Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 MIR378D2-201ENST00000580636 98 ntBASIC2.95□□□□□ -1.94
DDX1Q92499 ZNF861P-201ENST00000588126 639 ntBASIC2.95□□□□□ -1.94
DDX1Q92499 AL021707.8-201ENST00000609428 183 ntBASIC2.95□□□□□ -1.94
DDX1Q92499 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
DDX1Q92499 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.95□□□□□ -1.94
DDX1Q92499 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.94□□□□□ -1.94
DDX1Q92499 AC009487.4-201ENST00000624969 3585 ntBASIC2.94□□□□□ -1.94
DDX1Q92499 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.94□□□□□ -1.94
DDX1Q92499 U8.2-201ENST00000363156 134 ntBASIC2.94□□□□□ -1.94
DDX1Q92499 RNU6-978P-201ENST00000364371 103 ntBASIC2.94□□□□□ -1.94
DDX1Q92499 Y_RNA.309-201ENST00000365046 111 ntBASIC2.94□□□□□ -1.94
DDX1Q92499 RNU6-1323P-201ENST00000384025 107 ntBASIC2.94□□□□□ -1.94
DDX1Q92499 RNU6-418P-201ENST00000384035 107 ntBASIC2.94□□□□□ -1.94
DDX1Q92499 MIR592-201ENST00000384959 97 ntBASIC2.94□□□□□ -1.94
DDX1Q92499 Y_RNA.584-201ENST00000391090 114 ntBASIC2.94□□□□□ -1.94
DDX1Q92499 SRIP3-201ENST00000413200 219 ntBASIC2.94□□□□□ -1.94
DDX1Q92499 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.94□□□□□ -1.94
DDX1Q92499 RPL23AP7-203ENST00000449021 469 ntBASIC2.94□□□□□ -1.94
DDX1Q92499 snoU13.23-201ENST00000458863 104 ntBASIC2.94□□□□□ -1.94
DDX1Q92499 snoU13.15-201ENST00000459407 104 ntBASIC2.94□□□□□ -1.94
DDX1Q92499 RPL36AP21-201ENST00000490372 323 ntBASIC2.94□□□□□ -1.94
DDX1Q92499 AC008413.1-201ENST00000511864 177 ntBASIC2.94□□□□□ -1.94
DDX1Q92499 SNORA9.3-201ENST00000516383 129 ntBASIC2.94□□□□□ -1.94
DDX1Q92499 RNU2-34P-201ENST00000516534 121 ntBASIC2.94□□□□□ -1.94
DDX1Q92499 PRELID2P1-201ENST00000552837 301 ntBASIC2.94□□□□□ -1.94
DDX1Q92499 DEFB122-202ENST00000569013 197 ntBASIC2.94□□□□□ -1.94
DDX1Q92499 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.94□□□□□ -1.94
DDX1Q92499 U6.95-201ENST00000636931 70 ntBASIC2.94□□□□□ -1.94
DDX1Q92499 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.94□□□□□ -1.94
DDX1Q92499 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
DDX1Q92499 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
DDX1Q92499 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
DDX1Q92499 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.93□□□□□ -1.94
DDX1Q92499 RNU6-1164P-201ENST00000364428 107 ntBASIC2.93□□□□□ -1.94
DDX1Q92499 Y_RNA.332-201ENST00000365271 113 ntBASIC2.93□□□□□ -1.94
DDX1Q92499 SNORD116-13-201ENST00000384408 92 ntBASIC2.93□□□□□ -1.94
DDX1Q92499 SNORD88.1-201ENST00000408684 91 ntBASIC2.93□□□□□ -1.94
DDX1Q92499 Y_RNA.630-201ENST00000411370 108 ntBASIC2.93□□□□□ -1.94
DDX1Q92499 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.93□□□□□ -1.94
DDX1Q92499 AC245047.4-201ENST00000433189 144 ntBASIC2.93□□□□□ -1.94
DDX1Q92499 AL357134.1-201ENST00000445848 426 ntBASIC2.93□□□□□ -1.94
DDX1Q92499 SNORD109B-201ENST00000458961 67 ntBASIC2.93□□□□□ -1.94
DDX1Q92499 SNORD109A-201ENST00000459128 67 ntBASIC2.93□□□□□ -1.94
DDX1Q92499 RN7SL297P-201ENST00000483161 293 ntBASIC2.93□□□□□ -1.94
DDX1Q92499 RNU5E-3P-201ENST00000515913 68 ntBASIC2.93□□□□□ -1.94
DDX1Q92499 SNORA4.4-201ENST00000515921 135 ntBASIC2.93□□□□□ -1.94
DDX1Q92499 NDUFA5P6-201ENST00000542110 379 ntBASIC2.93□□□□□ -1.94
DDX1Q92499 AL160236.1-201ENST00000556317 195 ntBASIC2.93□□□□□ -1.94
DDX1Q92499 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.93□□□□□ -1.94
DDX1Q92499 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
DDX1Q92499 RNU6-674P-201ENST00000363831 107 ntBASIC2.92□□□□□ -1.94
DDX1Q92499 RNU1-112P-201ENST00000364401 164 ntBASIC2.92□□□□□ -1.94
DDX1Q92499 RNU6-1336P-201ENST00000383886 109 ntBASIC2.92□□□□□ -1.94
DDX1Q92499 RNU6-484P-201ENST00000384016 107 ntBASIC2.92□□□□□ -1.94
DDX1Q92499 SNORD14D-201ENST00000384390 87 ntBASIC2.92□□□□□ -1.94
DDX1Q92499 RNU6-1235P-201ENST00000384559 107 ntBASIC2.92□□□□□ -1.94
DDX1Q92499 MIR873-201ENST00000401120 77 ntBASIC2.92□□□□□ -1.94
DDX1Q92499 RNA5SP344-201ENST00000411081 104 ntBASIC2.92□□□□□ -1.94
DDX1Q92499 Y_RNA.622-201ENST00000411091 108 ntBASIC2.92□□□□□ -1.94
DDX1Q92499 RNU6-57P-201ENST00000411348 103 ntBASIC2.92□□□□□ -1.94
DDX1Q92499 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.92□□□□□ -1.94
DDX1Q92499 HSPE1P21-201ENST00000438283 308 ntBASIC2.92□□□□□ -1.94
DDX1Q92499 AC016717.1-201ENST00000448918 286 ntBASIC2.92□□□□□ -1.94
DDX1Q92499 RNU6-498P-201ENST00000459468 107 ntBASIC2.92□□□□□ -1.94
DDX1Q92499 SNORA72.7-201ENST00000516349 94 ntBASIC2.92□□□□□ -1.94
DDX1Q92499 RNU6-1337P-201ENST00000516525 95 ntBASIC2.92□□□□□ -1.94
DDX1Q92499 AC108081.1-201ENST00000604358 221 ntBASIC2.92□□□□□ -1.94
DDX1Q92499 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.92□□□□□ -1.94
DDX1Q92499 AC068647.2-201ENST00000637380 353 ntBASIC2.92□□□□□ -1.94
DDX1Q92499 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.92□□□□□ -1.94
DDX1Q92499 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC2.92□□□□□ -1.94
DDX1Q92499 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.92□□□□□ -1.94
DDX1Q92499 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
DDX1Q92499 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
DDX1Q92499 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.91□□□□□ -1.94
DDX1Q92499 Y_RNA.120-201ENST00000363304 110 ntBASIC2.91□□□□□ -1.94
DDX1Q92499 RNU6-482P-201ENST00000391068 107 ntBASIC2.91□□□□□ -1.94
DDX1Q92499 RNA5SP496-201ENST00000391240 109 ntBASIC2.91□□□□□ -1.94
DDX1Q92499 RNA5SP89-201ENST00000410300 108 ntBASIC2.91□□□□□ -1.94
DDX1Q92499 Y_RNA.617-201ENST00000410920 90 ntBASIC2.91□□□□□ -1.94
DDX1Q92499 RNU2-55P-201ENST00000411146 174 ntBASIC2.91□□□□□ -1.94
DDX1Q92499 RNU6-221P-201ENST00000459541 99 ntBASIC2.91□□□□□ -1.94
DDX1Q92499 MTND5P34-201ENST00000568888 325 ntBASIC2.91□□□□□ -1.94
DDX1Q92499 Y_RNA.757-201ENST00000578934 114 ntBASIC2.91□□□□□ -1.94
DDX1Q92499 AL031274.2-201ENST00000599419 203 ntBASIC2.91□□□□□ -1.94
DDX1Q92499 MIR6733-201ENST00000635723 61 ntBASIC2.91□□□□□ -1.94
DDX1Q92499 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.91□□□□□ -1.94
DDX1Q92499 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.91□□□□□ -1.94
DDX1Q92499 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
DDX1Q92499 SNORA27.1-201ENST00000362604 124 ntBASIC2.9□□□□□ -1.95
DDX1Q92499 U8.1-201ENST00000362843 134 ntBASIC2.9□□□□□ -1.95
DDX1Q92499 MIR9-1-201ENST00000385198 89 ntBASIC2.9□□□□□ -1.95
DDX1Q92499 AL138827.1-201ENST00000402666 306 ntBASIC2.9□□□□□ -1.95
DDX1Q92499 EDDM3CP-201ENST00000415977 425 ntBASIC2.9□□□□□ -1.95
DDX1Q92499 AC008134.1-201ENST00000420943 193 ntBASIC2.9□□□□□ -1.95
DDX1Q92499 AC245102.2-201ENST00000448956 180 ntBASIC2.9□□□□□ -1.95
DDX1Q92499 SNORD33.1-201ENST00000516213 88 ntBASIC2.9□□□□□ -1.95
DDX1Q92499 RNU6-197P-201ENST00000516680 100 ntBASIC2.9□□□□□ -1.95
DDX1Q92499 RNU2-60P-201ENST00000517290 128 ntBASIC2.9□□□□□ -1.95
DDX1Q92499 AC026271.5-201ENST00000577873 130 ntBASIC2.9□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms