Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 AL590004.1-201ENST00000405321 300 ntBASIC1.92□□□□□ -2.1
NEK3P51956 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.92□□□□□ -2.1
NEK3P51956 AL731563.1-201ENST00000442202 214 ntBASIC1.92□□□□□ -2.1
NEK3P51956 HSPE1P25-201ENST00000455484 251 ntBASIC1.92□□□□□ -2.1
NEK3P51956 OR9P1P-201ENST00000496431 281 ntBASIC1.92□□□□□ -2.1
NEK3P51956 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.92□□□□□ -2.1
NEK3P51956 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
NEK3P51956 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
NEK3P51956 RNU6-290P-201ENST00000365212 101 ntBASIC1.91□□□□□ -2.1
NEK3P51956 MIR513A1-201ENST00000385138 129 ntBASIC1.91□□□□□ -2.1
NEK3P51956 MIR660-201ENST00000385235 97 ntBASIC1.91□□□□□ -2.1
NEK3P51956 ELOCP20-201ENST00000422460 345 ntBASIC1.91□□□□□ -2.1
NEK3P51956 LINC01399-202ENST00000458450 244 ntBASIC1.91□□□□□ -2.1
NEK3P51956 AC010655.3-201ENST00000478818 450 ntBASIC1.91□□□□□ -2.1
NEK3P51956 AC079140.2-201ENST00000506193 142 ntBASIC1.91□□□□□ -2.1
NEK3P51956 RNA5SP445-201ENST00000515889 115 ntBASIC1.91□□□□□ -2.1
NEK3P51956 RNU6-1137P-201ENST00000517073 99 ntBASIC1.91□□□□□ -2.1
NEK3P51956 RNU6-548P-201ENST00000517083 115 ntBASIC1.91□□□□□ -2.1
NEK3P51956 AC011604.1-201ENST00000545978 196 ntBASIC1.91□□□□□ -2.1
NEK3P51956 AC015712.3-201ENST00000559380 164 ntBASIC1.91□□□□□ -2.1
NEK3P51956 MIR4285-201ENST00000581001 85 ntBASIC1.91□□□□□ -2.1
NEK3P51956 AC022140.2-201ENST00000623500 188 ntBASIC1.91□□□□□ -2.1
NEK3P51956 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.91□□□□□ -2.1
NEK3P51956 Y_RNA.19-201ENST00000362462 99 ntBASIC1.9□□□□□ -2.11
NEK3P51956 Y_RNA.286-201ENST00000364813 102 ntBASIC1.9□□□□□ -2.11
NEK3P51956 SNORD1A-201ENST00000364968 72 ntBASIC1.9□□□□□ -2.11
NEK3P51956 RNU6-424P-201ENST00000384367 105 ntBASIC1.9□□□□□ -2.11
NEK3P51956 Y_RNA.569-201ENST00000384749 103 ntBASIC1.9□□□□□ -2.11
NEK3P51956 SNORA12.1-201ENST00000390873 148 ntBASIC1.9□□□□□ -2.11
NEK3P51956 SNORA53-201ENST00000391141 249 ntBASIC1.9□□□□□ -2.11
NEK3P51956 Y_RNA.602-201ENST00000410535 92 ntBASIC1.9□□□□□ -2.11
NEK3P51956 MRPS35P2-201ENST00000508242 191 ntBASIC1.9□□□□□ -2.11
NEK3P51956 RNY3P15-201ENST00000516297 97 ntBASIC1.9□□□□□ -2.11
NEK3P51956 AC136628.3-201ENST00000521868 290 ntBASIC1.9□□□□□ -2.11
NEK3P51956 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC1.9□□□□□ -2.11
NEK3P51956 AC037487.3-201ENST00000606668 112 ntBASIC1.9□□□□□ -2.11
NEK3P51956 MIR8063-201ENST00000621930 81 ntBASIC1.9□□□□□ -2.11
NEK3P51956 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
NEK3P51956 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.9□□□□□ -2.11
NEK3P51956 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
NEK3P51956 Y_RNA.172-201ENST00000363765 102 ntBASIC1.89□□□□□ -2.11
NEK3P51956 RNU6-694P-201ENST00000364071 147 ntBASIC1.89□□□□□ -2.11
NEK3P51956 RNU6-1160P-201ENST00000384546 104 ntBASIC1.89□□□□□ -2.11
NEK3P51956 SNORA40.18-201ENST00000391200 128 ntBASIC1.89□□□□□ -2.11
NEK3P51956 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.89□□□□□ -2.11
NEK3P51956 AP003357.1-201ENST00000604497 148 ntBASIC1.89□□□□□ -2.11
NEK3P51956 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.89□□□□□ -2.11
NEK3P51956 SNORD3E-202ENST00000627253 216 ntBASIC1.89□□□□□ -2.11
NEK3P51956 RNU6-326P-201ENST00000365480 107 ntBASIC1.88□□□□□ -2.11
NEK3P51956 RNU6-1065P-201ENST00000384513 106 ntBASIC1.88□□□□□ -2.11
NEK3P51956 RNU6-121P-201ENST00000410525 99 ntBASIC1.88□□□□□ -2.11
NEK3P51956 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.88□□□□□ -2.11
NEK3P51956 AC027119.1-201ENST00000440877 241 ntBASIC1.88□□□□□ -2.11
NEK3P51956 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.88□□□□□ -2.11
NEK3P51956 MIR4769-201ENST00000584126 77 ntBASIC1.88□□□□□ -2.11
NEK3P51956 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
NEK3P51956 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
NEK3P51956 RNA5SP432-201ENST00000362480 116 ntBASIC1.87□□□□□ -2.11
NEK3P51956 RNU4-80P-201ENST00000363200 141 ntBASIC1.87□□□□□ -2.11
NEK3P51956 U8.5-201ENST00000364528 136 ntBASIC1.87□□□□□ -2.11
NEK3P51956 RNU6-102P-201ENST00000384485 104 ntBASIC1.87□□□□□ -2.11
NEK3P51956 Y_RNA.621-201ENST00000411065 96 ntBASIC1.87□□□□□ -2.11
NEK3P51956 AC003989.2-201ENST00000440224 169 ntBASIC1.87□□□□□ -2.11
NEK3P51956 RNA5SP168-201ENST00000516642 112 ntBASIC1.87□□□□□ -2.11
NEK3P51956 AP003733.2-201ENST00000529409 171 ntBASIC1.87□□□□□ -2.11
NEK3P51956 MIR4762-201ENST00000585261 75 ntBASIC1.87□□□□□ -2.11
NEK3P51956 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.87□□□□□ -2.11
NEK3P51956 AL078604.3-201ENST00000615580 211 ntBASIC1.87□□□□□ -2.11
NEK3P51956 AC027279.3-201ENST00000625055 122 ntBASIC1.87□□□□□ -2.11
NEK3P51956 AC068647.2-201ENST00000637380 353 ntBASIC1.87□□□□□ -2.11
NEK3P51956 Y_RNA.105-201ENST00000363182 111 ntBASIC1.86□□□□□ -2.11
NEK3P51956 RNU4-41P-201ENST00000364426 143 ntBASIC1.86□□□□□ -2.11
NEK3P51956 SNORD48-201ENST00000364953 64 ntBASIC1.86□□□□□ -2.11
NEK3P51956 Y_RNA.418-201ENST00000384029 102 ntBASIC1.86□□□□□ -2.11
NEK3P51956 RNU6-482P-201ENST00000391068 107 ntBASIC1.86□□□□□ -2.11
NEK3P51956 RNU6ATAC19P-201ENST00000408096 110 ntBASIC1.86□□□□□ -2.11
NEK3P51956 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.86□□□□□ -2.11
NEK3P51956 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.86□□□□□ -2.11
NEK3P51956 AC107393.1-201ENST00000512403 346 ntBASIC1.86□□□□□ -2.11
NEK3P51956 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.86□□□□□ -2.11
NEK3P51956 RNU6-191P-201ENST00000516295 94 ntBASIC1.86□□□□□ -2.11
NEK3P51956 RNU7-115P-201ENST00000516433 55 ntBASIC1.86□□□□□ -2.11
NEK3P51956 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.86□□□□□ -2.11
NEK3P51956 RNU2-31P-201ENST00000516954 155 ntBASIC1.86□□□□□ -2.11
NEK3P51956 Y_RNA.714-201ENST00000517065 90 ntBASIC1.86□□□□□ -2.11
NEK3P51956 Y_RNA.720-201ENST00000517166 92 ntBASIC1.86□□□□□ -2.11
NEK3P51956 RNU6-902P-201ENST00000517212 91 ntBASIC1.86□□□□□ -2.11
NEK3P51956 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.86□□□□□ -2.11
NEK3P51956 MIR3145-201ENST00000580727 82 ntBASIC1.86□□□□□ -2.11
NEK3P51956 POLR3GP1-201ENST00000594073 261 ntBASIC1.86□□□□□ -2.11
NEK3P51956 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.86□□□□□ -2.11
NEK3P51956 Y_RNA.145-201ENST00000363527 102 ntBASIC1.85□□□□□ -2.11
NEK3P51956 SNORA16.1-201ENST00000364597 132 ntBASIC1.85□□□□□ -2.11
NEK3P51956 RNA5SP259-201ENST00000365541 109 ntBASIC1.85□□□□□ -2.11
NEK3P51956 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.85□□□□□ -2.11
NEK3P51956 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC1.85□□□□□ -2.11
NEK3P51956 SNX2P2-201ENST00000424553 323 ntBASIC1.85□□□□□ -2.11
NEK3P51956 Z98949.2-201ENST00000440996 144 ntBASIC1.85□□□□□ -2.11
NEK3P51956 CYCTP-201ENST00000504253 315 ntBASIC1.85□□□□□ -2.11
NEK3P51956 AC127455.1-201ENST00000565496 145 ntBASIC1.85□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 192 ms