Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
LRCH3Q96II8 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
LRCH3Q96II8 CEP170P1-201ENST00000502249 4587 ntBASIC3.96□□□□□ -1.78
LRCH3Q96II8 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
LRCH3Q96II8 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
LRCH3Q96II8 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
LRCH3Q96II8 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC3.95□□□□□ -1.78
LRCH3Q96II8 AL133412.1-201ENST00000380194 2992 ntBASIC3.95□□□□□ -1.78
LRCH3Q96II8 Y_RNA.171-201ENST00000363760 102 ntBASIC3.95□□□□□ -1.78
LRCH3Q96II8 SNORA1.1-201ENST00000364671 133 ntBASIC3.95□□□□□ -1.78
LRCH3Q96II8 Y_RNA.332-201ENST00000365271 113 ntBASIC3.95□□□□□ -1.78
LRCH3Q96II8 Y_RNA.609-201ENST00000410669 89 ntBASIC3.95□□□□□ -1.78
LRCH3Q96II8 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.95□□□□□ -1.78
LRCH3Q96II8 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.95□□□□□ -1.78
LRCH3Q96II8 AL109933.2-201ENST00000452651 260 ntBASIC3.95□□□□□ -1.78
LRCH3Q96II8 AL360157.1-201ENST00000565962 87 ntBASIC3.95□□□□□ -1.78
LRCH3Q96II8 MIR4276-201ENST00000584832 70 ntBASIC3.95□□□□□ -1.78
LRCH3Q96II8 AC145423.2-201ENST00000610631 239 ntBASIC3.95□□□□□ -1.78
LRCH3Q96II8 MIR376B-201ENST00000614515 100 ntBASIC3.95□□□□□ -1.78
LRCH3Q96II8 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC3.95□□□□□ -1.78
LRCH3Q96II8 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.95□□□□□ -1.78
LRCH3Q96II8 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
LRCH3Q96II8 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
LRCH3Q96II8 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.95□□□□□ -1.78
LRCH3Q96II8 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
LRCH3Q96II8 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.94□□□□□ -1.78
LRCH3Q96II8 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
LRCH3Q96II8 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC3.94□□□□□ -1.78
LRCH3Q96II8 Y_RNA.336-201ENST00000365307 109 ntBASIC3.94□□□□□ -1.78
LRCH3Q96II8 SNORA27-201ENST00000384323 126 ntBASIC3.94□□□□□ -1.78
LRCH3Q96II8 MIR1270-201ENST00000459320 83 ntBASIC3.94□□□□□ -1.78
LRCH3Q96II8 RNU6-998P-201ENST00000515894 101 ntBASIC3.94□□□□□ -1.78
LRCH3Q96II8 MIR5004-201ENST00000579078 107 ntBASIC3.94□□□□□ -1.78
LRCH3Q96II8 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.94□□□□□ -1.78
LRCH3Q96II8 U4atac.1-201ENST00000618345 95 ntBASIC3.94□□□□□ -1.78
LRCH3Q96II8 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.94□□□□□ -1.78
LRCH3Q96II8 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.94□□□□□ -1.78
LRCH3Q96II8 AC092881.1-201ENST00000638218 2733 ntBASIC3.93□□□□□ -1.78
LRCH3Q96II8 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
LRCH3Q96II8 RNA5SP502-201ENST00000362694 119 ntBASIC3.93□□□□□ -1.78
LRCH3Q96II8 SNORD17-201ENST00000390930 237 ntBASIC3.93□□□□□ -1.78
LRCH3Q96II8 SNORD77B-201ENST00000391112 67 ntBASIC3.93□□□□□ -1.78
LRCH3Q96II8 HSPE1P26-201ENST00000405341 275 ntBASIC3.93□□□□□ -1.78
LRCH3Q96II8 RNA5SP239-201ENST00000410218 129 ntBASIC3.93□□□□□ -1.78
LRCH3Q96II8 AC069257.2-201ENST00000441819 155 ntBASIC3.93□□□□□ -1.78
LRCH3Q96II8 RNU7-113P-201ENST00000459273 62 ntBASIC3.93□□□□□ -1.78
LRCH3Q96II8 RNU6-991P-201ENST00000516168 107 ntBASIC3.93□□□□□ -1.78
LRCH3Q96II8 RNU6-1258P-201ENST00000516911 111 ntBASIC3.93□□□□□ -1.78
LRCH3Q96II8 SCARNA3-201ENST00000517097 143 ntBASIC3.93□□□□□ -1.78
LRCH3Q96II8 MIR7851-201ENST00000610611 160 ntBASIC3.93□□□□□ -1.78
LRCH3Q96II8 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
LRCH3Q96II8 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
LRCH3Q96II8 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.93□□□□□ -1.78
LRCH3Q96II8 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
LRCH3Q96II8 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.93□□□□□ -1.78
LRCH3Q96II8 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
LRCH3Q96II8 SNORD115-27-201ENST00000364430 82 ntBASIC3.92□□□□□ -1.78
LRCH3Q96II8 RNU6-546P-201ENST00000383991 107 ntBASIC3.92□□□□□ -1.78
LRCH3Q96II8 SNORA44-201ENST00000384584 132 ntBASIC3.92□□□□□ -1.78
LRCH3Q96II8 SNORA80E-201ENST00000384744 137 ntBASIC3.92□□□□□ -1.78
LRCH3Q96II8 MIR767-201ENST00000390228 109 ntBASIC3.92□□□□□ -1.78
LRCH3Q96II8 AP000567.1-201ENST00000406413 156 ntBASIC3.92□□□□□ -1.78
LRCH3Q96II8 AC090844.1-201ENST00000422019 156 ntBASIC3.92□□□□□ -1.78
LRCH3Q96II8 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.92□□□□□ -1.78
LRCH3Q96II8 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.92□□□□□ -1.78
LRCH3Q96II8 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.92□□□□□ -1.78
LRCH3Q96II8 AC108729.3-201ENST00000513484 108 ntBASIC3.92□□□□□ -1.78
LRCH3Q96II8 RNU1-142P-201ENST00000516682 145 ntBASIC3.92□□□□□ -1.78
LRCH3Q96II8 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.92□□□□□ -1.78
LRCH3Q96II8 MIR4769-201ENST00000584126 77 ntBASIC3.92□□□□□ -1.78
LRCH3Q96II8 MIR338-201ENST00000636369 67 ntBASIC3.92□□□□□ -1.78
LRCH3Q96II8 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC3.92□□□□□ -1.78
LRCH3Q96II8 LINC02471-203ENST00000641941 4752 ntBASIC3.91□□□□□ -1.78
LRCH3Q96II8 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
LRCH3Q96II8 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
LRCH3Q96II8 Y_RNA.241-201ENST00000364470 117 ntBASIC3.91□□□□□ -1.78
LRCH3Q96II8 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
LRCH3Q96II8 RNU7-96P-201ENST00000459535 64 ntBASIC3.91□□□□□ -1.78
LRCH3Q96II8 RNU6-1041P-201ENST00000516254 102 ntBASIC3.91□□□□□ -1.78
LRCH3Q96II8 AC091564.4-201ENST00000533934 2194 ntBASIC3.91□□□□□ -1.78
LRCH3Q96II8 MIR548AE2-201ENST00000583456 67 ntBASIC3.91□□□□□ -1.78
LRCH3Q96II8 SNORA62.6-201ENST00000606322 83 ntBASIC3.91□□□□□ -1.78
LRCH3Q96II8 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.91□□□□□ -1.78
LRCH3Q96II8 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
LRCH3Q96II8 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
LRCH3Q96II8 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.9□□□□□ -1.78
LRCH3Q96II8 MIR422A-201ENST00000362286 90 ntBASIC3.9□□□□□ -1.79
LRCH3Q96II8 Y_RNA.247-201ENST00000364500 92 ntBASIC3.9□□□□□ -1.79
LRCH3Q96II8 RNU6-524P-201ENST00000384270 107 ntBASIC3.9□□□□□ -1.79
LRCH3Q96II8 AC009969.1-201ENST00000438726 172 ntBASIC3.9□□□□□ -1.79
LRCH3Q96II8 RNU6-86P-201ENST00000606534 107 ntBASIC3.9□□□□□ -1.79
LRCH3Q96II8 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
LRCH3Q96II8 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
LRCH3Q96II8 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
LRCH3Q96II8 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.9□□□□□ -1.79
LRCH3Q96II8 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC3.9□□□□□ -1.79
LRCH3Q96II8 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.9□□□□□ -1.79
LRCH3Q96II8 SNORD115-2-201ENST00000362842 82 ntBASIC3.89□□□□□ -1.79
LRCH3Q96II8 RNA5SP322-201ENST00000363617 119 ntBASIC3.89□□□□□ -1.79
LRCH3Q96II8 RNU6-457P-201ENST00000363999 107 ntBASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 161.9 ms