Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 Y_RNA.512-201ENST00000384518 102 ntBASIC1.08□□□□□ -2.24
RSPO3Q9BXY4 SNORD115-46-201ENST00000390982 71 ntBASIC1.08□□□□□ -2.24
RSPO3Q9BXY4 AL590004.1-201ENST00000405321 300 ntBASIC1.08□□□□□ -2.24
RSPO3Q9BXY4 RNA5SP100-201ENST00000410903 110 ntBASIC1.08□□□□□ -2.24
RSPO3Q9BXY4 RNA5SP59-201ENST00000410922 110 ntBASIC1.08□□□□□ -2.24
RSPO3Q9BXY4 AL606517.2-201ENST00000442855 241 ntBASIC1.08□□□□□ -2.24
RSPO3Q9BXY4 LINC01399-202ENST00000458450 244 ntBASIC1.08□□□□□ -2.24
RSPO3Q9BXY4 AC010409.1-201ENST00000487382 476 ntBASIC1.08□□□□□ -2.24
RSPO3Q9BXY4 RNU6-436P-201ENST00000516171 114 ntBASIC1.08□□□□□ -2.24
RSPO3Q9BXY4 RNA5SP480-201ENST00000516840 109 ntBASIC1.08□□□□□ -2.24
RSPO3Q9BXY4 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.08□□□□□ -2.24
RSPO3Q9BXY4 AC023157.2-201ENST00000540596 141 ntBASIC1.08□□□□□ -2.24
RSPO3Q9BXY4 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.08□□□□□ -2.24
RSPO3Q9BXY4 SUB1P4-201ENST00000566062 339 ntBASIC1.08□□□□□ -2.24
RSPO3Q9BXY4 AC005786.1-201ENST00000588553 154 ntBASIC1.08□□□□□ -2.24
RSPO3Q9BXY4 AC073413.2-201ENST00000604332 360 ntBASIC1.08□□□□□ -2.24
RSPO3Q9BXY4 AL360085.1-201ENST00000604713 532 ntBASIC1.08□□□□□ -2.24
RSPO3Q9BXY4 Y_RNA.772-201ENST00000606692 102 ntBASIC1.08□□□□□ -2.24
RSPO3Q9BXY4 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.08□□□□□ -2.24
RSPO3Q9BXY4 AC022709.1-201ENST00000615967 87 ntBASIC1.08□□□□□ -2.24
RSPO3Q9BXY4 MIR6734-201ENST00000621166 68 ntBASIC1.08□□□□□ -2.24
RSPO3Q9BXY4 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.08□□□□□ -2.24
RSPO3Q9BXY4 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
RSPO3Q9BXY4 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.07□□□□□ -2.24
RSPO3Q9BXY4 snoU2_19.2-201ENST00000363024 80 ntBASIC1.07□□□□□ -2.24
RSPO3Q9BXY4 RNU6-112P-201ENST00000363599 104 ntBASIC1.07□□□□□ -2.24
RSPO3Q9BXY4 Y_RNA.183-201ENST00000363882 113 ntBASIC1.07□□□□□ -2.24
RSPO3Q9BXY4 Y_RNA.230-201ENST00000364348 109 ntBASIC1.07□□□□□ -2.24
RSPO3Q9BXY4 RNU1-93P-201ENST00000364704 169 ntBASIC1.07□□□□□ -2.24
RSPO3Q9BXY4 Y_RNA.380-201ENST00000365663 111 ntBASIC1.07□□□□□ -2.24
RSPO3Q9BXY4 SNORD63-201ENST00000384262 68 ntBASIC1.07□□□□□ -2.24
RSPO3Q9BXY4 RNU6-296P-201ENST00000384608 107 ntBASIC1.07□□□□□ -2.24
RSPO3Q9BXY4 RNU1-78P-201ENST00000391248 165 ntBASIC1.07□□□□□ -2.24
RSPO3Q9BXY4 RNU2-54P-201ENST00000410299 190 ntBASIC1.07□□□□□ -2.24
RSPO3Q9BXY4 RPL21P38-201ENST00000418090 167 ntBASIC1.07□□□□□ -2.24
RSPO3Q9BXY4 AC073910.1-201ENST00000445047 438 ntBASIC1.07□□□□□ -2.24
RSPO3Q9BXY4 AC074290.1-201ENST00000448883 135 ntBASIC1.07□□□□□ -2.24
RSPO3Q9BXY4 AC010598.1-201ENST00000510378 103 ntBASIC1.07□□□□□ -2.24
RSPO3Q9BXY4 Y_RNA.721-201ENST00000517207 102 ntBASIC1.07□□□□□ -2.24
RSPO3Q9BXY4 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.07□□□□□ -2.24
RSPO3Q9BXY4 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.07□□□□□ -2.24
RSPO3Q9BXY4 MIR4300-201ENST00000581016 96 ntBASIC1.07□□□□□ -2.24
RSPO3Q9BXY4 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.07□□□□□ -2.24
RSPO3Q9BXY4 U6.73-201ENST00000619194 103 ntBASIC1.07□□□□□ -2.24
RSPO3Q9BXY4 AC245060.5-201ENST00000610778 3293 ntBASIC1.07□□□□□ -2.24
RSPO3Q9BXY4 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
RSPO3Q9BXY4 SNORA27.1-201ENST00000362604 124 ntBASIC1.06□□□□□ -2.24
RSPO3Q9BXY4 RNU1-22P-201ENST00000363334 158 ntBASIC1.06□□□□□ -2.24
RSPO3Q9BXY4 RNU6-770P-201ENST00000363929 105 ntBASIC1.06□□□□□ -2.24
RSPO3Q9BXY4 Y_RNA.329-201ENST00000365209 107 ntBASIC1.06□□□□□ -2.24
RSPO3Q9BXY4 Y_RNA.354-201ENST00000365448 111 ntBASIC1.06□□□□□ -2.24
RSPO3Q9BXY4 SNORA63.7-201ENST00000365579 123 ntBASIC1.06□□□□□ -2.24
RSPO3Q9BXY4 AC117470.1-201ENST00000381974 330 ntBASIC1.06□□□□□ -2.24
RSPO3Q9BXY4 RNU6-1310P-201ENST00000384153 107 ntBASIC1.06□□□□□ -2.24
RSPO3Q9BXY4 Y_RNA.462-201ENST00000384268 102 ntBASIC1.06□□□□□ -2.24
RSPO3Q9BXY4 Y_RNA.526-201ENST00000384572 110 ntBASIC1.06□□□□□ -2.24
RSPO3Q9BXY4 MIR548F4-201ENST00000408515 105 ntBASIC1.06□□□□□ -2.24
RSPO3Q9BXY4 EBAG9P1-201ENST00000418955 543 ntBASIC1.06□□□□□ -2.24
RSPO3Q9BXY4 AC008134.1-201ENST00000420943 193 ntBASIC1.06□□□□□ -2.24
RSPO3Q9BXY4 RPS27P1-201ENST00000450552 247 ntBASIC1.06□□□□□ -2.24
RSPO3Q9BXY4 HSPE1P25-201ENST00000455484 251 ntBASIC1.06□□□□□ -2.24
RSPO3Q9BXY4 AL163195.1-201ENST00000496941 348 ntBASIC1.06□□□□□ -2.24
RSPO3Q9BXY4 MRPS35P2-201ENST00000508242 191 ntBASIC1.06□□□□□ -2.24
RSPO3Q9BXY4 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.06□□□□□ -2.24
RSPO3Q9BXY4 RNU6-155P-201ENST00000516347 100 ntBASIC1.06□□□□□ -2.24
RSPO3Q9BXY4 Y_RNA.720-201ENST00000517166 92 ntBASIC1.06□□□□□ -2.24
RSPO3Q9BXY4 AL442663.2-201ENST00000554385 511 ntBASIC1.06□□□□□ -2.24
RSPO3Q9BXY4 AC008737.2-201ENST00000599446 118 ntBASIC1.06□□□□□ -2.24
RSPO3Q9BXY4 AL355297.3-201ENST00000604082 446 ntBASIC1.06□□□□□ -2.24
RSPO3Q9BXY4 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.05□□□□□ -2.24
RSPO3Q9BXY4 Y_RNA.19-201ENST00000362462 99 ntBASIC1.05□□□□□ -2.24
RSPO3Q9BXY4 SNORD113-8-201ENST00000363497 74 ntBASIC1.05□□□□□ -2.24
RSPO3Q9BXY4 RNU6-117P-201ENST00000365415 107 ntBASIC1.05□□□□□ -2.24
RSPO3Q9BXY4 Y_RNA.422-201ENST00000384054 114 ntBASIC1.05□□□□□ -2.24
RSPO3Q9BXY4 RNU6-939P-201ENST00000384634 107 ntBASIC1.05□□□□□ -2.24
RSPO3Q9BXY4 MIR568-201ENST00000385036 95 ntBASIC1.05□□□□□ -2.24
RSPO3Q9BXY4 RNU6-1109P-201ENST00000391187 107 ntBASIC1.05□□□□□ -2.24
RSPO3Q9BXY4 AL031003.1-201ENST00000404229 172 ntBASIC1.05□□□□□ -2.24
RSPO3Q9BXY4 Y_RNA.602-201ENST00000410535 92 ntBASIC1.05□□□□□ -2.24
RSPO3Q9BXY4 RNU2-61P-201ENST00000411069 191 ntBASIC1.05□□□□□ -2.24
RSPO3Q9BXY4 AL591704.2-201ENST00000421658 181 ntBASIC1.05□□□□□ -2.24
RSPO3Q9BXY4 MTND2P23-201ENST00000422990 651 ntBASIC1.05□□□□□ -2.24
RSPO3Q9BXY4 CST2P1-201ENST00000425770 87 ntBASIC1.05□□□□□ -2.24
RSPO3Q9BXY4 AL135790.2-201ENST00000437701 267 ntBASIC1.05□□□□□ -2.24
RSPO3Q9BXY4 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC1.05□□□□□ -2.24
RSPO3Q9BXY4 DYNLT3P2-201ENST00000442517 295 ntBASIC1.05□□□□□ -2.24
RSPO3Q9BXY4 AL118496.2-201ENST00000448300 230 ntBASIC1.05□□□□□ -2.24
RSPO3Q9BXY4 MTND5P22-201ENST00000458380 195 ntBASIC1.05□□□□□ -2.24
RSPO3Q9BXY4 AC025465.3-201ENST00000510570 311 ntBASIC1.05□□□□□ -2.24
RSPO3Q9BXY4 RNA5SP20-201ENST00000515976 84 ntBASIC1.05□□□□□ -2.24
RSPO3Q9BXY4 RNU6-496P-201ENST00000516145 99 ntBASIC1.05□□□□□ -2.24
RSPO3Q9BXY4 RNY3P15-201ENST00000516297 97 ntBASIC1.05□□□□□ -2.24
RSPO3Q9BXY4 RNU6-63P-201ENST00000516690 95 ntBASIC1.05□□□□□ -2.24
RSPO3Q9BXY4 RNU7-110P-201ENST00000516891 62 ntBASIC1.05□□□□□ -2.24
RSPO3Q9BXY4 RNA5SP437-201ENST00000517249 129 ntBASIC1.05□□□□□ -2.24
RSPO3Q9BXY4 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.05□□□□□ -2.24
RSPO3Q9BXY4 AC011604.1-201ENST00000545978 196 ntBASIC1.05□□□□□ -2.24
RSPO3Q9BXY4 MIR3145-201ENST00000580727 82 ntBASIC1.05□□□□□ -2.24
RSPO3Q9BXY4 AC006504.6-201ENST00000590142 199 ntBASIC1.05□□□□□ -2.24
RSPO3Q9BXY4 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.05□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 139.6 ms