Protein–RNA interactions for Protein: Q8WXD2

SCG3, Secretogranin-3, humanhuman

Known RBP Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3Q8WXD2 AC009237.6-201ENST00000446969 424 ntBASIC3.33□□□□□ -1.88
SCG3Q8WXD2 RNU6-1149P-201ENST00000516810 97 ntBASIC3.33□□□□□ -1.88
SCG3Q8WXD2 IGKV1-22-201ENST00000524313 326 ntBASIC3.33□□□□□ -1.88
SCG3Q8WXD2 U4atac.1-201ENST00000618345 95 ntBASIC3.33□□□□□ -1.88
SCG3Q8WXD2 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.33□□□□□ -1.88
SCG3Q8WXD2 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
SCG3Q8WXD2 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
SCG3Q8WXD2 MAPK10-266ENST00000641066 6555 ntBASIC3.32□□□□□ -1.88
SCG3Q8WXD2 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
SCG3Q8WXD2 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC3.32□□□□□ -1.88
SCG3Q8WXD2 MIR548A1-201ENST00000385041 97 ntBASIC3.32□□□□□ -1.88
SCG3Q8WXD2 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.32□□□□□ -1.88
SCG3Q8WXD2 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC3.32□□□□□ -1.88
SCG3Q8WXD2 CST9LP2-201ENST00000437612 320 ntBASIC3.32□□□□□ -1.88
SCG3Q8WXD2 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC3.32□□□□□ -1.88
SCG3Q8WXD2 MIR5680-201ENST00000577577 84 ntBASIC3.32□□□□□ -1.88
SCG3Q8WXD2 AC022217.4-201ENST00000604389 163 ntBASIC3.32□□□□□ -1.88
SCG3Q8WXD2 uc_338.1-201ENST00000612113 180 ntBASIC3.32□□□□□ -1.88
SCG3Q8WXD2 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.32□□□□□ -1.88
SCG3Q8WXD2 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
SCG3Q8WXD2 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.32□□□□□ -1.88
SCG3Q8WXD2 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
SCG3Q8WXD2 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
SCG3Q8WXD2 MIR518F-201ENST00000384973 87 ntBASIC3.31□□□□□ -1.88
SCG3Q8WXD2 MIR802-201ENST00000390235 94 ntBASIC3.31□□□□□ -1.88
SCG3Q8WXD2 MIR1262-201ENST00000408276 93 ntBASIC3.31□□□□□ -1.88
SCG3Q8WXD2 RN7SKP284-201ENST00000411002 343 ntBASIC3.31□□□□□ -1.88
SCG3Q8WXD2 AL163195.1-201ENST00000496941 348 ntBASIC3.31□□□□□ -1.88
SCG3Q8WXD2 RNU1-143P-201ENST00000516296 146 ntBASIC3.31□□□□□ -1.88
SCG3Q8WXD2 SCARNA15-202ENST00000516881 127 ntBASIC3.31□□□□□ -1.88
SCG3Q8WXD2 AC005000.2-201ENST00000605468 310 ntBASIC3.31□□□□□ -1.88
SCG3Q8WXD2 YPEL5P2-201ENST00000605553 359 ntBASIC3.31□□□□□ -1.88
SCG3Q8WXD2 U1.23-201ENST00000610293 146 ntBASIC3.31□□□□□ -1.88
SCG3Q8WXD2 RNU1-68P-201ENST00000615382 146 ntBASIC3.31□□□□□ -1.88
SCG3Q8WXD2 U1.39-201ENST00000621562 146 ntBASIC3.31□□□□□ -1.88
SCG3Q8WXD2 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC3.31□□□□□ -1.88
SCG3Q8WXD2 AC093831.2-201ENST00000624393 3427 ntBASIC3.31□□□□□ -1.88
SCG3Q8WXD2 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
SCG3Q8WXD2 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.3□□□□□ -1.88
SCG3Q8WXD2 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
SCG3Q8WXD2 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
SCG3Q8WXD2 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
SCG3Q8WXD2 Y_RNA.43-201ENST00000362670 111 ntBASIC3.3□□□□□ -1.88
SCG3Q8WXD2 MIR1263-201ENST00000408324 86 ntBASIC3.3□□□□□ -1.88
SCG3Q8WXD2 RNA5SP229-201ENST00000410809 99 ntBASIC3.3□□□□□ -1.88
SCG3Q8WXD2 RNU4-47P-201ENST00000410876 114 ntBASIC3.3□□□□□ -1.88
SCG3Q8WXD2 AC007064.1-201ENST00000412238 351 ntBASIC3.3□□□□□ -1.88
SCG3Q8WXD2 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.3□□□□□ -1.88
SCG3Q8WXD2 RNA5SP170-201ENST00000517150 101 ntBASIC3.3□□□□□ -1.88
SCG3Q8WXD2 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.3□□□□□ -1.88
SCG3Q8WXD2 MIR4762-201ENST00000585261 75 ntBASIC3.3□□□□□ -1.88
SCG3Q8WXD2 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC3.3□□□□□ -1.88
SCG3Q8WXD2 MIR7112-201ENST00000616126 65 ntBASIC3.3□□□□□ -1.88
SCG3Q8WXD2 AL449363.1-201ENST00000617815 186 ntBASIC3.3□□□□□ -1.88
SCG3Q8WXD2 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
SCG3Q8WXD2 NDUFB4P4-201ENST00000404822 243 ntBASIC3.29□□□□□ -1.88
SCG3Q8WXD2 RNA5SP136-201ENST00000410906 107 ntBASIC3.29□□□□□ -1.88
SCG3Q8WXD2 RPL32P35-201ENST00000415214 394 ntBASIC3.29□□□□□ -1.88
SCG3Q8WXD2 RNA5SP385-201ENST00000515947 110 ntBASIC3.29□□□□□ -1.88
SCG3Q8WXD2 MIR5197-201ENST00000583721 112 ntBASIC3.29□□□□□ -1.88
SCG3Q8WXD2 AC006441.5-201ENST00000612680 209 ntBASIC3.29□□□□□ -1.88
SCG3Q8WXD2 MIR8057-201ENST00000620957 69 ntBASIC3.29□□□□□ -1.88
SCG3Q8WXD2 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
SCG3Q8WXD2 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.28□□□□□ -1.88
SCG3Q8WXD2 RNU6-862P-201ENST00000362804 105 ntBASIC3.28□□□□□ -1.88
SCG3Q8WXD2 SNORD68-201ENST00000363214 84 ntBASIC3.28□□□□□ -1.88
SCG3Q8WXD2 U8.5-201ENST00000364528 136 ntBASIC3.28□□□□□ -1.88
SCG3Q8WXD2 Y_RNA.309-201ENST00000365046 111 ntBASIC3.28□□□□□ -1.88
SCG3Q8WXD2 Y_RNA.410-201ENST00000383992 113 ntBASIC3.28□□□□□ -1.88
SCG3Q8WXD2 Y_RNA.528-201ENST00000384575 108 ntBASIC3.28□□□□□ -1.88
SCG3Q8WXD2 RN7SL75P-201ENST00000461926 281 ntBASIC3.28□□□□□ -1.88
SCG3Q8WXD2 RNA5SP217-201ENST00000515959 91 ntBASIC3.28□□□□□ -1.88
SCG3Q8WXD2 SCARNA20.6-201ENST00000517251 106 ntBASIC3.28□□□□□ -1.88
SCG3Q8WXD2 MIR4506-201ENST00000584693 77 ntBASIC3.28□□□□□ -1.88
SCG3Q8WXD2 AC134878.1-201ENST00000619901 243 ntBASIC3.28□□□□□ -1.88
SCG3Q8WXD2 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.28□□□□□ -1.88
SCG3Q8WXD2 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
SCG3Q8WXD2 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.88
SCG3Q8WXD2 AC008555.8-201ENST00000623602 2168 ntBASIC3.28□□□□□ -1.88
SCG3Q8WXD2 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.28□□□□□ -1.89
SCG3Q8WXD2 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
SCG3Q8WXD2 SNORD14E-201ENST00000364009 85 ntBASIC3.27□□□□□ -1.89
SCG3Q8WXD2 RNA5SP493-201ENST00000364115 91 ntBASIC3.27□□□□□ -1.89
SCG3Q8WXD2 RNU6-442P-201ENST00000383968 104 ntBASIC3.27□□□□□ -1.89
SCG3Q8WXD2 MIR634-201ENST00000385208 97 ntBASIC3.27□□□□□ -1.89
SCG3Q8WXD2 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC3.27□□□□□ -1.89
SCG3Q8WXD2 AL445687.1-201ENST00000439946 251 ntBASIC3.27□□□□□ -1.89
SCG3Q8WXD2 AC115115.1-201ENST00000449927 248 ntBASIC3.27□□□□□ -1.89
SCG3Q8WXD2 SNORA31.26-201ENST00000517250 137 ntBASIC3.27□□□□□ -1.89
SCG3Q8WXD2 CTSLP2-204ENST00000629029 392 ntBASIC3.27□□□□□ -1.89
SCG3Q8WXD2 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
SCG3Q8WXD2 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.27□□□□□ -1.89
SCG3Q8WXD2 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
SCG3Q8WXD2 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.27□□□□□ -1.89
SCG3Q8WXD2 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
SCG3Q8WXD2 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC3.26□□□□□ -1.89
SCG3Q8WXD2 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
SCG3Q8WXD2 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.26□□□□□ -1.89
SCG3Q8WXD2 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC3.26□□□□□ -1.89
SCG3Q8WXD2 MIR548O-201ENST00000408583 114 ntBASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 109.6 ms