Protein–RNA interactions for Protein: Q5TAT6

COL13A1, Collagen alpha-1(XIII) chain, humanhuman

Predicted RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1Q5TAT6 RNU6-283P-201ENST00000364788 107 ntBASIC3.35□□□□□ -1.87
COL13A1Q5TAT6 Y_RNA.332-201ENST00000365271 113 ntBASIC3.35□□□□□ -1.87
COL13A1Q5TAT6 Y_RNA.486-201ENST00000384398 107 ntBASIC3.35□□□□□ -1.87
COL13A1Q5TAT6 AL161788.1-201ENST00000441805 169 ntBASIC3.35□□□□□ -1.87
COL13A1Q5TAT6 Y_RNA.651-201ENST00000459380 103 ntBASIC3.35□□□□□ -1.87
COL13A1Q5TAT6 SEM1P1-201ENST00000506694 209 ntBASIC3.35□□□□□ -1.87
COL13A1Q5TAT6 RNU6-1096P-201ENST00000517089 102 ntBASIC3.35□□□□□ -1.87
COL13A1Q5TAT6 AC107294.3-201ENST00000609211 526 ntBASIC3.35□□□□□ -1.87
COL13A1Q5TAT6 U2.20-201ENST00000613956 192 ntBASIC3.35□□□□□ -1.87
COL13A1Q5TAT6 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC3.35□□□□□ -1.87
COL13A1Q5TAT6 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
COL13A1Q5TAT6 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.87
COL13A1Q5TAT6 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.34□□□□□ -1.87
COL13A1Q5TAT6 MAPK10-322ENST00000641485 4530 ntBASIC3.34□□□□□ -1.87
COL13A1Q5TAT6 RNU1-96P-201ENST00000364163 162 ntBASIC3.34□□□□□ -1.87
COL13A1Q5TAT6 RNU6-1292P-201ENST00000383856 107 ntBASIC3.34□□□□□ -1.87
COL13A1Q5TAT6 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
COL13A1Q5TAT6 AF228730.3-201ENST00000436691 102 ntBASIC3.34□□□□□ -1.87
COL13A1Q5TAT6 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC3.34□□□□□ -1.87
COL13A1Q5TAT6 AC007751.1-201ENST00000529260 376 ntBASIC3.34□□□□□ -1.87
COL13A1Q5TAT6 AL022345.2-201ENST00000606307 135 ntBASIC3.34□□□□□ -1.87
COL13A1Q5TAT6 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC3.34□□□□□ -1.87
COL13A1Q5TAT6 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC3.34□□□□□ -1.87
COL13A1Q5TAT6 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.88
COL13A1Q5TAT6 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.34□□□□□ -1.88
COL13A1Q5TAT6 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.34□□□□□ -1.88
COL13A1Q5TAT6 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
COL13A1Q5TAT6 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.33□□□□□ -1.88
COL13A1Q5TAT6 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.33□□□□□ -1.88
COL13A1Q5TAT6 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
COL13A1Q5TAT6 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
COL13A1Q5TAT6 RNU6-1255P-201ENST00000363434 112 ntBASIC3.33□□□□□ -1.88
COL13A1Q5TAT6 RNU1-112P-201ENST00000364401 164 ntBASIC3.33□□□□□ -1.88
COL13A1Q5TAT6 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
COL13A1Q5TAT6 RPS15AP28-201ENST00000435088 386 ntBASIC3.33□□□□□ -1.88
COL13A1Q5TAT6 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC3.33□□□□□ -1.88
COL13A1Q5TAT6 AL356280.1-201ENST00000603614 379 ntBASIC3.33□□□□□ -1.88
COL13A1Q5TAT6 AC025166.1-201ENST00000612411 163 ntBASIC3.33□□□□□ -1.88
COL13A1Q5TAT6 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC3.33□□□□□ -1.88
COL13A1Q5TAT6 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
COL13A1Q5TAT6 CTSLP2-204ENST00000629029 392 ntBASIC3.33□□□□□ -1.88
COL13A1Q5TAT6 MIR7153-201ENST00000637758 57 ntBASIC3.33□□□□□ -1.88
COL13A1Q5TAT6 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
COL13A1Q5TAT6 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
COL13A1Q5TAT6 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.32□□□□□ -1.88
COL13A1Q5TAT6 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
COL13A1Q5TAT6 Y_RNA.35-201ENST00000362601 101 ntBASIC3.32□□□□□ -1.88
COL13A1Q5TAT6 MIR9-1-201ENST00000385198 89 ntBASIC3.32□□□□□ -1.88
COL13A1Q5TAT6 FO393413.1-201ENST00000402892 195 ntBASIC3.32□□□□□ -1.88
COL13A1Q5TAT6 Y_RNA.649-201ENST00000459077 103 ntBASIC3.32□□□□□ -1.88
COL13A1Q5TAT6 HMGN1P7-201ENST00000491722 313 ntBASIC3.32□□□□□ -1.88
COL13A1Q5TAT6 RNU7-99P-201ENST00000516271 62 ntBASIC3.32□□□□□ -1.88
COL13A1Q5TAT6 SNORA48.11-201ENST00000517015 89 ntBASIC3.32□□□□□ -1.88
COL13A1Q5TAT6 PRELID2P1-201ENST00000552837 301 ntBASIC3.32□□□□□ -1.88
COL13A1Q5TAT6 MIR3199-1-201ENST00000582434 88 ntBASIC3.32□□□□□ -1.88
COL13A1Q5TAT6 AC007229.1-201ENST00000590455 412 ntBASIC3.32□□□□□ -1.88
COL13A1Q5TAT6 AC002064.3-201ENST00000623448 346 ntBASIC3.32□□□□□ -1.88
COL13A1Q5TAT6 MIR7515-201ENST00000637837 67 ntBASIC3.32□□□□□ -1.88
COL13A1Q5TAT6 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
COL13A1Q5TAT6 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.32□□□□□ -1.88
COL13A1Q5TAT6 AC092435.3-201ENST00000565538 3654 ntBASIC3.32□□□□□ -1.88
COL13A1Q5TAT6 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
COL13A1Q5TAT6 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
COL13A1Q5TAT6 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
COL13A1Q5TAT6 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
COL13A1Q5TAT6 AC108206.1-201ENST00000570186 4159 ntBASIC3.31□□□□□ -1.88
COL13A1Q5TAT6 RNU6-1164P-201ENST00000364428 107 ntBASIC3.31□□□□□ -1.88
COL13A1Q5TAT6 SNORD24-201ENST00000383884 75 ntBASIC3.31□□□□□ -1.88
COL13A1Q5TAT6 MIR218-1-201ENST00000384999 110 ntBASIC3.31□□□□□ -1.88
COL13A1Q5TAT6 RNU6-1328P-201ENST00000410938 106 ntBASIC3.31□□□□□ -1.88
COL13A1Q5TAT6 AL021397.1-201ENST00000451806 248 ntBASIC3.31□□□□□ -1.88
COL13A1Q5TAT6 AC006483.1-201ENST00000487308 313 ntBASIC3.31□□□□□ -1.88
COL13A1Q5TAT6 RNU6-113P-201ENST00000516653 101 ntBASIC3.31□□□□□ -1.88
COL13A1Q5TAT6 AL358944.1-201ENST00000528537 144 ntBASIC3.31□□□□□ -1.88
COL13A1Q5TAT6 AC087685.1-201ENST00000587507 141 ntBASIC3.31□□□□□ -1.88
COL13A1Q5TAT6 MIR6779-201ENST00000617283 64 ntBASIC3.31□□□□□ -1.88
COL13A1Q5TAT6 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
COL13A1Q5TAT6 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
COL13A1Q5TAT6 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
COL13A1Q5TAT6 AC018630.2-201ENST00000534866 2403 ntBASIC3.3□□□□□ -1.88
COL13A1Q5TAT6 Y_RNA.178-201ENST00000363832 102 ntBASIC3.3□□□□□ -1.88
COL13A1Q5TAT6 TRIAP1P1-201ENST00000427062 225 ntBASIC3.3□□□□□ -1.88
COL13A1Q5TAT6 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.3□□□□□ -1.88
COL13A1Q5TAT6 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC3.3□□□□□ -1.88
COL13A1Q5TAT6 RNU6-168P-201ENST00000516189 101 ntBASIC3.3□□□□□ -1.88
COL13A1Q5TAT6 RNU6-781P-201ENST00000516377 101 ntBASIC3.3□□□□□ -1.88
COL13A1Q5TAT6 Y_RNA.694-201ENST00000516677 117 ntBASIC3.3□□□□□ -1.88
COL13A1Q5TAT6 Y_RNA.714-201ENST00000517065 90 ntBASIC3.3□□□□□ -1.88
COL13A1Q5TAT6 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.3□□□□□ -1.88
COL13A1Q5TAT6 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
COL13A1Q5TAT6 MAPK10-362ENST00000641864 4484 ntBASIC3.3□□□□□ -1.88
COL13A1Q5TAT6 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
COL13A1Q5TAT6 SNORA68.1-201ENST00000364537 132 ntBASIC3.29□□□□□ -1.88
COL13A1Q5TAT6 Y_RNA.621-201ENST00000411065 96 ntBASIC3.29□□□□□ -1.88
COL13A1Q5TAT6 HMGN2P34-201ENST00000437647 269 ntBASIC3.29□□□□□ -1.88
COL13A1Q5TAT6 RNU6-412P-201ENST00000516434 106 ntBASIC3.29□□□□□ -1.88
COL13A1Q5TAT6 SNORA70.19-201ENST00000516717 90 ntBASIC3.29□□□□□ -1.88
COL13A1Q5TAT6 SNORA4-201ENST00000584302 138 ntBASIC3.29□□□□□ -1.88
COL13A1Q5TAT6 AC073413.2-201ENST00000604332 360 ntBASIC3.29□□□□□ -1.88
COL13A1Q5TAT6 AC022149.2-201ENST00000621061 203 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms