Protein–RNA interactions for Protein: Q16799

RTN1, Reticulon-1, humanhuman

Predictions only

Length 776 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1Q16799 RNU6-1292P-201ENST00000383856 107 ntBASIC3.38□□□□□ -1.87
RTN1Q16799 MIR128-1-201ENST00000384921 82 ntBASIC3.38□□□□□ -1.87
RTN1Q16799 MIR592-201ENST00000384959 97 ntBASIC3.38□□□□□ -1.87
RTN1Q16799 AL031121.1-201ENST00000406553 254 ntBASIC3.38□□□□□ -1.87
RTN1Q16799 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.38□□□□□ -1.87
RTN1Q16799 RN7SKP284-201ENST00000411002 343 ntBASIC3.38□□□□□ -1.87
RTN1Q16799 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC3.38□□□□□ -1.87
RTN1Q16799 RPS29P24-201ENST00000486345 171 ntBASIC3.38□□□□□ -1.87
RTN1Q16799 RNU6-762P-201ENST00000517107 102 ntBASIC3.38□□□□□ -1.87
RTN1Q16799 IGHVIII-67-2-201ENST00000519849 88 ntBASIC3.38□□□□□ -1.87
RTN1Q16799 IGKV1-22-201ENST00000524313 326 ntBASIC3.38□□□□□ -1.87
RTN1Q16799 AC008507.4-201ENST00000585464 127 ntBASIC3.38□□□□□ -1.87
RTN1Q16799 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
RTN1Q16799 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.37□□□□□ -1.87
RTN1Q16799 MIR126-201ENST00000362291 85 ntBASIC3.37□□□□□ -1.87
RTN1Q16799 RNU6-1131P-201ENST00000364955 107 ntBASIC3.37□□□□□ -1.87
RTN1Q16799 SNORD24-201ENST00000383884 75 ntBASIC3.37□□□□□ -1.87
RTN1Q16799 RNU6-905P-201ENST00000384434 107 ntBASIC3.37□□□□□ -1.87
RTN1Q16799 SNORA48.2-201ENST00000390926 124 ntBASIC3.37□□□□□ -1.87
RTN1Q16799 MIR1263-201ENST00000408324 86 ntBASIC3.37□□□□□ -1.87
RTN1Q16799 RNU6-554P-201ENST00000410466 106 ntBASIC3.37□□□□□ -1.87
RTN1Q16799 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.37□□□□□ -1.87
RTN1Q16799 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.37□□□□□ -1.87
RTN1Q16799 AP004217.1-201ENST00000480579 346 ntBASIC3.37□□□□□ -1.87
RTN1Q16799 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.37□□□□□ -1.87
RTN1Q16799 Y_RNA.666-201ENST00000516187 112 ntBASIC3.37□□□□□ -1.87
RTN1Q16799 RNU1-142P-201ENST00000516682 145 ntBASIC3.37□□□□□ -1.87
RTN1Q16799 RNU6-341P-201ENST00000516973 96 ntBASIC3.37□□□□□ -1.87
RTN1Q16799 Y_RNA.714-201ENST00000517065 90 ntBASIC3.37□□□□□ -1.87
RTN1Q16799 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.37□□□□□ -1.87
RTN1Q16799 AC096644.4-201ENST00000563417 2912 ntBASIC3.37□□□□□ -1.87
RTN1Q16799 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
RTN1Q16799 RNU6-888P-201ENST00000363010 101 ntBASIC3.36□□□□□ -1.87
RTN1Q16799 Y_RNA.242-201ENST00000364473 110 ntBASIC3.36□□□□□ -1.87
RTN1Q16799 SNORD21-201ENST00000383953 95 ntBASIC3.36□□□□□ -1.87
RTN1Q16799 RNU6-106P-201ENST00000384405 107 ntBASIC3.36□□□□□ -1.87
RTN1Q16799 RNU6-851P-201ENST00000384565 107 ntBASIC3.36□□□□□ -1.87
RTN1Q16799 SNORA44-201ENST00000384584 132 ntBASIC3.36□□□□□ -1.87
RTN1Q16799 RNA5SP323-201ENST00000391094 133 ntBASIC3.36□□□□□ -1.87
RTN1Q16799 SNORA48.8-201ENST00000391324 134 ntBASIC3.36□□□□□ -1.87
RTN1Q16799 EEF1A1P41-201ENST00000414667 207 ntBASIC3.36□□□□□ -1.87
RTN1Q16799 AL139132.1-201ENST00000431587 344 ntBASIC3.36□□□□□ -1.87
RTN1Q16799 AL353689.1-201ENST00000438895 199 ntBASIC3.36□□□□□ -1.87
RTN1Q16799 HMGN2P32-201ENST00000444648 269 ntBASIC3.36□□□□□ -1.87
RTN1Q16799 RNU6-693P-201ENST00000516134 107 ntBASIC3.36□□□□□ -1.87
RTN1Q16799 RNA5SP236-201ENST00000516169 116 ntBASIC3.36□□□□□ -1.87
RTN1Q16799 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC3.36□□□□□ -1.87
RTN1Q16799 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.36□□□□□ -1.87
RTN1Q16799 MIR338-201ENST00000636369 67 ntBASIC3.36□□□□□ -1.87
RTN1Q16799 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
RTN1Q16799 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
RTN1Q16799 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
RTN1Q16799 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.36□□□□□ -1.87
RTN1Q16799 U8.6-201ENST00000364939 135 ntBASIC3.35□□□□□ -1.87
RTN1Q16799 RNU6-49P-201ENST00000384256 107 ntBASIC3.35□□□□□ -1.87
RTN1Q16799 SNORA51.10-201ENST00000384418 136 ntBASIC3.35□□□□□ -1.87
RTN1Q16799 MIR802-201ENST00000390235 94 ntBASIC3.35□□□□□ -1.87
RTN1Q16799 SNORA74D-201ENST00000516404 141 ntBASIC3.35□□□□□ -1.87
RTN1Q16799 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.35□□□□□ -1.87
RTN1Q16799 AC087685.1-201ENST00000587507 141 ntBASIC3.35□□□□□ -1.87
RTN1Q16799 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
RTN1Q16799 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
RTN1Q16799 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
RTN1Q16799 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.35□□□□□ -1.87
RTN1Q16799 ZNF271P-202ENST00000465539 1970 ntBASIC3.34□□□□□ -1.87
RTN1Q16799 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC3.34□□□□□ -1.87
RTN1Q16799 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
RTN1Q16799 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.87
RTN1Q16799 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.87
RTN1Q16799 RNU6-640P-201ENST00000363693 105 ntBASIC3.34□□□□□ -1.87
RTN1Q16799 RNU6-220P-201ENST00000390919 107 ntBASIC3.34□□□□□ -1.87
RTN1Q16799 RNY4P29-201ENST00000410801 97 ntBASIC3.34□□□□□ -1.87
RTN1Q16799 RPL23AP83-201ENST00000434984 473 ntBASIC3.34□□□□□ -1.87
RTN1Q16799 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.34□□□□□ -1.87
RTN1Q16799 SNRPGP13-201ENST00000442212 177 ntBASIC3.34□□□□□ -1.87
RTN1Q16799 RNU6-1149P-201ENST00000516810 97 ntBASIC3.34□□□□□ -1.87
RTN1Q16799 AL358944.1-201ENST00000528537 144 ntBASIC3.34□□□□□ -1.87
RTN1Q16799 AL353149.1-201ENST00000610667 244 ntBASIC3.34□□□□□ -1.87
RTN1Q16799 AC106754.2-201ENST00000623006 233 ntBASIC3.34□□□□□ -1.87
RTN1Q16799 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
RTN1Q16799 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.34□□□□□ -1.88
RTN1Q16799 MIR512-1-201ENST00000384913 84 ntBASIC3.33□□□□□ -1.88
RTN1Q16799 AC007064.1-201ENST00000412238 351 ntBASIC3.33□□□□□ -1.88
RTN1Q16799 SRIP3-201ENST00000413200 219 ntBASIC3.33□□□□□ -1.88
RTN1Q16799 AC018868.1-201ENST00000491307 315 ntBASIC3.33□□□□□ -1.88
RTN1Q16799 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
RTN1Q16799 RNU6-294P-201ENST00000364999 102 ntBASIC3.32□□□□□ -1.88
RTN1Q16799 Y_RNA.348-201ENST00000365403 103 ntBASIC3.32□□□□□ -1.88
RTN1Q16799 SNORA8-201ENST00000384574 139 ntBASIC3.32□□□□□ -1.88
RTN1Q16799 Y_RNA.528-201ENST00000384575 108 ntBASIC3.32□□□□□ -1.88
RTN1Q16799 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC3.32□□□□□ -1.88
RTN1Q16799 TRIAP1P1-201ENST00000427062 225 ntBASIC3.32□□□□□ -1.88
RTN1Q16799 ATP5J2P3-201ENST00000451550 258 ntBASIC3.32□□□□□ -1.88
RTN1Q16799 RN7SKP282-201ENST00000516824 299 ntBASIC3.32□□□□□ -1.88
RTN1Q16799 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.32□□□□□ -1.88
RTN1Q16799 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC3.32□□□□□ -1.88
RTN1Q16799 AC005000.2-201ENST00000605468 310 ntBASIC3.32□□□□□ -1.88
RTN1Q16799 U6.108-201ENST00000637764 58 ntBASIC3.32□□□□□ -1.88
RTN1Q16799 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.32□□□□□ -1.88
RTN1Q16799 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms