Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 RN7SL442P-201ENST00000473804 320 ntBASIC3.37□□□□□ -1.87
SIX5Q8N196 RNU6-781P-201ENST00000516377 101 ntBASIC3.37□□□□□ -1.87
SIX5Q8N196 AC026271.5-201ENST00000577873 130 ntBASIC3.37□□□□□ -1.87
SIX5Q8N196 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.37□□□□□ -1.87
SIX5Q8N196 PWAR6-201ENST00000552334 4618 ntBASIC3.37□□□□□ -1.87
SIX5Q8N196 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
SIX5Q8N196 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.36□□□□□ -1.87
SIX5Q8N196 RNU6-1084P-201ENST00000362498 107 ntBASIC3.36□□□□□ -1.87
SIX5Q8N196 RNU6-862P-201ENST00000362804 105 ntBASIC3.36□□□□□ -1.87
SIX5Q8N196 RNU6-23P-201ENST00000363283 107 ntBASIC3.36□□□□□ -1.87
SIX5Q8N196 SNORD14E-201ENST00000364009 85 ntBASIC3.36□□□□□ -1.87
SIX5Q8N196 RNA5SP42-201ENST00000364278 115 ntBASIC3.36□□□□□ -1.87
SIX5Q8N196 MIR522-201ENST00000385071 87 ntBASIC3.36□□□□□ -1.87
SIX5Q8N196 AL117342.1-201ENST00000404861 406 ntBASIC3.36□□□□□ -1.87
SIX5Q8N196 SNORA11.4-201ENST00000408823 129 ntBASIC3.36□□□□□ -1.87
SIX5Q8N196 Z96811.1-201ENST00000445880 108 ntBASIC3.36□□□□□ -1.87
SIX5Q8N196 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC3.36□□□□□ -1.87
SIX5Q8N196 TRBV12-1-201ENST00000479785 344 ntBASIC3.36□□□□□ -1.87
SIX5Q8N196 AL163195.1-201ENST00000496941 348 ntBASIC3.36□□□□□ -1.87
SIX5Q8N196 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.36□□□□□ -1.87
SIX5Q8N196 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC3.36□□□□□ -1.87
SIX5Q8N196 AC004832.5-201ENST00000608677 401 ntBASIC3.36□□□□□ -1.87
SIX5Q8N196 RNU6-442P-201ENST00000383968 104 ntBASIC3.35□□□□□ -1.87
SIX5Q8N196 MIR627-201ENST00000384979 97 ntBASIC3.35□□□□□ -1.87
SIX5Q8N196 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
SIX5Q8N196 AL109933.2-201ENST00000452651 260 ntBASIC3.35□□□□□ -1.87
SIX5Q8N196 Y_RNA.651-201ENST00000459380 103 ntBASIC3.35□□□□□ -1.87
SIX5Q8N196 AC008885.1-201ENST00000514930 301 ntBASIC3.35□□□□□ -1.87
SIX5Q8N196 RNU6-1149P-201ENST00000516810 97 ntBASIC3.35□□□□□ -1.87
SIX5Q8N196 AC091544.4-201ENST00000555268 342 ntBASIC3.35□□□□□ -1.87
SIX5Q8N196 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC3.35□□□□□ -1.87
SIX5Q8N196 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
SIX5Q8N196 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.35□□□□□ -1.87
SIX5Q8N196 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.35□□□□□ -1.87
SIX5Q8N196 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.35□□□□□ -1.87
SIX5Q8N196 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.87
SIX5Q8N196 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
SIX5Q8N196 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.34□□□□□ -1.87
SIX5Q8N196 RNA5SP432-201ENST00000362480 116 ntBASIC3.34□□□□□ -1.87
SIX5Q8N196 RNA5SP493-201ENST00000364115 91 ntBASIC3.34□□□□□ -1.87
SIX5Q8N196 RNU6-755P-201ENST00000364400 103 ntBASIC3.34□□□□□ -1.87
SIX5Q8N196 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
SIX5Q8N196 AC007064.1-201ENST00000412238 351 ntBASIC3.34□□□□□ -1.87
SIX5Q8N196 Y_RNA.649-201ENST00000459077 103 ntBASIC3.34□□□□□ -1.87
SIX5Q8N196 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC3.34□□□□□ -1.87
SIX5Q8N196 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC3.34□□□□□ -1.87
SIX5Q8N196 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC3.34□□□□□ -1.87
SIX5Q8N196 UGP2-230ENST00000626380 276 ntTSL 5 BASIC3.34□□□□□ -1.87
SIX5Q8N196 CTSLP2-204ENST00000629029 392 ntBASIC3.34□□□□□ -1.87
SIX5Q8N196 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.87
SIX5Q8N196 SNORD115-3-201ENST00000363100 82 ntBASIC3.33□□□□□ -1.88
SIX5Q8N196 snoU2-30.1-201ENST00000365012 70 ntBASIC3.33□□□□□ -1.88
SIX5Q8N196 RNU6-880P-201ENST00000384526 107 ntBASIC3.33□□□□□ -1.88
SIX5Q8N196 RNA5SP356-201ENST00000515972 94 ntBASIC3.33□□□□□ -1.88
SIX5Q8N196 RNU6-113P-201ENST00000516653 101 ntBASIC3.33□□□□□ -1.88
SIX5Q8N196 MIR3945-201ENST00000581853 98 ntBASIC3.33□□□□□ -1.88
SIX5Q8N196 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
SIX5Q8N196 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
SIX5Q8N196 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
SIX5Q8N196 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
SIX5Q8N196 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
SIX5Q8N196 MIR548A1-201ENST00000385041 97 ntBASIC3.32□□□□□ -1.88
SIX5Q8N196 SNORD77.3-201ENST00000391113 65 ntBASIC3.32□□□□□ -1.88
SIX5Q8N196 MIR1263-201ENST00000408324 86 ntBASIC3.32□□□□□ -1.88
SIX5Q8N196 MIR548O-201ENST00000408583 114 ntBASIC3.32□□□□□ -1.88
SIX5Q8N196 AC245047.3-201ENST00000429428 127 ntBASIC3.32□□□□□ -1.88
SIX5Q8N196 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.32□□□□□ -1.88
SIX5Q8N196 RNA5SP385-201ENST00000515947 110 ntBASIC3.32□□□□□ -1.88
SIX5Q8N196 RNA5SP236-201ENST00000516169 116 ntBASIC3.32□□□□□ -1.88
SIX5Q8N196 AC026333.2-201ENST00000542164 106 ntBASIC3.32□□□□□ -1.88
SIX5Q8N196 MIR4738-201ENST00000579134 87 ntBASIC3.32□□□□□ -1.88
SIX5Q8N196 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC3.32□□□□□ -1.88
SIX5Q8N196 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
SIX5Q8N196 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.31□□□□□ -1.88
SIX5Q8N196 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
SIX5Q8N196 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
SIX5Q8N196 Y_RNA.35-201ENST00000362601 101 ntBASIC3.31□□□□□ -1.88
SIX5Q8N196 Y_RNA.265-201ENST00000364677 108 ntBASIC3.31□□□□□ -1.88
SIX5Q8N196 MIR518F-201ENST00000384973 87 ntBASIC3.31□□□□□ -1.88
SIX5Q8N196 AC063976.4-201ENST00000421971 163 ntBASIC3.31□□□□□ -1.88
SIX5Q8N196 AC006989.1-201ENST00000427212 131 ntBASIC3.31□□□□□ -1.88
SIX5Q8N196 UBBP3-201ENST00000445497 241 ntBASIC3.31□□□□□ -1.88
SIX5Q8N196 RN7SL297P-201ENST00000483161 293 ntBASIC3.31□□□□□ -1.88
SIX5Q8N196 RNU6-56P-201ENST00000516986 93 ntBASIC3.31□□□□□ -1.88
SIX5Q8N196 RNA5SP380-201ENST00000517190 98 ntBASIC3.31□□□□□ -1.88
SIX5Q8N196 GTF3AP2-201ENST00000557014 266 ntBASIC3.31□□□□□ -1.88
SIX5Q8N196 UBL5P2-201ENST00000583788 219 ntBASIC3.31□□□□□ -1.88
SIX5Q8N196 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC3.31□□□□□ -1.88
SIX5Q8N196 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.31□□□□□ -1.88
SIX5Q8N196 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
SIX5Q8N196 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC3.31□□□□□ -1.88
SIX5Q8N196 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.31□□□□□ -1.88
SIX5Q8N196 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
SIX5Q8N196 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.31□□□□□ -1.88
SIX5Q8N196 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC3.31□□□□□ -1.88
SIX5Q8N196 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
SIX5Q8N196 MTND5P18-201ENST00000445624 1801 ntBASIC3.3□□□□□ -1.88
SIX5Q8N196 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
SIX5Q8N196 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC3.3□□□□□ -1.88
SIX5Q8N196 MIR548A2-201ENST00000384956 97 ntBASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 129.5 ms