Protein–RNA interactions for Protein: Q7Z6J0

SH3RF1, E3 ubiquitin-protein ligase SH3RF1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1Q7Z6J0 AC093259.1-201ENST00000509755 300 ntBASIC3.76□□□□□ -1.81
SH3RF1Q7Z6J0 SCGB1D5P-201ENST00000515134 247 ntBASIC3.76□□□□□ -1.81
SH3RF1Q7Z6J0 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC3.76□□□□□ -1.81
SH3RF1Q7Z6J0 MIR4644-201ENST00000579929 84 ntBASIC3.76□□□□□ -1.81
SH3RF1Q7Z6J0 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.76□□□□□ -1.81
SH3RF1Q7Z6J0 MIR7106-201ENST00000612419 65 ntBASIC3.76□□□□□ -1.81
SH3RF1Q7Z6J0 IGLL4P-201ENST00000614590 133 ntBASIC3.76□□□□□ -1.81
SH3RF1Q7Z6J0 AC073476.4-201ENST00000628409 72 ntBASIC3.76□□□□□ -1.81
SH3RF1Q7Z6J0 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
SH3RF1Q7Z6J0 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.76□□□□□ -1.81
SH3RF1Q7Z6J0 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.75□□□□□ -1.81
SH3RF1Q7Z6J0 PWAR6-201ENST00000552334 4618 ntBASIC3.75□□□□□ -1.81
SH3RF1Q7Z6J0 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
SH3RF1Q7Z6J0 RNU1-70P-201ENST00000362618 164 ntBASIC3.75□□□□□ -1.81
SH3RF1Q7Z6J0 RNU6-1125P-201ENST00000363601 107 ntBASIC3.75□□□□□ -1.81
SH3RF1Q7Z6J0 RNU6-497P-201ENST00000365316 104 ntBASIC3.75□□□□□ -1.81
SH3RF1Q7Z6J0 SNORA2.2-201ENST00000365473 135 ntBASIC3.75□□□□□ -1.81
SH3RF1Q7Z6J0 MIR518F-201ENST00000384973 87 ntBASIC3.75□□□□□ -1.81
SH3RF1Q7Z6J0 HMGN1P18-201ENST00000457642 277 ntBASIC3.75□□□□□ -1.81
SH3RF1Q7Z6J0 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC3.75□□□□□ -1.81
SH3RF1Q7Z6J0 SCARNA23-201ENST00000516060 130 ntBASIC3.75□□□□□ -1.81
SH3RF1Q7Z6J0 RPL12P50-201ENST00000603116 116 ntBASIC3.75□□□□□ -1.81
SH3RF1Q7Z6J0 AL359075.3-201ENST00000613288 217 ntBASIC3.75□□□□□ -1.81
SH3RF1Q7Z6J0 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC3.75□□□□□ -1.81
SH3RF1Q7Z6J0 MIR5739-201ENST00000619803 80 ntBASIC3.75□□□□□ -1.81
SH3RF1Q7Z6J0 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
SH3RF1Q7Z6J0 MIR6079-201ENST00000635807 62 ntBASIC3.75□□□□□ -1.81
SH3RF1Q7Z6J0 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.75□□□□□ -1.81
SH3RF1Q7Z6J0 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.75□□□□□ -1.81
SH3RF1Q7Z6J0 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
SH3RF1Q7Z6J0 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.75□□□□□ -1.81
SH3RF1Q7Z6J0 AC091564.4-201ENST00000533934 2194 ntBASIC3.75□□□□□ -1.81
SH3RF1Q7Z6J0 MIR449A-201ENST00000362113 91 ntBASIC3.74□□□□□ -1.81
SH3RF1Q7Z6J0 Y_RNA.265-201ENST00000364677 108 ntBASIC3.74□□□□□ -1.81
SH3RF1Q7Z6J0 SNORA14A-201ENST00000364773 135 ntBASIC3.74□□□□□ -1.81
SH3RF1Q7Z6J0 AC073261.1-201ENST00000429409 121 ntBASIC3.74□□□□□ -1.81
SH3RF1Q7Z6J0 AC091826.1-201ENST00000514065 313 ntBASIC3.74□□□□□ -1.81
SH3RF1Q7Z6J0 RNU2-13P-201ENST00000515909 113 ntBASIC3.74□□□□□ -1.81
SH3RF1Q7Z6J0 RNU6-341P-201ENST00000516973 96 ntBASIC3.74□□□□□ -1.81
SH3RF1Q7Z6J0 AL358944.1-201ENST00000528537 144 ntBASIC3.74□□□□□ -1.81
SH3RF1Q7Z6J0 AC004486.1-201ENST00000546846 233 ntBASIC3.74□□□□□ -1.81
SH3RF1Q7Z6J0 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.74□□□□□ -1.81
SH3RF1Q7Z6J0 AC021443.1-201ENST00000604478 211 ntBASIC3.74□□□□□ -1.81
SH3RF1Q7Z6J0 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC3.74□□□□□ -1.81
SH3RF1Q7Z6J0 MIR7157-201ENST00000635801 60 ntBASIC3.74□□□□□ -1.81
SH3RF1Q7Z6J0 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.74□□□□□ -1.81
SH3RF1Q7Z6J0 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.74□□□□□ -1.81
SH3RF1Q7Z6J0 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
SH3RF1Q7Z6J0 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC3.73□□□□□ -1.81
SH3RF1Q7Z6J0 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
SH3RF1Q7Z6J0 snoU2-30.2-201ENST00000362805 70 ntBASIC3.73□□□□□ -1.81
SH3RF1Q7Z6J0 Y_RNA.332-201ENST00000365271 113 ntBASIC3.73□□□□□ -1.81
SH3RF1Q7Z6J0 SNORA4.2-201ENST00000365313 147 ntBASIC3.73□□□□□ -1.81
SH3RF1Q7Z6J0 RNU6-1189P-201ENST00000383958 107 ntBASIC3.73□□□□□ -1.81
SH3RF1Q7Z6J0 MIR548D2-201ENST00000384955 97 ntBASIC3.73□□□□□ -1.81
SH3RF1Q7Z6J0 MIR218-1-201ENST00000384999 110 ntBASIC3.73□□□□□ -1.81
SH3RF1Q7Z6J0 U8.17-201ENST00000391292 132 ntBASIC3.73□□□□□ -1.81
SH3RF1Q7Z6J0 RNA5SP229-201ENST00000410809 99 ntBASIC3.73□□□□□ -1.81
SH3RF1Q7Z6J0 RNU4-47P-201ENST00000410876 114 ntBASIC3.73□□□□□ -1.81
SH3RF1Q7Z6J0 RNA5SP57-201ENST00000459463 123 ntBASIC3.73□□□□□ -1.81
SH3RF1Q7Z6J0 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC3.73□□□□□ -1.81
SH3RF1Q7Z6J0 RNU6-857P-201ENST00000515893 110 ntBASIC3.73□□□□□ -1.81
SH3RF1Q7Z6J0 RNU1-143P-201ENST00000516296 146 ntBASIC3.73□□□□□ -1.81
SH3RF1Q7Z6J0 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC3.73□□□□□ -1.81
SH3RF1Q7Z6J0 DEFB131E-201ENST00000532329 154 ntBASIC3.73□□□□□ -1.81
SH3RF1Q7Z6J0 U1.23-201ENST00000610293 146 ntBASIC3.73□□□□□ -1.81
SH3RF1Q7Z6J0 RNU1-68P-201ENST00000615382 146 ntBASIC3.73□□□□□ -1.81
SH3RF1Q7Z6J0 U1.39-201ENST00000621562 146 ntBASIC3.73□□□□□ -1.81
SH3RF1Q7Z6J0 AL162726.3-218ENST00000636401 95 ntBASIC3.73□□□□□ -1.81
SH3RF1Q7Z6J0 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
SH3RF1Q7Z6J0 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
SH3RF1Q7Z6J0 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
SH3RF1Q7Z6J0 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.72□□□□□ -1.81
SH3RF1Q7Z6J0 Y_RNA.73-201ENST00000362910 113 ntBASIC3.72□□□□□ -1.81
SH3RF1Q7Z6J0 RNU4-36P-201ENST00000364294 144 ntBASIC3.72□□□□□ -1.81
SH3RF1Q7Z6J0 RNU6-675P-201ENST00000384236 104 ntBASIC3.72□□□□□ -1.81
SH3RF1Q7Z6J0 MIR548O-201ENST00000408583 114 ntBASIC3.72□□□□□ -1.81
SH3RF1Q7Z6J0 AC060773.1-201ENST00000421698 310 ntBASIC3.72□□□□□ -1.81
SH3RF1Q7Z6J0 AC107083.1-201ENST00000439643 279 ntBASIC3.72□□□□□ -1.81
SH3RF1Q7Z6J0 CYP2C59P-201ENST00000457790 269 ntBASIC3.72□□□□□ -1.81
SH3RF1Q7Z6J0 RNU6-991P-201ENST00000516168 107 ntBASIC3.72□□□□□ -1.81
SH3RF1Q7Z6J0 SCARNA3-201ENST00000517097 143 ntBASIC3.72□□□□□ -1.81
SH3RF1Q7Z6J0 MIR4666B-201ENST00000578142 81 ntBASIC3.72□□□□□ -1.81
SH3RF1Q7Z6J0 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.72□□□□□ -1.81
SH3RF1Q7Z6J0 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.72□□□□□ -1.81
SH3RF1Q7Z6J0 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
SH3RF1Q7Z6J0 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
SH3RF1Q7Z6J0 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
SH3RF1Q7Z6J0 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.71□□□□□ -1.81
SH3RF1Q7Z6J0 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC3.71□□□□□ -1.81
SH3RF1Q7Z6J0 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.71□□□□□ -1.82
SH3RF1Q7Z6J0 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
SH3RF1Q7Z6J0 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.71□□□□□ -1.82
SH3RF1Q7Z6J0 RNY3P2-201ENST00000362918 102 ntBASIC3.71□□□□□ -1.82
SH3RF1Q7Z6J0 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
SH3RF1Q7Z6J0 RNU6-979P-201ENST00000383896 107 ntBASIC3.71□□□□□ -1.82
SH3RF1Q7Z6J0 RNU6-788P-201ENST00000390967 104 ntBASIC3.71□□□□□ -1.82
SH3RF1Q7Z6J0 SNORA48.8-201ENST00000391324 134 ntBASIC3.71□□□□□ -1.82
SH3RF1Q7Z6J0 FO393413.1-201ENST00000402892 195 ntBASIC3.71□□□□□ -1.82
SH3RF1Q7Z6J0 RNA5SP293-201ENST00000410527 113 ntBASIC3.71□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms