Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 MIR515-1-201ENST00000384884 83 ntBASIC3.44□□□□□ -1.86
CCDC116Q8IYX3 AL451046.2-201ENST00000403074 277 ntBASIC3.44□□□□□ -1.86
CCDC116Q8IYX3 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.44□□□□□ -1.86
CCDC116Q8IYX3 AL035398.1-201ENST00000430869 322 ntBASIC3.44□□□□□ -1.86
CCDC116Q8IYX3 ATP5J2P3-201ENST00000451550 258 ntBASIC3.44□□□□□ -1.86
CCDC116Q8IYX3 CYCSP35-201ENST00000451978 304 ntBASIC3.44□□□□□ -1.86
CCDC116Q8IYX3 TRBV12-1-201ENST00000479785 344 ntBASIC3.44□□□□□ -1.86
CCDC116Q8IYX3 AL163195.1-201ENST00000496941 348 ntBASIC3.44□□□□□ -1.86
CCDC116Q8IYX3 AC091826.1-201ENST00000514065 313 ntBASIC3.44□□□□□ -1.86
CCDC116Q8IYX3 SCARNA13-201ENST00000516672 275 ntBASIC3.44□□□□□ -1.86
CCDC116Q8IYX3 IGHVII-40-1-201ENST00000517316 58 ntBASIC3.44□□□□□ -1.86
CCDC116Q8IYX3 AC023632.4-201ENST00000517783 191 ntBASIC3.44□□□□□ -1.86
CCDC116Q8IYX3 AC024995.1-201ENST00000523014 93 ntBASIC3.44□□□□□ -1.86
CCDC116Q8IYX3 MIR548Z-201ENST00000584743 97 ntBASIC3.44□□□□□ -1.86
CCDC116Q8IYX3 AC095038.3-201ENST00000634439 195 ntBASIC3.44□□□□□ -1.86
CCDC116Q8IYX3 AC244205.2-202ENST00000635781 342 ntBASIC3.44□□□□□ -1.86
CCDC116Q8IYX3 AP000553.6-201ENST00000641242 118 ntBASIC3.44□□□□□ -1.86
CCDC116Q8IYX3 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.44□□□□□ -1.86
CCDC116Q8IYX3 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
CCDC116Q8IYX3 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC3.44□□□□□ -1.86
CCDC116Q8IYX3 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.44□□□□□ -1.86
CCDC116Q8IYX3 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
CCDC116Q8IYX3 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.43□□□□□ -1.86
CCDC116Q8IYX3 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.43□□□□□ -1.86
CCDC116Q8IYX3 Y_RNA.221-201ENST00000364248 96 ntBASIC3.43□□□□□ -1.86
CCDC116Q8IYX3 Y_RNA.244-201ENST00000364484 109 ntBASIC3.43□□□□□ -1.86
CCDC116Q8IYX3 MIR592-201ENST00000384959 97 ntBASIC3.43□□□□□ -1.86
CCDC116Q8IYX3 AL022718.1-201ENST00000412004 84 ntBASIC3.43□□□□□ -1.86
CCDC116Q8IYX3 AL512326.2-201ENST00000426359 151 ntBASIC3.43□□□□□ -1.86
CCDC116Q8IYX3 AC092185.1-201ENST00000491371 97 ntBASIC3.43□□□□□ -1.86
CCDC116Q8IYX3 AC004812.1-201ENST00000540773 146 ntBASIC3.43□□□□□ -1.86
CCDC116Q8IYX3 MIR4444-1-201ENST00000581696 74 ntBASIC3.43□□□□□ -1.86
CCDC116Q8IYX3 MIR4444-2-201ENST00000584390 74 ntBASIC3.43□□□□□ -1.86
CCDC116Q8IYX3 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC3.43□□□□□ -1.86
CCDC116Q8IYX3 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.43□□□□□ -1.86
CCDC116Q8IYX3 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC3.43□□□□□ -1.86
CCDC116Q8IYX3 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
CCDC116Q8IYX3 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
CCDC116Q8IYX3 AC092435.3-201ENST00000565538 3654 ntBASIC3.42□□□□□ -1.86
CCDC116Q8IYX3 RNU6-675P-201ENST00000384236 104 ntBASIC3.42□□□□□ -1.86
CCDC116Q8IYX3 U8.11-201ENST00000384699 133 ntBASIC3.42□□□□□ -1.86
CCDC116Q8IYX3 MIR605-201ENST00000385078 83 ntBASIC3.42□□□□□ -1.86
CCDC116Q8IYX3 MRPL35P3-201ENST00000421557 364 ntBASIC3.42□□□□□ -1.86
CCDC116Q8IYX3 U8.18-201ENST00000459285 133 ntBASIC3.42□□□□□ -1.86
CCDC116Q8IYX3 RNU6-667P-201ENST00000517186 102 ntBASIC3.42□□□□□ -1.86
CCDC116Q8IYX3 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.42□□□□□ -1.86
CCDC116Q8IYX3 AC008739.3-201ENST00000603262 127 ntBASIC3.42□□□□□ -1.86
CCDC116Q8IYX3 AC064859.1-201ENST00000624741 174 ntBASIC3.42□□□□□ -1.86
CCDC116Q8IYX3 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC3.42□□□□□ -1.86
CCDC116Q8IYX3 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.42□□□□□ -1.86
CCDC116Q8IYX3 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
CCDC116Q8IYX3 CEP170P1-201ENST00000502249 4587 ntBASIC3.42□□□□□ -1.86
CCDC116Q8IYX3 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
CCDC116Q8IYX3 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
CCDC116Q8IYX3 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CCDC116Q8IYX3 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CCDC116Q8IYX3 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.41□□□□□ -1.86
CCDC116Q8IYX3 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.41□□□□□ -1.86
CCDC116Q8IYX3 SNORD46.1-201ENST00000364139 104 ntBASIC3.41□□□□□ -1.86
CCDC116Q8IYX3 RNA5SP139-201ENST00000364340 117 ntBASIC3.41□□□□□ -1.86
CCDC116Q8IYX3 SNORD114-6-201ENST00000364393 72 ntBASIC3.41□□□□□ -1.86
CCDC116Q8IYX3 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.41□□□□□ -1.86
CCDC116Q8IYX3 BTF3P4-201ENST00000418852 495 ntBASIC3.41□□□□□ -1.86
CCDC116Q8IYX3 RN7SL636P-201ENST00000497504 294 ntBASIC3.41□□□□□ -1.86
CCDC116Q8IYX3 RNU1-45P-201ENST00000517191 141 ntBASIC3.41□□□□□ -1.86
CCDC116Q8IYX3 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.41□□□□□ -1.86
CCDC116Q8IYX3 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.41□□□□□ -1.86
CCDC116Q8IYX3 AC019176.2-201ENST00000611579 315 ntBASIC3.41□□□□□ -1.86
CCDC116Q8IYX3 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.41□□□□□ -1.86
CCDC116Q8IYX3 AL161912.2-201ENST00000565707 3007 ntBASIC3.41□□□□□ -1.86
CCDC116Q8IYX3 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CCDC116Q8IYX3 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.41□□□□□ -1.86
CCDC116Q8IYX3 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CCDC116Q8IYX3 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.41□□□□□ -1.86
CCDC116Q8IYX3 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.4□□□□□ -1.86
CCDC116Q8IYX3 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
CCDC116Q8IYX3 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.4□□□□□ -1.86
CCDC116Q8IYX3 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.4□□□□□ -1.86
CCDC116Q8IYX3 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.4□□□□□ -1.87
CCDC116Q8IYX3 SNORA27-201ENST00000384323 126 ntBASIC3.4□□□□□ -1.87
CCDC116Q8IYX3 SNORA18-201ENST00000384416 132 ntBASIC3.4□□□□□ -1.87
CCDC116Q8IYX3 RNA5SP482-201ENST00000391269 118 ntBASIC3.4□□□□□ -1.87
CCDC116Q8IYX3 RNU2-63P-201ENST00000410792 194 ntBASIC3.4□□□□□ -1.87
CCDC116Q8IYX3 AL355297.2-201ENST00000604792 129 ntBASIC3.4□□□□□ -1.87
CCDC116Q8IYX3 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.4□□□□□ -1.87
CCDC116Q8IYX3 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.4□□□□□ -1.87
CCDC116Q8IYX3 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CCDC116Q8IYX3 MAPK10-322ENST00000641485 4530 ntBASIC3.39□□□□□ -1.87
CCDC116Q8IYX3 MFSD8-233ENST00000641482 4860 ntBASIC3.39□□□□□ -1.87
CCDC116Q8IYX3 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.39□□□□□ -1.87
CCDC116Q8IYX3 RNA5SP42-201ENST00000364278 115 ntBASIC3.39□□□□□ -1.87
CCDC116Q8IYX3 RNA5SP51-201ENST00000364750 119 ntBASIC3.39□□□□□ -1.87
CCDC116Q8IYX3 RNU6-283P-201ENST00000364788 107 ntBASIC3.39□□□□□ -1.87
CCDC116Q8IYX3 RNU6-60P-201ENST00000364792 103 ntBASIC3.39□□□□□ -1.87
CCDC116Q8IYX3 Y_RNA.333-201ENST00000365274 102 ntBASIC3.39□□□□□ -1.87
CCDC116Q8IYX3 RNU6-787P-201ENST00000384032 107 ntBASIC3.39□□□□□ -1.87
CCDC116Q8IYX3 RNU6-402P-201ENST00000410678 103 ntBASIC3.39□□□□□ -1.87
CCDC116Q8IYX3 SRIP3-201ENST00000413200 219 ntBASIC3.39□□□□□ -1.87
CCDC116Q8IYX3 AL035423.1-201ENST00000420331 213 ntBASIC3.39□□□□□ -1.87
CCDC116Q8IYX3 CST2P1-201ENST00000425770 87 ntBASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 165.5 ms