Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 AC016909.1-201ENST00000415916 166 ntBASIC3.23□□□□□ -1.89
SYNGAP1Q96PV0 RN7SL633P-201ENST00000488974 297 ntBASIC3.23□□□□□ -1.89
SYNGAP1Q96PV0 SNORA4.4-201ENST00000515921 135 ntBASIC3.23□□□□□ -1.89
SYNGAP1Q96PV0 AL121890.5-201ENST00000620848 304 ntBASIC3.23□□□□□ -1.89
SYNGAP1Q96PV0 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
SYNGAP1Q96PV0 MIR3914-2-201ENST00000637339 95 ntBASIC3.23□□□□□ -1.89
SYNGAP1Q96PV0 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.23□□□□□ -1.89
SYNGAP1Q96PV0 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
SYNGAP1Q96PV0 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
SYNGAP1Q96PV0 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
SYNGAP1Q96PV0 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
SYNGAP1Q96PV0 RNU1-22P-201ENST00000363334 158 ntBASIC3.22□□□□□ -1.89
SYNGAP1Q96PV0 MIR548A3-201ENST00000385297 97 ntBASIC3.22□□□□□ -1.89
SYNGAP1Q96PV0 RNU6-1186P-201ENST00000410429 97 ntBASIC3.22□□□□□ -1.89
SYNGAP1Q96PV0 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC3.22□□□□□ -1.89
SYNGAP1Q96PV0 AC233266.1-201ENST00000454518 96 ntBASIC3.22□□□□□ -1.89
SYNGAP1Q96PV0 AC097462.1-201ENST00000514125 324 ntBASIC3.22□□□□□ -1.89
SYNGAP1Q96PV0 SNORD33.1-201ENST00000516213 88 ntBASIC3.22□□□□□ -1.89
SYNGAP1Q96PV0 RNU1-104P-201ENST00000517280 175 ntBASIC3.22□□□□□ -1.89
SYNGAP1Q96PV0 AC242852.1-201ENST00000612151 96 ntBASIC3.22□□□□□ -1.89
SYNGAP1Q96PV0 AL353997.5-201ENST00000618886 171 ntBASIC3.22□□□□□ -1.89
SYNGAP1Q96PV0 AC244015.1-201ENST00000622301 99 ntBASIC3.22□□□□□ -1.89
SYNGAP1Q96PV0 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC3.22□□□□□ -1.89
SYNGAP1Q96PV0 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
SYNGAP1Q96PV0 AC009487.2-201ENST00000420969 6821 ntBASIC3.22□□□□□ -1.89
SYNGAP1Q96PV0 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
SYNGAP1Q96PV0 CD24P4-201ENST00000382840 243 ntBASIC3.21□□□□□ -1.89
SYNGAP1Q96PV0 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC3.21□□□□□ -1.89
SYNGAP1Q96PV0 SNORA26-201ENST00000391286 122 ntBASIC3.21□□□□□ -1.89
SYNGAP1Q96PV0 MIR1289-2-201ENST00000408360 111 ntBASIC3.21□□□□□ -1.89
SYNGAP1Q96PV0 Y_RNA.630-201ENST00000411370 108 ntBASIC3.21□□□□□ -1.89
SYNGAP1Q96PV0 TRIAP1P1-201ENST00000427062 225 ntBASIC3.21□□□□□ -1.89
SYNGAP1Q96PV0 HMGN2P34-201ENST00000437647 269 ntBASIC3.21□□□□□ -1.89
SYNGAP1Q96PV0 AP004217.1-201ENST00000480579 346 ntBASIC3.21□□□□□ -1.89
SYNGAP1Q96PV0 SNORD77.4-201ENST00000516158 81 ntBASIC3.21□□□□□ -1.89
SYNGAP1Q96PV0 RNA5SP153-201ENST00000516498 76 ntBASIC3.21□□□□□ -1.89
SYNGAP1Q96PV0 RNU7-149P-201ENST00000516739 59 ntBASIC3.21□□□□□ -1.89
SYNGAP1Q96PV0 AL670379.3-201ENST00000605040 251 ntBASIC3.21□□□□□ -1.89
SYNGAP1Q96PV0 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.21□□□□□ -1.9
SYNGAP1Q96PV0 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.21□□□□□ -1.9
SYNGAP1Q96PV0 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
SYNGAP1Q96PV0 RNU6-859P-201ENST00000362728 107 ntBASIC3.2□□□□□ -1.9
SYNGAP1Q96PV0 RNU1-72P-201ENST00000362976 153 ntBASIC3.2□□□□□ -1.9
SYNGAP1Q96PV0 RNU6-508P-201ENST00000363231 103 ntBASIC3.2□□□□□ -1.9
SYNGAP1Q96PV0 RNU6-309P-201ENST00000364573 106 ntBASIC3.2□□□□□ -1.9
SYNGAP1Q96PV0 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
SYNGAP1Q96PV0 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.2□□□□□ -1.9
SYNGAP1Q96PV0 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC3.2□□□□□ -1.9
SYNGAP1Q96PV0 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC3.2□□□□□ -1.9
SYNGAP1Q96PV0 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC3.2□□□□□ -1.9
SYNGAP1Q96PV0 AC009487.4-201ENST00000624969 3585 ntBASIC3.2□□□□□ -1.9
SYNGAP1Q96PV0 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC3.2□□□□□ -1.9
SYNGAP1Q96PV0 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.2□□□□□ -1.9
SYNGAP1Q96PV0 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
SYNGAP1Q96PV0 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SYNGAP1Q96PV0 RNA5SP139-201ENST00000364340 117 ntBASIC3.19□□□□□ -1.9
SYNGAP1Q96PV0 AL138827.1-201ENST00000402666 306 ntBASIC3.19□□□□□ -1.9
SYNGAP1Q96PV0 FO393413.1-201ENST00000402892 195 ntBASIC3.19□□□□□ -1.9
SYNGAP1Q96PV0 RNA5SP21-201ENST00000410917 96 ntBASIC3.19□□□□□ -1.9
SYNGAP1Q96PV0 OR9P1P-201ENST00000496431 281 ntBASIC3.19□□□□□ -1.9
SYNGAP1Q96PV0 AC096725.1-201ENST00000514266 313 ntBASIC3.19□□□□□ -1.9
SYNGAP1Q96PV0 RNU2-34P-201ENST00000516534 121 ntBASIC3.19□□□□□ -1.9
SYNGAP1Q96PV0 RNU6-1096P-201ENST00000517089 102 ntBASIC3.19□□□□□ -1.9
SYNGAP1Q96PV0 SCARNA3-201ENST00000517097 143 ntBASIC3.19□□□□□ -1.9
SYNGAP1Q96PV0 PRELID2P1-201ENST00000552837 301 ntBASIC3.19□□□□□ -1.9
SYNGAP1Q96PV0 AL160236.1-201ENST00000556317 195 ntBASIC3.19□□□□□ -1.9
SYNGAP1Q96PV0 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.19□□□□□ -1.9
SYNGAP1Q96PV0 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC3.19□□□□□ -1.9
SYNGAP1Q96PV0 MIR5739-201ENST00000619803 80 ntBASIC3.19□□□□□ -1.9
SYNGAP1Q96PV0 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SYNGAP1Q96PV0 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
SYNGAP1Q96PV0 RNU6-647P-201ENST00000364243 107 ntBASIC3.19□□□□□ -1.9
SYNGAP1Q96PV0 MIR196B-201ENST00000384852 84 ntBASIC3.19□□□□□ -1.9
SYNGAP1Q96PV0 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.19□□□□□ -1.9
SYNGAP1Q96PV0 RPL39P40-201ENST00000445481 146 ntBASIC3.19□□□□□ -1.9
SYNGAP1Q96PV0 SNORD11-201ENST00000459124 84 ntBASIC3.19□□□□□ -1.9
SYNGAP1Q96PV0 SCARNA11.3-201ENST00000517276 130 ntBASIC3.19□□□□□ -1.9
SYNGAP1Q96PV0 MIR4679-2-201ENST00000578358 77 ntBASIC3.19□□□□□ -1.9
SYNGAP1Q96PV0 AC022217.4-201ENST00000604389 163 ntBASIC3.19□□□□□ -1.9
SYNGAP1Q96PV0 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC3.19□□□□□ -1.9
SYNGAP1Q96PV0 AL353746.1-201ENST00000566293 6881 ntBASIC3.18□□□□□ -1.9
SYNGAP1Q96PV0 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
SYNGAP1Q96PV0 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
SYNGAP1Q96PV0 Y_RNA.486-201ENST00000384398 107 ntBASIC3.18□□□□□ -1.9
SYNGAP1Q96PV0 SNORD116-21-201ENST00000384507 92 ntBASIC3.18□□□□□ -1.9
SYNGAP1Q96PV0 RNU6-1328P-201ENST00000410938 106 ntBASIC3.18□□□□□ -1.9
SYNGAP1Q96PV0 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.18□□□□□ -1.9
SYNGAP1Q96PV0 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC3.18□□□□□ -1.9
SYNGAP1Q96PV0 AC245102.2-201ENST00000448956 180 ntBASIC3.18□□□□□ -1.9
SYNGAP1Q96PV0 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.18□□□□□ -1.9
SYNGAP1Q96PV0 RNU6-589P-201ENST00000516485 107 ntBASIC3.18□□□□□ -1.9
SYNGAP1Q96PV0 RNU6-365P-201ENST00000517113 106 ntBASIC3.18□□□□□ -1.9
SYNGAP1Q96PV0 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.18□□□□□ -1.9
SYNGAP1Q96PV0 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.18□□□□□ -1.9
SYNGAP1Q96PV0 AC090115.4-201ENST00000609970 188 ntBASIC3.18□□□□□ -1.9
SYNGAP1Q96PV0 ICE2P2-201ENST00000483823 2787 ntBASIC3.17□□□□□ -1.9
SYNGAP1Q96PV0 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
SYNGAP1Q96PV0 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
SYNGAP1Q96PV0 RNU1-112P-201ENST00000364401 164 ntBASIC3.17□□□□□ -1.9
SYNGAP1Q96PV0 MIR592-201ENST00000384959 97 ntBASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 131.5 ms