Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
TRIM47Q96LD4 RNU6-661P-201ENST00000362409 107 ntBASIC3.86□□□□□ -1.79
TRIM47Q96LD4 SNORD116-10-201ENST00000363791 102 ntBASIC3.86□□□□□ -1.79
TRIM47Q96LD4 RNU6-1189P-201ENST00000383958 107 ntBASIC3.86□□□□□ -1.79
TRIM47Q96LD4 AL513477.1-202ENST00000417061 214 ntBASIC3.86□□□□□ -1.79
TRIM47Q96LD4 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC3.86□□□□□ -1.79
TRIM47Q96LD4 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC3.86□□□□□ -1.79
TRIM47Q96LD4 SNORA70.19-201ENST00000516717 90 ntBASIC3.86□□□□□ -1.79
TRIM47Q96LD4 MIR3683-201ENST00000580847 82 ntBASIC3.86□□□□□ -1.79
TRIM47Q96LD4 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC3.86□□□□□ -1.79
TRIM47Q96LD4 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.86□□□□□ -1.79
TRIM47Q96LD4 RNU6-91P-201ENST00000607774 107 ntBASIC3.86□□□□□ -1.79
TRIM47Q96LD4 AC064859.1-201ENST00000624741 174 ntBASIC3.86□□□□□ -1.79
TRIM47Q96LD4 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.86□□□□□ -1.79
TRIM47Q96LD4 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
TRIM47Q96LD4 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
TRIM47Q96LD4 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
TRIM47Q96LD4 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
TRIM47Q96LD4 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.85□□□□□ -1.79
TRIM47Q96LD4 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
TRIM47Q96LD4 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.85□□□□□ -1.79
TRIM47Q96LD4 MIR30E-201ENST00000362104 92 ntBASIC3.85□□□□□ -1.79
TRIM47Q96LD4 SNORD115-19-201ENST00000363098 82 ntBASIC3.85□□□□□ -1.79
TRIM47Q96LD4 SNORD115-18-201ENST00000363293 82 ntBASIC3.85□□□□□ -1.79
TRIM47Q96LD4 SNORD115-17-201ENST00000364612 82 ntBASIC3.85□□□□□ -1.79
TRIM47Q96LD4 Y_RNA.410-201ENST00000383992 113 ntBASIC3.85□□□□□ -1.79
TRIM47Q96LD4 RNU6-975P-201ENST00000384296 105 ntBASIC3.85□□□□□ -1.79
TRIM47Q96LD4 RNU6-748P-201ENST00000384648 107 ntBASIC3.85□□□□□ -1.79
TRIM47Q96LD4 Y_RNA.621-201ENST00000411065 96 ntBASIC3.85□□□□□ -1.79
TRIM47Q96LD4 AL353813.1-201ENST00000440700 253 ntBASIC3.85□□□□□ -1.79
TRIM47Q96LD4 RNU7-170P-201ENST00000459303 61 ntBASIC3.85□□□□□ -1.79
TRIM47Q96LD4 RNU6-928P-201ENST00000516876 104 ntBASIC3.85□□□□□ -1.79
TRIM47Q96LD4 AL513534.2-201ENST00000603836 250 ntBASIC3.85□□□□□ -1.79
TRIM47Q96LD4 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC3.85□□□□□ -1.79
TRIM47Q96LD4 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.85□□□□□ -1.79
TRIM47Q96LD4 TNPO1P3-201ENST00000436471 2662 ntBASIC3.85□□□□□ -1.79
TRIM47Q96LD4 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.85□□□□□ -1.79
TRIM47Q96LD4 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.84□□□□□ -1.79
TRIM47Q96LD4 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.84□□□□□ -1.79
TRIM47Q96LD4 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
TRIM47Q96LD4 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
TRIM47Q96LD4 RNU1-96P-201ENST00000364163 162 ntBASIC3.84□□□□□ -1.79
TRIM47Q96LD4 RNU2-40P-201ENST00000410833 196 ntBASIC3.84□□□□□ -1.79
TRIM47Q96LD4 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.84□□□□□ -1.79
TRIM47Q96LD4 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
TRIM47Q96LD4 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
TRIM47Q96LD4 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
TRIM47Q96LD4 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
TRIM47Q96LD4 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
TRIM47Q96LD4 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
TRIM47Q96LD4 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.83□□□□□ -1.8
TRIM47Q96LD4 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
TRIM47Q96LD4 MIR449A-201ENST00000362113 91 ntBASIC3.83□□□□□ -1.8
TRIM47Q96LD4 RNU6-633P-201ENST00000362612 103 ntBASIC3.83□□□□□ -1.8
TRIM47Q96LD4 AP000567.1-201ENST00000406413 156 ntBASIC3.83□□□□□ -1.8
TRIM47Q96LD4 AC009414.1-201ENST00000427200 443 ntBASIC3.83□□□□□ -1.8
TRIM47Q96LD4 RNU7-14P-201ENST00000459331 62 ntBASIC3.83□□□□□ -1.8
TRIM47Q96LD4 HMGN1P7-201ENST00000491722 313 ntBASIC3.83□□□□□ -1.8
TRIM47Q96LD4 RNU6-1231P-201ENST00000517185 103 ntBASIC3.83□□□□□ -1.8
TRIM47Q96LD4 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.83□□□□□ -1.8
TRIM47Q96LD4 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
TRIM47Q96LD4 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
TRIM47Q96LD4 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
TRIM47Q96LD4 FAM35BP-202ENST00000497389 3337 ntBASIC3.83□□□□□ -1.8
TRIM47Q96LD4 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
TRIM47Q96LD4 SNORD32B-201ENST00000364460 84 ntBASIC3.82□□□□□ -1.8
TRIM47Q96LD4 SNORD58A-201ENST00000383875 65 ntBASIC3.82□□□□□ -1.8
TRIM47Q96LD4 RNU6-679P-201ENST00000391003 106 ntBASIC3.82□□□□□ -1.8
TRIM47Q96LD4 AC004223.1-201ENST00000479840 271 ntBASIC3.82□□□□□ -1.8
TRIM47Q96LD4 RPS29P21-201ENST00000496272 170 ntBASIC3.82□□□□□ -1.8
TRIM47Q96LD4 RNA5SP468-201ENST00000516782 93 ntBASIC3.82□□□□□ -1.8
TRIM47Q96LD4 RNU6-1096P-201ENST00000517089 102 ntBASIC3.82□□□□□ -1.8
TRIM47Q96LD4 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.82□□□□□ -1.8
TRIM47Q96LD4 MIR4438-201ENST00000585271 93 ntBASIC3.82□□□□□ -1.8
TRIM47Q96LD4 ELOCP29-201ENST00000588193 334 ntBASIC3.82□□□□□ -1.8
TRIM47Q96LD4 AC022217.4-201ENST00000604389 163 ntBASIC3.82□□□□□ -1.8
TRIM47Q96LD4 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
TRIM47Q96LD4 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.82□□□□□ -1.8
TRIM47Q96LD4 Y_RNA.377-201ENST00000365644 108 ntBASIC3.81□□□□□ -1.8
TRIM47Q96LD4 RNA5SP129-201ENST00000410276 118 ntBASIC3.81□□□□□ -1.8
TRIM47Q96LD4 SNORA7.5-201ENST00000410672 110 ntBASIC3.81□□□□□ -1.8
TRIM47Q96LD4 AC016909.1-201ENST00000415916 166 ntBASIC3.81□□□□□ -1.8
TRIM47Q96LD4 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.81□□□□□ -1.8
TRIM47Q96LD4 RN7SL863P-201ENST00000462370 296 ntBASIC3.81□□□□□ -1.8
TRIM47Q96LD4 AC010401.1-201ENST00000463867 348 ntBASIC3.81□□□□□ -1.8
TRIM47Q96LD4 MIR2276-201ENST00000516886 89 ntBASIC3.81□□□□□ -1.8
TRIM47Q96LD4 MIR6715A-201ENST00000615929 79 ntBASIC3.81□□□□□ -1.8
TRIM47Q96LD4 AC010680.1-201ENST00000590024 3590 ntBASIC3.81□□□□□ -1.8
TRIM47Q96LD4 AC007496.3-201ENST00000624987 3443 ntBASIC3.81□□□□□ -1.8
TRIM47Q96LD4 AC002546.1-201ENST00000588041 2504 ntBASIC3.81□□□□□ -1.8
TRIM47Q96LD4 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
TRIM47Q96LD4 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
TRIM47Q96LD4 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
TRIM47Q96LD4 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
TRIM47Q96LD4 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
TRIM47Q96LD4 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.8□□□□□ -1.8
TRIM47Q96LD4 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC3.8□□□□□ -1.8
TRIM47Q96LD4 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.8□□□□□ -1.8
TRIM47Q96LD4 RNU6-50P-201ENST00000362356 103 ntBASIC3.8□□□□□ -1.8
TRIM47Q96LD4 RNU4-16P-201ENST00000364737 141 ntBASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 116.3 ms