Protein–RNA interactions for Protein: Q96HJ5

MS4A3, Membrane-spanning 4-domains subfamily A member 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A3Q96HJ5 AL355297.2-201ENST00000604792 129 ntBASIC4.04□□□□□ -1.76
MS4A3Q96HJ5 MIR6780A-201ENST00000615089 68 ntBASIC4.04□□□□□ -1.76
MS4A3Q96HJ5 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.04□□□□□ -1.76
MS4A3Q96HJ5 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
MS4A3Q96HJ5 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.04□□□□□ -1.76
MS4A3Q96HJ5 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
MS4A3Q96HJ5 MIR337-201ENST00000362281 93 ntBASIC4.03□□□□□ -1.76
MS4A3Q96HJ5 Y_RNA.371-201ENST00000365591 113 ntBASIC4.03□□□□□ -1.76
MS4A3Q96HJ5 RNU6-950P-201ENST00000384651 107 ntBASIC4.03□□□□□ -1.76
MS4A3Q96HJ5 MIR93-201ENST00000385024 80 ntBASIC4.03□□□□□ -1.76
MS4A3Q96HJ5 MIR513A2-201ENST00000385249 127 ntBASIC4.03□□□□□ -1.76
MS4A3Q96HJ5 MIR921-201ENST00000401133 56 ntBASIC4.03□□□□□ -1.76
MS4A3Q96HJ5 RPS16P5-201ENST00000406501 404 ntBASIC4.03□□□□□ -1.76
MS4A3Q96HJ5 RNA5SP237-201ENST00000410414 113 ntBASIC4.03□□□□□ -1.76
MS4A3Q96HJ5 RNU2-37P-201ENST00000410695 177 ntBASIC4.03□□□□□ -1.76
MS4A3Q96HJ5 AC004552.1-201ENST00000419089 348 ntBASIC4.03□□□□□ -1.76
MS4A3Q96HJ5 HSPE1P9-201ENST00000440046 311 ntBASIC4.03□□□□□ -1.76
MS4A3Q96HJ5 RPS29P33-201ENST00000456717 146 ntBASIC4.03□□□□□ -1.76
MS4A3Q96HJ5 RPS26P3-201ENST00000470205 348 ntBASIC4.03□□□□□ -1.76
MS4A3Q96HJ5 AC090543.2-201ENST00000483963 348 ntBASIC4.03□□□□□ -1.76
MS4A3Q96HJ5 AC004057.1-201ENST00000485827 348 ntBASIC4.03□□□□□ -1.76
MS4A3Q96HJ5 RNA5SP446-201ENST00000515955 82 ntBASIC4.03□□□□□ -1.76
MS4A3Q96HJ5 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC4.03□□□□□ -1.76
MS4A3Q96HJ5 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
MS4A3Q96HJ5 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
MS4A3Q96HJ5 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
MS4A3Q96HJ5 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.03□□□□□ -1.76
MS4A3Q96HJ5 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.03□□□□□ -1.76
MS4A3Q96HJ5 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.77
MS4A3Q96HJ5 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.02□□□□□ -1.77
MS4A3Q96HJ5 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC4.02□□□□□ -1.77
MS4A3Q96HJ5 SNORA71.2-201ENST00000364941 134 ntBASIC4.02□□□□□ -1.77
MS4A3Q96HJ5 RNA5SP151-201ENST00000365632 117 ntBASIC4.02□□□□□ -1.77
MS4A3Q96HJ5 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
MS4A3Q96HJ5 RNU6-808P-201ENST00000391233 108 ntBASIC4.02□□□□□ -1.77
MS4A3Q96HJ5 RNA5SP39-201ENST00000411245 120 ntBASIC4.02□□□□□ -1.77
MS4A3Q96HJ5 AC027119.1-201ENST00000440877 241 ntBASIC4.02□□□□□ -1.77
MS4A3Q96HJ5 RPS26P28-201ENST00000470806 348 ntBASIC4.02□□□□□ -1.77
MS4A3Q96HJ5 S100A11P1-201ENST00000477525 312 ntBASIC4.02□□□□□ -1.77
MS4A3Q96HJ5 AC138749.4-201ENST00000563970 127 ntBASIC4.02□□□□□ -1.77
MS4A3Q96HJ5 MIR4700-201ENST00000578311 74 ntBASIC4.02□□□□□ -1.77
MS4A3Q96HJ5 RN7SL690P-201ENST00000582087 240 ntBASIC4.02□□□□□ -1.77
MS4A3Q96HJ5 AL161722.3-201ENST00000605789 2983 ntBASIC4.02□□□□□ -1.77
MS4A3Q96HJ5 RN7SL722P-201ENST00000617780 284 ntBASIC4.02□□□□□ -1.77
MS4A3Q96HJ5 RN7SL565P-201ENST00000618246 284 ntBASIC4.02□□□□□ -1.77
MS4A3Q96HJ5 RNA5SP196-201ENST00000625967 102 ntBASIC4.02□□□□□ -1.77
MS4A3Q96HJ5 SCARNA15.3-201ENST00000626315 122 ntBASIC4.02□□□□□ -1.77
MS4A3Q96HJ5 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
MS4A3Q96HJ5 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.02□□□□□ -1.77
MS4A3Q96HJ5 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
MS4A3Q96HJ5 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
MS4A3Q96HJ5 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
MS4A3Q96HJ5 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.01□□□□□ -1.77
MS4A3Q96HJ5 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC4.01□□□□□ -1.77
MS4A3Q96HJ5 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.01□□□□□ -1.77
MS4A3Q96HJ5 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC4.01□□□□□ -1.77
MS4A3Q96HJ5 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
MS4A3Q96HJ5 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
MS4A3Q96HJ5 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.01□□□□□ -1.77
MS4A3Q96HJ5 SNORD115-3-201ENST00000363100 82 ntBASIC4.01□□□□□ -1.77
MS4A3Q96HJ5 RNA5SP493-201ENST00000364115 91 ntBASIC4.01□□□□□ -1.77
MS4A3Q96HJ5 SNORD115-22-201ENST00000364456 82 ntBASIC4.01□□□□□ -1.77
MS4A3Q96HJ5 SNORA70F-201ENST00000384142 135 ntBASIC4.01□□□□□ -1.77
MS4A3Q96HJ5 MIR192-201ENST00000384915 110 ntBASIC4.01□□□□□ -1.77
MS4A3Q96HJ5 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
MS4A3Q96HJ5 BX276092.1-201ENST00000427368 251 ntBASIC4.01□□□□□ -1.77
MS4A3Q96HJ5 RPS29P22-201ENST00000472363 168 ntBASIC4.01□□□□□ -1.77
MS4A3Q96HJ5 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.01□□□□□ -1.77
MS4A3Q96HJ5 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC4.01□□□□□ -1.77
MS4A3Q96HJ5 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC4.01□□□□□ -1.77
MS4A3Q96HJ5 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
MS4A3Q96HJ5 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.01□□□□□ -1.77
MS4A3Q96HJ5 MFSD8-242ENST00000641690 4199 ntBASIC4.01□□□□□ -1.77
MS4A3Q96HJ5 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.01□□□□□ -1.77
MS4A3Q96HJ5 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4□□□□□ -1.77
MS4A3Q96HJ5 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC4□□□□□ -1.77
MS4A3Q96HJ5 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
MS4A3Q96HJ5 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4□□□□□ -1.77
MS4A3Q96HJ5 RNU6-949P-201ENST00000384040 107 ntBASIC4□□□□□ -1.77
MS4A3Q96HJ5 RNA5SP397-201ENST00000391323 118 ntBASIC4□□□□□ -1.77
MS4A3Q96HJ5 RNU2-7P-201ENST00000410794 178 ntBASIC4□□□□□ -1.77
MS4A3Q96HJ5 RNA5SP497-201ENST00000516081 97 ntBASIC4□□□□□ -1.77
MS4A3Q96HJ5 MIR3169-201ENST00000578032 83 ntBASIC4□□□□□ -1.77
MS4A3Q96HJ5 MIR4330-201ENST00000579077 105 ntBASIC4□□□□□ -1.77
MS4A3Q96HJ5 MIR6820-201ENST00000611508 62 ntBASIC4□□□□□ -1.77
MS4A3Q96HJ5 AL662814.1-201ENST00000617364 121 ntBASIC4□□□□□ -1.77
MS4A3Q96HJ5 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4□□□□□ -1.77
MS4A3Q96HJ5 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC4□□□□□ -1.77
MS4A3Q96HJ5 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
MS4A3Q96HJ5 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC4□□□□□ -1.77
MS4A3Q96HJ5 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
MS4A3Q96HJ5 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC3.99□□□□□ -1.77
MS4A3Q96HJ5 MIR516A2-201ENST00000384888 90 ntBASIC3.99□□□□□ -1.77
MS4A3Q96HJ5 MIR659-201ENST00000384963 97 ntBASIC3.99□□□□□ -1.77
MS4A3Q96HJ5 MIR516A1-201ENST00000385033 90 ntBASIC3.99□□□□□ -1.77
MS4A3Q96HJ5 RNA5SP332-201ENST00000391063 115 ntBASIC3.99□□□□□ -1.77
MS4A3Q96HJ5 ATP5A1P2-201ENST00000412323 255 ntBASIC3.99□□□□□ -1.77
MS4A3Q96HJ5 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.99□□□□□ -1.77
MS4A3Q96HJ5 AC244505.7-201ENST00000599675 272 ntBASIC3.99□□□□□ -1.77
MS4A3Q96HJ5 AP000346.3-201ENST00000622821 210 ntBASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 126 ms