| ASAP3 | Q8TDY4 | AC004832.5-201 | ENST00000608677 | 401 nt | BASIC | 3.18 | □□□□□ -1.9 | | |
| ASAP3 | Q8TDY4 | LTN1-201 | ENST00000361371 | 7685 nt | APPRIS P1 TSL 1 (best) BASIC | 3.18 | □□□□□ -1.9 | | |
| ASAP3 | Q8TDY4 | EYS-202 | ENST00000342421 | 2168 nt | TSL 1 (best) BASIC | 3.17 | □□□□□ -1.9 | | |
| ASAP3 | Q8TDY4 | DMD-203 | ENST00000357033 | 13956 nt | APPRIS P3 TSL 1 (best) BASIC | 3.17 | □□□□□ -1.9 | | |
| ASAP3 | Q8TDY4 | CHD9-218 | ENST00000566029 | 13110 nt | APPRIS P1 TSL 1 (best) BASIC | 3.17 | □□□□□ -1.9 | | |
| ASAP3 | Q8TDY4 | MIR561-201 | ENST00000385216 | 97 nt | BASIC | 3.17 | □□□□□ -1.9 | | |
| ASAP3 | Q8TDY4 | TRAJ31-201 | ENST00000390506 | 57 nt | APPRIS P1 BASIC | 3.17 | □□□□□ -1.9 | | |
| ASAP3 | Q8TDY4 | RNU11-5P-201 | ENST00000391216 | 129 nt | BASIC | 3.17 | □□□□□ -1.9 | | |
| ASAP3 | Q8TDY4 | RNA5SP467-201 | ENST00000391274 | 118 nt | BASIC | 3.17 | □□□□□ -1.9 | | |
| ASAP3 | Q8TDY4 | AL031121.1-201 | ENST00000406553 | 254 nt | BASIC | 3.17 | □□□□□ -1.9 | | |
| ASAP3 | Q8TDY4 | Y_RNA.621-201 | ENST00000411065 | 96 nt | BASIC | 3.17 | □□□□□ -1.9 | | |
| ASAP3 | Q8TDY4 | AC003685.2-201 | ENST00000422795 | 395 nt | BASIC | 3.17 | □□□□□ -1.9 | | |
| ASAP3 | Q8TDY4 | SNRPGP10-201 | ENST00000432323 | 225 nt | BASIC | 3.17 | □□□□□ -1.9 | | |
| ASAP3 | Q8TDY4 | RN7SKP132-201 | ENST00000516001 | 208 nt | BASIC | 3.17 | □□□□□ -1.9 | | |
| ASAP3 | Q8TDY4 | RNA5SP236-201 | ENST00000516169 | 116 nt | BASIC | 3.17 | □□□□□ -1.9 | | |
| ASAP3 | Q8TDY4 | RNU6-341P-201 | ENST00000516973 | 96 nt | BASIC | 3.17 | □□□□□ -1.9 | | |
| ASAP3 | Q8TDY4 | AC007536.1-201 | ENST00000533382 | 349 nt | BASIC | 3.17 | □□□□□ -1.9 | | |
| ASAP3 | Q8TDY4 | AC079600.2-201 | ENST00000550076 | 130 nt | BASIC | 3.17 | □□□□□ -1.9 | | |
| ASAP3 | Q8TDY4 | MIR3129-201 | ENST00000581095 | 76 nt | BASIC | 3.17 | □□□□□ -1.9 | | |
| ASAP3 | Q8TDY4 | AC008507.4-201 | ENST00000585464 | 127 nt | BASIC | 3.17 | □□□□□ -1.9 | | |
| ASAP3 | Q8TDY4 | AL355297.2-201 | ENST00000604792 | 129 nt | BASIC | 3.17 | □□□□□ -1.9 | | |
| ASAP3 | Q8TDY4 | LMBR1-222 | ENST00000638959 | 93 nt | TSL 5 BASIC | 3.17 | □□□□□ -1.9 | | |
| ASAP3 | Q8TDY4 | ZNF676-201 | ENST00000397121 | 2944 nt | APPRIS P1 TSL 2 BASIC | 3.16 | □□□□□ -1.9 | | |
| ASAP3 | Q8TDY4 | RNU6-888P-201 | ENST00000363010 | 101 nt | BASIC | 3.16 | □□□□□ -1.9 | | |
| ASAP3 | Q8TDY4 | RNU6-1292P-201 | ENST00000383856 | 107 nt | BASIC | 3.16 | □□□□□ -1.9 | | |
| ASAP3 | Q8TDY4 | SNORD24-201 | ENST00000383884 | 75 nt | BASIC | 3.16 | □□□□□ -1.9 | | |
| ASAP3 | Q8TDY4 | SNORD116-21-201 | ENST00000384507 | 92 nt | BASIC | 3.16 | □□□□□ -1.9 | | |
| ASAP3 | Q8TDY4 | RNU6-851P-201 | ENST00000384565 | 107 nt | BASIC | 3.16 | □□□□□ -1.9 | | |
| ASAP3 | Q8TDY4 | TRDJ3-201 | ENST00000390476 | 59 nt | APPRIS P1 BASIC | 3.16 | □□□□□ -1.9 | | |
| ASAP3 | Q8TDY4 | SNORD72-201 | ENST00000390994 | 80 nt | BASIC | 3.16 | □□□□□ -1.9 | | |
| ASAP3 | Q8TDY4 | AF228730.3-201 | ENST00000436691 | 102 nt | BASIC | 3.16 | □□□□□ -1.9 | | |
| ASAP3 | Q8TDY4 | RNU6-1291P-201 | ENST00000516591 | 104 nt | BASIC | 3.16 | □□□□□ -1.9 | | |
| ASAP3 | Q8TDY4 | SCARNA13-201 | ENST00000516672 | 275 nt | BASIC | 3.16 | □□□□□ -1.9 | | |
| ASAP3 | Q8TDY4 | RNU6-667P-201 | ENST00000517186 | 102 nt | BASIC | 3.16 | □□□□□ -1.9 | | |
| ASAP3 | Q8TDY4 | AL358944.1-201 | ENST00000528537 | 144 nt | BASIC | 3.16 | □□□□□ -1.9 | | |
| ASAP3 | Q8TDY4 | GNG2-205 | ENST00000554736 | 569 nt | APPRIS P1 TSL 4 BASIC | 3.16 | □□□□□ -1.9 | | |
| ASAP3 | Q8TDY4 | MIR7106-201 | ENST00000612419 | 65 nt | BASIC | 3.16 | □□□□□ -1.9 | | |
| ASAP3 | Q8TDY4 | AL359075.3-201 | ENST00000613288 | 217 nt | BASIC | 3.16 | □□□□□ -1.9 | | |
| ASAP3 | Q8TDY4 | MIR6079-201 | ENST00000635807 | 62 nt | BASIC | 3.16 | □□□□□ -1.9 | | |
| ASAP3 | Q8TDY4 | PRKG2-206 | ENST00000545647 | 3852 nt | TSL 5 BASIC | 3.16 | □□□□□ -1.9 | | |
| ASAP3 | Q8TDY4 | SKIL-203 | ENST00000426052 | 2757 nt | TSL 2 BASIC | 3.15 | □□□□□ -1.9 | | |
| ASAP3 | Q8TDY4 | RNU6-147P-201 | ENST00000383983 | 107 nt | BASIC | 3.15 | □□□□□ -1.91 | | |
| ASAP3 | Q8TDY4 | SNORD61-201 | ENST00000384252 | 73 nt | BASIC | 3.15 | □□□□□ -1.91 | | |
| ASAP3 | Q8TDY4 | MIR548A3-201 | ENST00000385297 | 97 nt | BASIC | 3.15 | □□□□□ -1.91 | | |
| ASAP3 | Q8TDY4 | SNORA12.1-201 | ENST00000390873 | 148 nt | BASIC | 3.15 | □□□□□ -1.91 | | |
| ASAP3 | Q8TDY4 | MTATP6P21-201 | ENST00000440681 | 189 nt | BASIC | 3.15 | □□□□□ -1.91 | | |
| ASAP3 | Q8TDY4 | AC233266.1-201 | ENST00000454518 | 96 nt | BASIC | 3.15 | □□□□□ -1.91 | | |
| ASAP3 | Q8TDY4 | RN7SKP43-201 | ENST00000516173 | 320 nt | BASIC | 3.15 | □□□□□ -1.91 | | |
| ASAP3 | Q8TDY4 | RNU6-1041P-201 | ENST00000516254 | 102 nt | BASIC | 3.15 | □□□□□ -1.91 | | |
| ASAP3 | Q8TDY4 | AC107016.2-201 | ENST00000547968 | 190 nt | BASIC | 3.15 | □□□□□ -1.91 | | |
| ASAP3 | Q8TDY4 | AC242852.1-201 | ENST00000612151 | 96 nt | BASIC | 3.15 | □□□□□ -1.91 | | |
| ASAP3 | Q8TDY4 | CLRN1-AS1.1-201 | ENST00000615643 | 79 nt | BASIC | 3.15 | □□□□□ -1.91 | | |
| ASAP3 | Q8TDY4 | AC244015.1-201 | ENST00000622301 | 99 nt | BASIC | 3.15 | □□□□□ -1.91 | | |
| ASAP3 | Q8TDY4 | MUM1L1-203 | ENST00000372552 | 3957 nt | APPRIS P1 TSL 5 BASIC | 3.15 | □□□□□ -1.91 | | |
| ASAP3 | Q8TDY4 | AKAP7-209 | ENST00000541650 | 2008 nt | TSL 5 BASIC | 3.15 | □□□□□ -1.91 | | |
| ASAP3 | Q8TDY4 | CCDC30-201 | ENST00000340612 | 2664 nt | APPRIS P2 TSL 5 BASIC | 3.15 | □□□□□ -1.91 | | |
| ASAP3 | Q8TDY4 | GCNT4-201 | ENST00000322348 | 5554 nt | APPRIS P1 BASIC | 3.14 | □□□□□ -1.91 | | |
| ASAP3 | Q8TDY4 | Y_RNA.35-201 | ENST00000362601 | 101 nt | BASIC | 3.14 | □□□□□ -1.91 | | |
| ASAP3 | Q8TDY4 | MIR181B1-201 | ENST00000385240 | 110 nt | BASIC | 3.14 | □□□□□ -1.91 | | |
| ASAP3 | Q8TDY4 | SRIP3-201 | ENST00000413200 | 219 nt | BASIC | 3.14 | □□□□□ -1.91 | | |
| ASAP3 | Q8TDY4 | RN7SL499P-201 | ENST00000481141 | 276 nt | BASIC | 3.14 | □□□□□ -1.91 | | |
| ASAP3 | Q8TDY4 | RNA5SP367-201 | ENST00000516557 | 118 nt | BASIC | 3.14 | □□□□□ -1.91 | | |
| ASAP3 | Q8TDY4 | IGKV1-22-201 | ENST00000524313 | 326 nt | BASIC | 3.14 | □□□□□ -1.91 | | |
| ASAP3 | Q8TDY4 | GTF3AP2-201 | ENST00000557014 | 266 nt | BASIC | 3.14 | □□□□□ -1.91 | | |
| ASAP3 | Q8TDY4 | NEB-220 | ENST00000618972 | 26307 nt | APPRIS ALT2 TSL 5 BASIC | 3.13 | □□□□□ -1.91 | | |
| ASAP3 | Q8TDY4 | KIAA1107-202 | ENST00000636278 | 4065 nt | APPRIS P1 TSL 5 BASIC | 3.13 | □□□□□ -1.91 | | |
| ASAP3 | Q8TDY4 | ZNF271P-202 | ENST00000465539 | 1970 nt | BASIC | 3.13 | □□□□□ -1.91 | | |
| ASAP3 | Q8TDY4 | TMPRSS11A-201 | ENST00000334830 | 3054 nt | APPRIS P3 TSL 2 BASIC | 3.13 | □□□□□ -1.91 | | |
| ASAP3 | Q8TDY4 | KTN1-204 | ENST00000395311 | 4516 nt | APPRIS ALT2 TSL 1 (best) BASIC | 3.13 | □□□□□ -1.91 | | |
| ASAP3 | Q8TDY4 | Y_RNA.346-201 | ENST00000365385 | 112 nt | BASIC | 3.13 | □□□□□ -1.91 | | |
| ASAP3 | Q8TDY4 | SNORD21-201 | ENST00000383953 | 95 nt | BASIC | 3.13 | □□□□□ -1.91 | | |
| ASAP3 | Q8TDY4 | MIR548A2-201 | ENST00000384956 | 97 nt | BASIC | 3.13 | □□□□□ -1.91 | | |
| ASAP3 | Q8TDY4 | AL117342.1-201 | ENST00000404861 | 406 nt | BASIC | 3.13 | □□□□□ -1.91 | | |
| ASAP3 | Q8TDY4 | AL731684.2-201 | ENST00000426839 | 333 nt | TSL 5 BASIC | 3.13 | □□□□□ -1.91 | | |
| ASAP3 | Q8TDY4 | AL021397.1-201 | ENST00000451806 | 248 nt | BASIC | 3.13 | □□□□□ -1.91 | | |
| ASAP3 | Q8TDY4 | RNU1-131P-201 | ENST00000458943 | 161 nt | BASIC | 3.13 | □□□□□ -1.91 | | |
| ASAP3 | Q8TDY4 | AP004217.1-201 | ENST00000480579 | 346 nt | BASIC | 3.13 | □□□□□ -1.91 | | |
| ASAP3 | Q8TDY4 | MIR4679-2-201 | ENST00000578358 | 77 nt | BASIC | 3.13 | □□□□□ -1.91 | | |
| ASAP3 | Q8TDY4 | AC025166.1-201 | ENST00000612411 | 163 nt | BASIC | 3.13 | □□□□□ -1.91 | | |
| ASAP3 | Q8TDY4 | UGP2-230 | ENST00000626380 | 276 nt | TSL 5 BASIC | 3.13 | □□□□□ -1.91 | | |
| ASAP3 | Q8TDY4 | MIR6733-201 | ENST00000635723 | 61 nt | BASIC | 3.13 | □□□□□ -1.91 | | |
| ASAP3 | Q8TDY4 | CEP57L1-213 | ENST00000520883 | 2055 nt | TSL 5 BASIC | 3.13 | □□□□□ -1.91 | | |
| ASAP3 | Q8TDY4 | Y_RNA.99-201 | ENST00000363138 | 105 nt | BASIC | 3.12 | □□□□□ -1.91 | | |
| ASAP3 | Q8TDY4 | SNORA33-201 | ENST00000363664 | 130 nt | BASIC | 3.12 | □□□□□ -1.91 | | |
| ASAP3 | Q8TDY4 | SNORD114-6-201 | ENST00000364393 | 72 nt | BASIC | 3.12 | □□□□□ -1.91 | | |
| ASAP3 | Q8TDY4 | MIR634-201 | ENST00000385208 | 97 nt | BASIC | 3.12 | □□□□□ -1.91 | | |
| ASAP3 | Q8TDY4 | MIR887-201 | ENST00000401258 | 79 nt | BASIC | 3.12 | □□□□□ -1.91 | | |
| ASAP3 | Q8TDY4 | EDDM3CP-201 | ENST00000415977 | 425 nt | BASIC | 3.12 | □□□□□ -1.91 | | |
| ASAP3 | Q8TDY4 | AC105272.1-201 | ENST00000438604 | 198 nt | BASIC | 3.12 | □□□□□ -1.91 | | |
| ASAP3 | Q8TDY4 | AC234781.5-202 | ENST00000453508 | 426 nt | TSL 3 BASIC | 3.12 | □□□□□ -1.91 | | |
| ASAP3 | Q8TDY4 | AC096725.1-201 | ENST00000514266 | 313 nt | BASIC | 3.12 | □□□□□ -1.91 | | |
| ASAP3 | Q8TDY4 | AC087685.1-201 | ENST00000587507 | 141 nt | BASIC | 3.12 | □□□□□ -1.91 | | |
| ASAP3 | Q8TDY4 | AL121890.5-201 | ENST00000620848 | 304 nt | BASIC | 3.12 | □□□□□ -1.91 | | |
| ASAP3 | Q8TDY4 | ZNF334-205 | ENST00000615481 | 3706 nt | APPRIS ALT2 TSL 5 BASIC | 3.12 | □□□□□ -1.91 | | |
| ASAP3 | Q8TDY4 | PIK3C2G-206 | ENST00000538779 | 4963 nt | TSL 5 BASIC | 3.11 | □□□□□ -1.91 | | |
| ASAP3 | Q8TDY4 | FAM35CP-201 | ENST00000554755 | 2470 nt | BASIC | 3.11 | □□□□□ -1.91 | | |
| ASAP3 | Q8TDY4 | Y_RNA.43-201 | ENST00000362670 | 111 nt | BASIC | 3.11 | □□□□□ -1.91 | | |
| ASAP3 | Q8TDY4 | SNORA25B-201 | ENST00000365507 | 128 nt | BASIC | 3.11 | □□□□□ -1.91 | | |
| ASAP3 | Q8TDY4 | MIR1289-1-201 | ENST00000408836 | 144 nt | BASIC | 3.11 | □□□□□ -1.91 | | |
| ASAP3 | Q8TDY4 | Y_RNA.666-201 | ENST00000516187 | 112 nt | BASIC | 3.11 | □□□□□ -1.91 | | |