Protein–RNA interactions for Protein: Q6ZSA7

LRRC55, Leucine-rich repeat-containing protein 55, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC55Q6ZSA7 POLR3GP1-201ENST00000594073 261 ntBASIC2.54□□□□□ -2
LRRC55Q6ZSA7 AL031274.2-201ENST00000599419 203 ntBASIC2.54□□□□□ -2
LRRC55Q6ZSA7 AL356280.1-201ENST00000603614 379 ntBASIC2.54□□□□□ -2
LRRC55Q6ZSA7 AC006435.5-201ENST00000624486 112 ntBASIC2.54□□□□□ -2
LRRC55Q6ZSA7 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.54□□□□□ -2
LRRC55Q6ZSA7 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.54□□□□□ -2
LRRC55Q6ZSA7 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
LRRC55Q6ZSA7 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.53□□□□□ -2
LRRC55Q6ZSA7 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.53□□□□□ -2
LRRC55Q6ZSA7 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.53□□□□□ -2
LRRC55Q6ZSA7 RNY1P11-201ENST00000363759 113 ntBASIC2.53□□□□□ -2
LRRC55Q6ZSA7 SNORD45.3-201ENST00000363836 72 ntBASIC2.53□□□□□ -2
LRRC55Q6ZSA7 SNORD116-14-201ENST00000383894 92 ntBASIC2.53□□□□□ -2
LRRC55Q6ZSA7 SNORD116-17-201ENST00000383929 92 ntBASIC2.53□□□□□ -2
LRRC55Q6ZSA7 SNORD116-15-201ENST00000384445 92 ntBASIC2.53□□□□□ -2
LRRC55Q6ZSA7 Y_RNA.542-201ENST00000384641 111 ntBASIC2.53□□□□□ -2
LRRC55Q6ZSA7 SNORD116-19-201ENST00000384729 92 ntBASIC2.53□□□□□ -2
LRRC55Q6ZSA7 Y_RNA.622-201ENST00000411091 108 ntBASIC2.53□□□□□ -2
LRRC55Q6ZSA7 Y_RNA.629-201ENST00000411368 105 ntBASIC2.53□□□□□ -2
LRRC55Q6ZSA7 AC003685.2-201ENST00000422795 395 ntBASIC2.53□□□□□ -2
LRRC55Q6ZSA7 HMGN2P18-201ENST00000450680 270 ntBASIC2.53□□□□□ -2
LRRC55Q6ZSA7 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.53□□□□□ -2
LRRC55Q6ZSA7 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.53□□□□□ -2
LRRC55Q6ZSA7 RNA5SP20-201ENST00000515976 84 ntBASIC2.53□□□□□ -2
LRRC55Q6ZSA7 SNORA48.11-201ENST00000517015 89 ntBASIC2.53□□□□□ -2
LRRC55Q6ZSA7 MIR4524B-201ENST00000581569 115 ntBASIC2.53□□□□□ -2
LRRC55Q6ZSA7 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.53□□□□□ -2
LRRC55Q6ZSA7 MIR6766-201ENST00000622641 72 ntBASIC2.53□□□□□ -2
LRRC55Q6ZSA7 MIR1248-201ENST00000629190 106 ntBASIC2.53□□□□□ -2
LRRC55Q6ZSA7 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.52□□□□□ -2.01
LRRC55Q6ZSA7 Y_RNA.71-201ENST00000362892 104 ntBASIC2.52□□□□□ -2.01
LRRC55Q6ZSA7 Y_RNA.127-201ENST00000363386 109 ntBASIC2.52□□□□□ -2.01
LRRC55Q6ZSA7 RNA5SP205-201ENST00000364653 136 ntBASIC2.52□□□□□ -2.01
LRRC55Q6ZSA7 RNU6-418P-201ENST00000384035 107 ntBASIC2.52□□□□□ -2.01
LRRC55Q6ZSA7 AC016909.1-201ENST00000415916 166 ntBASIC2.52□□□□□ -2.01
LRRC55Q6ZSA7 CYCSP49-201ENST00000420810 319 ntBASIC2.52□□□□□ -2.01
LRRC55Q6ZSA7 RNU6-437P-201ENST00000459408 95 ntBASIC2.52□□□□□ -2.01
LRRC55Q6ZSA7 AC092991.1-201ENST00000477176 376 ntBASIC2.52□□□□□ -2.01
LRRC55Q6ZSA7 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.52□□□□□ -2.01
LRRC55Q6ZSA7 MIR4769-201ENST00000584126 77 ntBASIC2.52□□□□□ -2.01
LRRC55Q6ZSA7 AC005972.2-201ENST00000604690 348 ntBASIC2.52□□□□□ -2.01
LRRC55Q6ZSA7 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.52□□□□□ -2.01
LRRC55Q6ZSA7 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.52□□□□□ -2.01
LRRC55Q6ZSA7 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.51□□□□□ -2.01
LRRC55Q6ZSA7 AC138915.1-201ENST00000565427 1685 ntBASIC2.51□□□□□ -2.01
LRRC55Q6ZSA7 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.51□□□□□ -2.01
LRRC55Q6ZSA7 Y_RNA.393-201ENST00000383936 102 ntBASIC2.51□□□□□ -2.01
LRRC55Q6ZSA7 RNU6-1323P-201ENST00000384025 107 ntBASIC2.51□□□□□ -2.01
LRRC55Q6ZSA7 Y_RNA.521-201ENST00000384560 114 ntBASIC2.51□□□□□ -2.01
LRRC55Q6ZSA7 MIR764-201ENST00000390811 85 ntBASIC2.51□□□□□ -2.01
LRRC55Q6ZSA7 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
LRRC55Q6ZSA7 RPL36AP21-201ENST00000490372 323 ntBASIC2.51□□□□□ -2.01
LRRC55Q6ZSA7 AC025647.1-201ENST00000517879 253 ntBASIC2.51□□□□□ -2.01
LRRC55Q6ZSA7 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.51□□□□□ -2.01
LRRC55Q6ZSA7 MIR3616-201ENST00000584070 92 ntBASIC2.51□□□□□ -2.01
LRRC55Q6ZSA7 5S_rRNA.13-201ENST00000622298 123 ntBASIC2.51□□□□□ -2.01
LRRC55Q6ZSA7 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
LRRC55Q6ZSA7 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
LRRC55Q6ZSA7 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.51□□□□□ -2.01
LRRC55Q6ZSA7 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
LRRC55Q6ZSA7 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.5□□□□□ -2.01
LRRC55Q6ZSA7 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.5□□□□□ -2.01
LRRC55Q6ZSA7 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.5□□□□□ -2.01
LRRC55Q6ZSA7 RNU1-91P-201ENST00000364746 163 ntBASIC2.5□□□□□ -2.01
LRRC55Q6ZSA7 RNU6-1240P-201ENST00000365155 104 ntBASIC2.5□□□□□ -2.01
LRRC55Q6ZSA7 SNORD20-201ENST00000384550 80 ntBASIC2.5□□□□□ -2.01
LRRC55Q6ZSA7 MIR1278-201ENST00000408753 81 ntBASIC2.5□□□□□ -2.01
LRRC55Q6ZSA7 RNU4-43P-201ENST00000410628 137 ntBASIC2.5□□□□□ -2.01
LRRC55Q6ZSA7 Z96811.1-201ENST00000445880 108 ntBASIC2.5□□□□□ -2.01
LRRC55Q6ZSA7 RPS27P1-201ENST00000450552 247 ntBASIC2.5□□□□□ -2.01
LRRC55Q6ZSA7 RNU7-116P-201ENST00000516940 62 ntBASIC2.5□□□□□ -2.01
LRRC55Q6ZSA7 AC015720.1-201ENST00000565251 277 ntBASIC2.5□□□□□ -2.01
LRRC55Q6ZSA7 AL355297.2-201ENST00000604792 129 ntBASIC2.5□□□□□ -2.01
LRRC55Q6ZSA7 MIR6844-201ENST00000637122 62 ntBASIC2.5□□□□□ -2.01
LRRC55Q6ZSA7 CENPCP1-201ENST00000533085 2578 ntBASIC2.5□□□□□ -2.01
LRRC55Q6ZSA7 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.49□□□□□ -2.01
LRRC55Q6ZSA7 RNU6-743P-201ENST00000364151 106 ntBASIC2.49□□□□□ -2.01
LRRC55Q6ZSA7 RNU4-41P-201ENST00000364426 143 ntBASIC2.49□□□□□ -2.01
LRRC55Q6ZSA7 RNU6-117P-201ENST00000365415 107 ntBASIC2.49□□□□□ -2.01
LRRC55Q6ZSA7 MIR539-201ENST00000365690 78 ntBASIC2.49□□□□□ -2.01
LRRC55Q6ZSA7 RNY3P5-201ENST00000384127 102 ntBASIC2.49□□□□□ -2.01
LRRC55Q6ZSA7 MIR561-201ENST00000385216 97 ntBASIC2.49□□□□□ -2.01
LRRC55Q6ZSA7 RNU6-588P-201ENST00000410281 105 ntBASIC2.49□□□□□ -2.01
LRRC55Q6ZSA7 RNA5SP511-201ENST00000410487 115 ntBASIC2.49□□□□□ -2.01
LRRC55Q6ZSA7 RN7SKP101-201ENST00000411376 320 ntBASIC2.49□□□□□ -2.01
LRRC55Q6ZSA7 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.49□□□□□ -2.01
LRRC55Q6ZSA7 HMGN2P3-201ENST00000433603 273 ntBASIC2.49□□□□□ -2.01
LRRC55Q6ZSA7 HMGN2P5-201ENST00000436882 273 ntBASIC2.49□□□□□ -2.01
LRRC55Q6ZSA7 AL357134.1-201ENST00000445848 426 ntBASIC2.49□□□□□ -2.01
LRRC55Q6ZSA7 AC010531.2-201ENST00000465012 153 ntBASIC2.49□□□□□ -2.01
LRRC55Q6ZSA7 RPS27P22-201ENST00000478056 241 ntBASIC2.49□□□□□ -2.01
LRRC55Q6ZSA7 SNORA4.4-201ENST00000515921 135 ntBASIC2.49□□□□□ -2.01
LRRC55Q6ZSA7 PRELID2P1-201ENST00000552837 301 ntBASIC2.49□□□□□ -2.01
LRRC55Q6ZSA7 MIR3646-201ENST00000578301 84 ntBASIC2.49□□□□□ -2.01
LRRC55Q6ZSA7 AC120024.3-201ENST00000603167 156 ntBASIC2.49□□□□□ -2.01
LRRC55Q6ZSA7 AC011603.4-201ENST00000611325 277 ntBASIC2.49□□□□□ -2.01
LRRC55Q6ZSA7 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
LRRC55Q6ZSA7 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.48□□□□□ -2.01
LRRC55Q6ZSA7 SNORD114-1-201ENST00000362705 72 ntBASIC2.48□□□□□ -2.01
LRRC55Q6ZSA7 RNU1-23P-201ENST00000363361 144 ntBASIC2.48□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 208.9 ms