Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 MIR1248-201ENST00000629190 106 ntBASIC2.43□□□□□ -2.02
VRK3Q8IV63 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.43□□□□□ -2.02
VRK3Q8IV63 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
VRK3Q8IV63 AL136360.1-201ENST00000503377 1900 ntBASIC2.42□□□□□ -2.02
VRK3Q8IV63 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.42□□□□□ -2.02
VRK3Q8IV63 RNU6-235P-201ENST00000362644 107 ntBASIC2.42□□□□□ -2.02
VRK3Q8IV63 RNA5SP456-201ENST00000364002 114 ntBASIC2.42□□□□□ -2.02
VRK3Q8IV63 Y_RNA.294-201ENST00000364916 102 ntBASIC2.42□□□□□ -2.02
VRK3Q8IV63 SNORA40.5-201ENST00000391061 128 ntBASIC2.42□□□□□ -2.02
VRK3Q8IV63 Z96811.1-201ENST00000445880 108 ntBASIC2.42□□□□□ -2.02
VRK3Q8IV63 SNORD11-201ENST00000459124 84 ntBASIC2.42□□□□□ -2.02
VRK3Q8IV63 RPS29P12-201ENST00000460178 152 ntBASIC2.42□□□□□ -2.02
VRK3Q8IV63 AC090515.1-201ENST00000465295 476 ntBASIC2.42□□□□□ -2.02
VRK3Q8IV63 Y_RNA.692-201ENST00000516627 105 ntBASIC2.42□□□□□ -2.02
VRK3Q8IV63 Y_RNA.709-201ENST00000516952 92 ntBASIC2.42□□□□□ -2.02
VRK3Q8IV63 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.42□□□□□ -2.02
VRK3Q8IV63 MIR2681-201ENST00000581814 105 ntBASIC2.42□□□□□ -2.02
VRK3Q8IV63 AC131055.1-201ENST00000584626 316 ntBASIC2.42□□□□□ -2.02
VRK3Q8IV63 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.42□□□□□ -2.02
VRK3Q8IV63 AC010297.1-201ENST00000623948 149 ntBASIC2.42□□□□□ -2.02
VRK3Q8IV63 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
VRK3Q8IV63 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
VRK3Q8IV63 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
VRK3Q8IV63 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.41□□□□□ -2.02
VRK3Q8IV63 AC007336.1-201ENST00000576365 3828 ntBASIC2.41□□□□□ -2.02
VRK3Q8IV63 U8.1-201ENST00000362843 134 ntBASIC2.41□□□□□ -2.02
VRK3Q8IV63 RNU4-13P-201ENST00000364019 141 ntBASIC2.41□□□□□ -2.02
VRK3Q8IV63 Y_RNA.796-201ENST00000364268 102 ntBASIC2.41□□□□□ -2.02
VRK3Q8IV63 Y_RNA.634-201ENST00000364811 113 ntBASIC2.41□□□□□ -2.02
VRK3Q8IV63 Y_RNA.799-201ENST00000364992 102 ntBASIC2.41□□□□□ -2.02
VRK3Q8IV63 MIR562-201ENST00000384894 95 ntBASIC2.41□□□□□ -2.02
VRK3Q8IV63 AL603914.1-201ENST00000401964 204 ntBASIC2.41□□□□□ -2.02
VRK3Q8IV63 MIR1289-1-201ENST00000408836 144 ntBASIC2.41□□□□□ -2.02
VRK3Q8IV63 RPS4XP11-201ENST00000446897 772 ntBASIC2.41□□□□□ -2.02
VRK3Q8IV63 SEM1P1-201ENST00000506694 209 ntBASIC2.41□□□□□ -2.02
VRK3Q8IV63 MRPS36P2-201ENST00000512569 299 ntBASIC2.41□□□□□ -2.02
VRK3Q8IV63 AC097462.1-201ENST00000514125 324 ntBASIC2.41□□□□□ -2.02
VRK3Q8IV63 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.41□□□□□ -2.02
VRK3Q8IV63 RPL12P50-201ENST00000603116 116 ntBASIC2.41□□□□□ -2.02
VRK3Q8IV63 UCA1.1-201ENST00000620952 75 ntBASIC2.41□□□□□ -2.02
VRK3Q8IV63 U4.3-201ENST00000621047 82 ntBASIC2.41□□□□□ -2.02
VRK3Q8IV63 AC002064.3-201ENST00000623448 346 ntBASIC2.41□□□□□ -2.02
VRK3Q8IV63 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC2.41□□□□□ -2.02
VRK3Q8IV63 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.41□□□□□ -2.02
VRK3Q8IV63 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
VRK3Q8IV63 RNU6-1138P-201ENST00000365359 106 ntBASIC2.4□□□□□ -2.03
VRK3Q8IV63 MIR95-201ENST00000385072 81 ntBASIC2.4□□□□□ -2.03
VRK3Q8IV63 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.4□□□□□ -2.03
VRK3Q8IV63 AL357134.1-201ENST00000445848 426 ntBASIC2.4□□□□□ -2.03
VRK3Q8IV63 EEF1B2P7-201ENST00000451177 676 ntBASIC2.4□□□□□ -2.03
VRK3Q8IV63 RPS27P22-201ENST00000478056 241 ntBASIC2.4□□□□□ -2.03
VRK3Q8IV63 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.4□□□□□ -2.03
VRK3Q8IV63 RNU6-772P-201ENST00000516042 105 ntBASIC2.4□□□□□ -2.03
VRK3Q8IV63 RNU2-60P-201ENST00000517290 128 ntBASIC2.4□□□□□ -2.03
VRK3Q8IV63 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.4□□□□□ -2.03
VRK3Q8IV63 RPL23AP91-201ENST00000569211 455 ntBASIC2.4□□□□□ -2.03
VRK3Q8IV63 MIR3117-201ENST00000584034 78 ntBASIC2.4□□□□□ -2.03
VRK3Q8IV63 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.4□□□□□ -2.03
VRK3Q8IV63 MIR6129-201ENST00000616087 109 ntBASIC2.4□□□□□ -2.03
VRK3Q8IV63 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
VRK3Q8IV63 FO624990.1-201ENST00000636373 85 ntBASIC2.4□□□□□ -2.03
VRK3Q8IV63 U6.95-201ENST00000636931 70 ntBASIC2.4□□□□□ -2.03
VRK3Q8IV63 AC138915.1-201ENST00000565427 1685 ntBASIC2.39□□□□□ -2.03
VRK3Q8IV63 SNORA63.4-201ENST00000362763 126 ntBASIC2.39□□□□□ -2.03
VRK3Q8IV63 Y_RNA.91-201ENST00000363042 107 ntBASIC2.39□□□□□ -2.03
VRK3Q8IV63 RNU6-1209P-201ENST00000363655 107 ntBASIC2.39□□□□□ -2.03
VRK3Q8IV63 RNU6-1080P-201ENST00000383982 107 ntBASIC2.39□□□□□ -2.03
VRK3Q8IV63 Y_RNA.617-201ENST00000410920 90 ntBASIC2.39□□□□□ -2.03
VRK3Q8IV63 CYCTP-201ENST00000504253 315 ntBASIC2.39□□□□□ -2.03
VRK3Q8IV63 PRELID2P1-201ENST00000552837 301 ntBASIC2.39□□□□□ -2.03
VRK3Q8IV63 MIR4438-201ENST00000585271 93 ntBASIC2.39□□□□□ -2.03
VRK3Q8IV63 AC013412.1-201ENST00000610687 192 ntBASIC2.39□□□□□ -2.03
VRK3Q8IV63 U2.20-201ENST00000613956 192 ntBASIC2.39□□□□□ -2.03
VRK3Q8IV63 MIR7157-201ENST00000635801 60 ntBASIC2.39□□□□□ -2.03
VRK3Q8IV63 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.39□□□□□ -2.03
VRK3Q8IV63 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.38□□□□□ -2.03
VRK3Q8IV63 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.38□□□□□ -2.03
VRK3Q8IV63 MIR340-201ENST00000362125 95 ntBASIC2.38□□□□□ -2.03
VRK3Q8IV63 RNU6-1298P-201ENST00000362456 101 ntBASIC2.38□□□□□ -2.03
VRK3Q8IV63 Y_RNA.114-201ENST00000363265 113 ntBASIC2.38□□□□□ -2.03
VRK3Q8IV63 RNA5SP393-201ENST00000363423 117 ntBASIC2.38□□□□□ -2.03
VRK3Q8IV63 RNU1-96P-201ENST00000364163 162 ntBASIC2.38□□□□□ -2.03
VRK3Q8IV63 Y_RNA.332-201ENST00000365271 113 ntBASIC2.38□□□□□ -2.03
VRK3Q8IV63 RNU6-438P-201ENST00000365561 103 ntBASIC2.38□□□□□ -2.03
VRK3Q8IV63 RNU6-136P-201ENST00000384663 107 ntBASIC2.38□□□□□ -2.03
VRK3Q8IV63 FO393413.1-201ENST00000402892 195 ntBASIC2.38□□□□□ -2.03
VRK3Q8IV63 AL359511.1-201ENST00000402970 211 ntBASIC2.38□□□□□ -2.03
VRK3Q8IV63 AC080013.2-201ENST00000460866 323 ntBASIC2.38□□□□□ -2.03
VRK3Q8IV63 AC093259.1-201ENST00000509755 300 ntBASIC2.38□□□□□ -2.03
VRK3Q8IV63 RNU6-126P-201ENST00000516685 103 ntBASIC2.38□□□□□ -2.03
VRK3Q8IV63 SCARNA3-201ENST00000517097 143 ntBASIC2.38□□□□□ -2.03
VRK3Q8IV63 RNU7-172P-201ENST00000517125 64 ntBASIC2.38□□□□□ -2.03
VRK3Q8IV63 MIR4446-201ENST00000578505 67 ntBASIC2.38□□□□□ -2.03
VRK3Q8IV63 AL049779.4-201ENST00000604500 156 ntBASIC2.38□□□□□ -2.03
VRK3Q8IV63 U6.73-201ENST00000619194 103 ntBASIC2.38□□□□□ -2.03
VRK3Q8IV63 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
VRK3Q8IV63 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
VRK3Q8IV63 SNORA25.6-201ENST00000364121 118 ntBASIC2.37□□□□□ -2.03
VRK3Q8IV63 SNORA68.1-201ENST00000364537 132 ntBASIC2.37□□□□□ -2.03
VRK3Q8IV63 RNU1-138P-201ENST00000384093 164 ntBASIC2.37□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms