBASIC2.84□□□□□ -1.95
DDX41Q9UJV9 HMGN1P7-201ENST00000491722 313 ntBASIC2.84□□□□□ -1.95
DDX41Q9UJV9 RNA5SP24-201ENST00000516478 95 ntBASIC2.84□□□□□ -1.95
DDX41Q9UJV9 AC084364.2-201ENST00000546924 395 ntBASIC2.84□□□□□ -1.95
DDX41Q9UJV9 AC078899.2-201ENST00000595282 212 ntBASIC2.84□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 168.7 ms