Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 Y_RNA.398-201ENST00000383952 99 ntBASIC2.62□□□□□ -1.99
ERCC4Q92889 RNU6-187P-201ENST00000384139 106 ntBASIC2.62□□□□□ -1.99
ERCC4Q92889 SEPT7P4-201ENST00000437076 306 ntBASIC2.62□□□□□ -1.99
ERCC4Q92889 AC018634.1-201ENST00000437554 401 ntBASIC2.62□□□□□ -1.99
ERCC4Q92889 RPS4XP11-201ENST00000446897 772 ntBASIC2.62□□□□□ -1.99
ERCC4Q92889 AC245102.2-201ENST00000448956 180 ntBASIC2.62□□□□□ -1.99
ERCC4Q92889 AC079804.2-201ENST00000490376 200 ntBASIC2.62□□□□□ -1.99
ERCC4Q92889 RN7SL636P-201ENST00000497504 294 ntBASIC2.62□□□□□ -1.99
ERCC4Q92889 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.62□□□□□ -1.99
ERCC4Q92889 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC2.62□□□□□ -1.99
ERCC4Q92889 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.62□□□□□ -1.99
ERCC4Q92889 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC2.62□□□□□ -1.99
ERCC4Q92889 AC109810.1-201ENST00000534066 224 ntBASIC2.62□□□□□ -1.99
ERCC4Q92889 CYCSP26-201ENST00000534107 320 ntBASIC2.62□□□□□ -1.99
ERCC4Q92889 U6.108-201ENST00000637764 58 ntBASIC2.62□□□□□ -1.99
ERCC4Q92889 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
ERCC4Q92889 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
ERCC4Q92889 RNU6-1164P-201ENST00000364428 107 ntBASIC2.61□□□□□ -1.99
ERCC4Q92889 RNU6-160P-201ENST00000384591 107 ntBASIC2.61□□□□□ -1.99
ERCC4Q92889 RNU6-417P-201ENST00000384712 107 ntBASIC2.61□□□□□ -1.99
ERCC4Q92889 RNU6-1228P-201ENST00000391014 107 ntBASIC2.61□□□□□ -1.99
ERCC4Q92889 MIR1253-201ENST00000408273 105 ntBASIC2.61□□□□□ -1.99
ERCC4Q92889 RN7SKP101-201ENST00000411376 320 ntBASIC2.61□□□□□ -1.99
ERCC4Q92889 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.61□□□□□ -1.99
ERCC4Q92889 RPL23AP54-201ENST00000495129 419 ntBASIC2.61□□□□□ -1.99
ERCC4Q92889 RNU7-99P-201ENST00000516271 62 ntBASIC2.61□□□□□ -1.99
ERCC4Q92889 RNU7-121P-201ENST00000516604 62 ntBASIC2.61□□□□□ -1.99
ERCC4Q92889 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC2.61□□□□□ -1.99
ERCC4Q92889 MIR4431-201ENST00000579990 94 ntBASIC2.61□□□□□ -1.99
ERCC4Q92889 AC103810.6-201ENST00000606708 136 ntBASIC2.61□□□□□ -1.99
ERCC4Q92889 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.61□□□□□ -1.99
ERCC4Q92889 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.61□□□□□ -1.99
ERCC4Q92889 MIR1291-201ENST00000627649 87 ntBASIC2.61□□□□□ -1.99
ERCC4Q92889 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC2.61□□□□□ -1.99
ERCC4Q92889 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.61□□□□□ -1.99
ERCC4Q92889 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.61□□□□□ -1.99
ERCC4Q92889 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.61□□□□□ -1.99
ERCC4Q92889 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
ERCC4Q92889 RNU4-82P-201ENST00000362443 140 ntBASIC2.6□□□□□ -1.99
ERCC4Q92889 RNY3P5-201ENST00000384127 102 ntBASIC2.6□□□□□ -1.99
ERCC4Q92889 MT-TT-201ENST00000387460 66 ntBASIC2.6□□□□□ -1.99
ERCC4Q92889 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC2.6□□□□□ -1.99
ERCC4Q92889 AC245047.8-201ENST00000456455 284 ntBASIC2.6□□□□□ -1.99
ERCC4Q92889 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.6□□□□□ -1.99
ERCC4Q92889 MIR3169-201ENST00000578032 83 ntBASIC2.6□□□□□ -1.99
ERCC4Q92889 AC091178.2-201ENST00000584401 117 ntBASIC2.6□□□□□ -1.99
ERCC4Q92889 AC131280.1-202ENST00000624067 4211 ntBASIC2.6□□□□□ -1.99
ERCC4Q92889 RNU4-13P-201ENST00000364019 141 ntBASIC2.59□□□□□ -1.99
ERCC4Q92889 SNORD114-30-201ENST00000364448 72 ntBASIC2.59□□□□□ -1.99
ERCC4Q92889 RNU1-91P-201ENST00000364746 163 ntBASIC2.59□□□□□ -1.99
ERCC4Q92889 RNU1-148P-201ENST00000384472 162 ntBASIC2.59□□□□□ -1.99
ERCC4Q92889 RNA5SP496-201ENST00000391240 109 ntBASIC2.59□□□□□ -1.99
ERCC4Q92889 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.59□□□□□ -1.99
ERCC4Q92889 RNU6-1041P-201ENST00000516254 102 ntBASIC2.59□□□□□ -1.99
ERCC4Q92889 SNORD53-201ENST00000579969 78 ntBASIC2.59□□□□□ -1.99
ERCC4Q92889 AC007229.1-201ENST00000590455 412 ntBASIC2.59□□□□□ -1.99
ERCC4Q92889 AL929325.1-201ENST00000603096 117 ntBASIC2.59□□□□□ -1.99
ERCC4Q92889 SNORD14A-201ENST00000606526 91 ntBASIC2.59□□□□□ -1.99
ERCC4Q92889 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.59□□□□□ -1.99
ERCC4Q92889 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.59□□□□□ -1.99
ERCC4Q92889 RNU6-1130P-201ENST00000365434 107 ntBASIC2.58□□□□□ -2
ERCC4Q92889 SNORD50.2-201ENST00000365465 70 ntBASIC2.58□□□□□ -2
ERCC4Q92889 RNU6-136P-201ENST00000384663 107 ntBASIC2.58□□□□□ -2
ERCC4Q92889 RNU6-376P-201ENST00000384731 106 ntBASIC2.58□□□□□ -2
ERCC4Q92889 RNU6-239P-201ENST00000390990 99 ntBASIC2.58□□□□□ -2
ERCC4Q92889 RNA5SP467-201ENST00000391274 118 ntBASIC2.58□□□□□ -2
ERCC4Q92889 AL606845.1-201ENST00000404881 255 ntBASIC2.58□□□□□ -2
ERCC4Q92889 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.58□□□□□ -2
ERCC4Q92889 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC2.58□□□□□ -2
ERCC4Q92889 ATP5J2P3-201ENST00000451550 258 ntBASIC2.58□□□□□ -2
ERCC4Q92889 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.58□□□□□ -2
ERCC4Q92889 RPS26P45-201ENST00000471748 340 ntBASIC2.58□□□□□ -2
ERCC4Q92889 RNU6-1007P-201ENST00000516586 107 ntBASIC2.58□□□□□ -2
ERCC4Q92889 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC2.58□□□□□ -2
ERCC4Q92889 MIR3910-1-201ENST00000580936 111 ntBASIC2.58□□□□□ -2
ERCC4Q92889 AC022513.1-201ENST00000624512 117 ntBASIC2.58□□□□□ -2
ERCC4Q92889 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.58□□□□□ -2
ERCC4Q92889 AC100821.1-201ENST00000523153 2479 ntBASIC2.58□□□□□ -2
ERCC4Q92889 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.57□□□□□ -2
ERCC4Q92889 Y_RNA.8-201ENST00000362353 102 ntBASIC2.57□□□□□ -2
ERCC4Q92889 RNA5SP493-201ENST00000364115 91 ntBASIC2.57□□□□□ -2
ERCC4Q92889 MIR520G-201ENST00000385064 90 ntBASIC2.57□□□□□ -2
ERCC4Q92889 RNU4-43P-201ENST00000410628 137 ntBASIC2.57□□□□□ -2
ERCC4Q92889 AC090255.1-201ENST00000495779 349 ntBASIC2.57□□□□□ -2
ERCC4Q92889 AC234781.5-201ENST00000508429 271 ntBASIC2.57□□□□□ -2
ERCC4Q92889 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.57□□□□□ -2
ERCC4Q92889 RNU6-789P-201ENST00000517105 102 ntBASIC2.57□□□□□ -2
ERCC4Q92889 MIR3126-201ENST00000577443 74 ntBASIC2.57□□□□□ -2
ERCC4Q92889 MIR4435-1-201ENST00000582552 80 ntBASIC2.57□□□□□ -2
ERCC4Q92889 AC073413.2-201ENST00000604332 360 ntBASIC2.57□□□□□ -2
ERCC4Q92889 CTSLP2-204ENST00000629029 392 ntBASIC2.57□□□□□ -2
ERCC4Q92889 MTND1P7-201ENST00000632801 297 ntBASIC2.57□□□□□ -2
ERCC4Q92889 SNORA33-201ENST00000363664 130 ntBASIC2.56□□□□□ -2
ERCC4Q92889 Y_RNA.357-201ENST00000365487 109 ntBASIC2.56□□□□□ -2
ERCC4Q92889 HMGN2P38-201ENST00000423806 265 ntBASIC2.56□□□□□ -2
ERCC4Q92889 RNU6-561P-201ENST00000516222 102 ntBASIC2.56□□□□□ -2
ERCC4Q92889 RNU6-346P-201ENST00000516288 111 ntBASIC2.56□□□□□ -2
ERCC4Q92889 AC011604.1-201ENST00000545978 196 ntBASIC2.56□□□□□ -2
ERCC4Q92889 AC026271.5-201ENST00000577873 130 ntBASIC2.56□□□□□ -2
ERCC4Q92889 AL359075.3-201ENST00000613288 217 ntBASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 226.3 ms