Protein–RNA interactions for Protein: P62857

RPS28, 40S ribosomal protein S28, humanhuman

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28P62857 LRRC34P1-201ENST00000542742 915 ntBASIC-0.9□□□□□ -2.55
RPS28P62857 AC018448.1-201ENST00000552843 316 ntBASIC-0.9□□□□□ -2.55
RPS28P62857 AC006566.1-201ENST00000608943 513 ntBASIC-0.9□□□□□ -2.55
RPS28P62857 MTND1P7-201ENST00000632801 297 ntBASIC-0.9□□□□□ -2.55
RPS28P62857 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC-0.91□□□□□ -2.56
RPS28P62857 SNORD115-32-201ENST00000364079 82 ntBASIC-0.91□□□□□ -2.56
RPS28P62857 SNORD38C-201ENST00000384381 69 ntBASIC-0.91□□□□□ -2.56
RPS28P62857 RNU6-933P-201ENST00000384424 107 ntBASIC-0.91□□□□□ -2.56
RPS28P62857 MIR604-201ENST00000384880 94 ntBASIC-0.91□□□□□ -2.56
RPS28P62857 MIR522-201ENST00000385071 87 ntBASIC-0.91□□□□□ -2.56
RPS28P62857 MIR873-201ENST00000401120 77 ntBASIC-0.91□□□□□ -2.56
RPS28P62857 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC-0.91□□□□□ -2.56
RPS28P62857 AC109327.2-201ENST00000448339 378 ntBASIC-0.91□□□□□ -2.56
RPS28P62857 AC116353.2-201ENST00000505332 712 ntBASIC-0.91□□□□□ -2.56
RPS28P62857 AC074198.2-201ENST00000508153 258 ntBASIC-0.91□□□□□ -2.56
RPS28P62857 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC-0.91□□□□□ -2.56
RPS28P62857 AC046134.1-201ENST00000514454 666 ntBASIC-0.91□□□□□ -2.56
RPS28P62857 SCARNA11.2-201ENST00000517183 154 ntBASIC-0.91□□□□□ -2.56
RPS28P62857 AP001328.1-201ENST00000528550 176 ntBASIC-0.91□□□□□ -2.56
RPS28P62857 AL137161.1-201ENST00000532231 390 ntBASIC-0.91□□□□□ -2.56
RPS28P62857 AL136370.1-201ENST00000608166 691 ntBASIC-0.91□□□□□ -2.56
RPS28P62857 AC063944.3-201ENST00000609969 533 ntBASIC-0.91□□□□□ -2.56
RPS28P62857 uc_338.22-201ENST00000622722 187 ntBASIC-0.91□□□□□ -2.56
RPS28P62857 RNU6-1200P-201ENST00000384162 107 ntBASIC-0.92□□□□□ -2.56
RPS28P62857 Y_RNA.537-201ENST00000384626 109 ntBASIC-0.92□□□□□ -2.56
RPS28P62857 MIR196A1-201ENST00000388006 70 ntBASIC-0.92□□□□□ -2.56
RPS28P62857 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC-0.92□□□□□ -2.56
RPS28P62857 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.92□□□□□ -2.56
RPS28P62857 RNU6-1242P-201ENST00000391052 103 ntBASIC-0.92□□□□□ -2.56
RPS28P62857 MTCO3P40-201ENST00000392516 676 ntBASIC-0.92□□□□□ -2.56
RPS28P62857 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC-0.92□□□□□ -2.56
RPS28P62857 AL354751.2-201ENST00000415471 210 ntBASIC-0.92□□□□□ -2.56
RPS28P62857 MTATP6P26-201ENST00000445926 662 ntBASIC-0.92□□□□□ -2.56
RPS28P62857 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.92□□□□□ -2.56
RPS28P62857 MIR5589-201ENST00000579442 60 ntBASIC-0.92□□□□□ -2.56
RPS28P62857 MIR4802-201ENST00000581881 80 ntBASIC-0.92□□□□□ -2.56
RPS28P62857 AC087683.2-201ENST00000611384 326 ntBASIC-0.92□□□□□ -2.56
RPS28P62857 AC022306.2-201ENST00000617563 647 ntBASIC-0.92□□□□□ -2.56
RPS28P62857 SRP54-214ENST00000630962 162 ntTSL 5 BASIC-0.92□□□□□ -2.56
RPS28P62857 RNU4-73P-201ENST00000363164 141 ntBASIC-0.93□□□□□ -2.56
RPS28P62857 RNA5SP457-201ENST00000363657 124 ntBASIC-0.93□□□□□ -2.56
RPS28P62857 RNU6-1322P-201ENST00000364309 107 ntBASIC-0.93□□□□□ -2.56
RPS28P62857 AL590002.1-201ENST00000406554 418 ntBASIC-0.93□□□□□ -2.56
RPS28P62857 RNU2-29P-201ENST00000410423 189 ntBASIC-0.93□□□□□ -2.56
RPS28P62857 RNU6-325P-201ENST00000411132 105 ntBASIC-0.93□□□□□ -2.56
RPS28P62857 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC-0.93□□□□□ -2.56
RPS28P62857 RNA5SP169-201ENST00000517268 117 ntBASIC-0.93□□□□□ -2.56
RPS28P62857 UBL5P4-201ENST00000562584 236 ntBASIC-0.93□□□□□ -2.56
RPS28P62857 MIR5583-1-201ENST00000580941 59 ntBASIC-0.93□□□□□ -2.56
RPS28P62857 CLPTM1LP1-201ENST00000604519 484 ntBASIC-0.93□□□□□ -2.56
RPS28P62857 AC018714.1-201ENST00000605028 208 ntBASIC-0.93□□□□□ -2.56
RPS28P62857 AC016597.2-201ENST00000613256 341 ntBASIC-0.93□□□□□ -2.56
RPS28P62857 Y_RNA.253-201ENST00000364562 112 ntBASIC-0.94□□□□□ -2.56
RPS28P62857 RNY4P34-201ENST00000364779 95 ntBASIC-0.94□□□□□ -2.56
RPS28P62857 RNU6-131P-201ENST00000391144 107 ntBASIC-0.94□□□□□ -2.56
RPS28P62857 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC-0.94□□□□□ -2.56
RPS28P62857 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC-0.94□□□□□ -2.56
RPS28P62857 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC-0.94□□□□□ -2.56
RPS28P62857 AC010486.3-201ENST00000511602 785 ntBASIC-0.94□□□□□ -2.56
RPS28P62857 Z94722.1-201ENST00000604328 474 ntBASIC-0.94□□□□□ -2.56
RPS28P62857 AC245008.1-201ENST00000608123 476 ntBASIC-0.94□□□□□ -2.56
RPS28P62857 MIR6507-201ENST00000613630 70 ntBASIC-0.94□□□□□ -2.56
RPS28P62857 AL158209.2-201ENST00000619266 216 ntBASIC-0.94□□□□□ -2.56
RPS28P62857 Y_RNA.368-201ENST00000365547 113 ntBASIC-0.95□□□□□ -2.56
RPS28P62857 RNU6-1329P-201ENST00000365664 107 ntBASIC-0.95□□□□□ -2.56
RPS28P62857 MIR518F-201ENST00000384973 87 ntBASIC-0.95□□□□□ -2.56
RPS28P62857 RNU6-1000P-201ENST00000391066 106 ntBASIC-0.95□□□□□ -2.56
RPS28P62857 RPL30P16-201ENST00000419341 429 ntBASIC-0.95□□□□□ -2.56
RPS28P62857 RNU6-329P-201ENST00000459618 107 ntBASIC-0.95□□□□□ -2.56
RPS28P62857 RNU6-135P-201ENST00000516769 101 ntBASIC-0.95□□□□□ -2.56
RPS28P62857 AL157687.1-201ENST00000554853 619 ntBASIC-0.95□□□□□ -2.56
RPS28P62857 MIR4791-201ENST00000607666 84 ntBASIC-0.95□□□□□ -2.56
RPS28P62857 AC072046.2-201ENST00000618366 268 ntBASIC-0.95□□□□□ -2.56
RPS28P62857 AC134878.1-201ENST00000619901 243 ntBASIC-0.95□□□□□ -2.56
RPS28P62857 AC006927.3-201ENST00000638789 384 ntBASIC-0.95□□□□□ -2.56
RPS28P62857 RNU6-159P-201ENST00000391080 106 ntBASIC-0.96□□□□□ -2.56
RPS28P62857 SSR1P2-201ENST00000415208 787 ntBASIC-0.96□□□□□ -2.56
RPS28P62857 MCFD2P1-201ENST00000417812 300 ntBASIC-0.96□□□□□ -2.56
RPS28P62857 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC-0.96□□□□□ -2.56
RPS28P62857 Z82188.1-201ENST00000436709 154 ntBASIC-0.96□□□□□ -2.56
RPS28P62857 AL512286.1-201ENST00000439244 400 ntBASIC-0.96□□□□□ -2.56
RPS28P62857 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC-0.96□□□□□ -2.56
RPS28P62857 PIGPP4-201ENST00000584447 307 ntBASIC-0.96□□□□□ -2.56
RPS28P62857 AC087685.1-201ENST00000587507 141 ntBASIC-0.96□□□□□ -2.56
RPS28P62857 5S_rRNA.15-201ENST00000611169 127 ntBASIC-0.96□□□□□ -2.56
RPS28P62857 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC-0.96□□□□□ -2.56
RPS28P62857 AC009248.2-201ENST00000619826 254 ntBASIC-0.96□□□□□ -2.56
RPS28P62857 RNA5SP257-201ENST00000363023 116 ntBASIC-0.97□□□□□ -2.56
RPS28P62857 SNORD14E-201ENST00000364009 85 ntBASIC-0.97□□□□□ -2.56
RPS28P62857 RNU6-1048P-201ENST00000364054 107 ntBASIC-0.97□□□□□ -2.56
RPS28P62857 RNU6-1264P-201ENST00000383891 107 ntBASIC-0.97□□□□□ -2.56
RPS28P62857 RNU5A-6P-201ENST00000384136 116 ntBASIC-0.97□□□□□ -2.56
RPS28P62857 MIR215-201ENST00000384858 110 ntBASIC-0.97□□□□□ -2.56
RPS28P62857 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC-0.97□□□□□ -2.56
RPS28P62857 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC-0.97□□□□□ -2.56
RPS28P62857 AC091959.1-201ENST00000495857 238 ntBASIC-0.97□□□□□ -2.56
RPS28P62857 PRDX4P1-201ENST00000507189 574 ntBASIC-0.97□□□□□ -2.56
RPS28P62857 Y_RNA.666-201ENST00000516187 112 ntBASIC-0.97□□□□□ -2.56
RPS28P62857 Y_RNA.683-201ENST00000516508 93 ntBASIC-0.97□□□□□ -2.56
RPS28P62857 Y_RNA.714-201ENST00000517065 90 ntBASIC-0.97□□□□□ -2.56
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms