Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC3.21□□□□□ -1.9
USP11P51784 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
USP11P51784 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.21□□□□□ -1.9
USP11P51784 Y_RNA.281-201ENST00000364774 94 ntBASIC3.2□□□□□ -1.9
USP11P51784 RNU6-365P-201ENST00000517113 106 ntBASIC3.2□□□□□ -1.9
USP11P51784 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
USP11P51784 ELOCP29-201ENST00000588193 334 ntBASIC3.2□□□□□ -1.9
USP11P51784 AL033523.1-201ENST00000605153 153 ntBASIC3.2□□□□□ -1.9
USP11P51784 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC3.2□□□□□ -1.9
USP11P51784 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
USP11P51784 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.19□□□□□ -1.9
USP11P51784 RNU6-905P-201ENST00000384434 107 ntBASIC3.19□□□□□ -1.9
USP11P51784 RNU6-1328P-201ENST00000410938 106 ntBASIC3.19□□□□□ -1.9
USP11P51784 CALM2P4-201ENST00000430810 426 ntBASIC3.19□□□□□ -1.9
USP11P51784 AC018634.1-201ENST00000437554 401 ntBASIC3.19□□□□□ -1.9
USP11P51784 RNU6-586P-201ENST00000517265 104 ntBASIC3.19□□□□□ -1.9
USP11P51784 RNU6-537P-201ENST00000517277 103 ntBASIC3.19□□□□□ -1.9
USP11P51784 MIR4662B-201ENST00000579498 81 ntBASIC3.19□□□□□ -1.9
USP11P51784 AC106754.2-201ENST00000623006 233 ntBASIC3.19□□□□□ -1.9
USP11P51784 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.19□□□□□ -1.9
USP11P51784 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
USP11P51784 RNU6-486P-201ENST00000363116 107 ntBASIC3.18□□□□□ -1.9
USP11P51784 SNORA5B-201ENST00000363786 132 ntBASIC3.18□□□□□ -1.9
USP11P51784 RNU6-1107P-201ENST00000364817 104 ntBASIC3.18□□□□□ -1.9
USP11P51784 Y_RNA.348-201ENST00000365403 103 ntBASIC3.18□□□□□ -1.9
USP11P51784 RNU6-438P-201ENST00000365561 103 ntBASIC3.18□□□□□ -1.9
USP11P51784 Y_RNA.528-201ENST00000384575 108 ntBASIC3.18□□□□□ -1.9
USP11P51784 Y_RNA.549-201ENST00000384657 102 ntBASIC3.18□□□□□ -1.9
USP11P51784 MIR181B1-201ENST00000385240 110 ntBASIC3.18□□□□□ -1.9
USP11P51784 RN7SKP284-201ENST00000411002 343 ntBASIC3.18□□□□□ -1.9
USP11P51784 AC087499.2-201ENST00000432861 149 ntBASIC3.18□□□□□ -1.9
USP11P51784 RNU2-34P-201ENST00000516534 121 ntBASIC3.18□□□□□ -1.9
USP11P51784 RNU6-1096P-201ENST00000517089 102 ntBASIC3.18□□□□□ -1.9
USP11P51784 U6.73-201ENST00000619194 103 ntBASIC3.18□□□□□ -1.9
USP11P51784 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
USP11P51784 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
USP11P51784 MIR26A1-201ENST00000362205 77 ntBASIC3.17□□□□□ -1.9
USP11P51784 RNU6-640P-201ENST00000363693 105 ntBASIC3.17□□□□□ -1.9
USP11P51784 SNORD61-201ENST00000384252 73 ntBASIC3.17□□□□□ -1.9
USP11P51784 MTATP6P21-201ENST00000440681 189 ntBASIC3.17□□□□□ -1.9
USP11P51784 MRPS17P9-201ENST00000511924 393 ntBASIC3.17□□□□□ -1.9
USP11P51784 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.17□□□□□ -1.9
USP11P51784 RNU6-504P-201ENST00000516568 104 ntBASIC3.17□□□□□ -1.9
USP11P51784 RNU6-844P-201ENST00000517175 102 ntBASIC3.17□□□□□ -1.9
USP11P51784 AC007012.1-201ENST00000567192 175 ntBASIC3.17□□□□□ -1.9
USP11P51784 U2.20-201ENST00000613956 192 ntBASIC3.17□□□□□ -1.9
USP11P51784 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.17□□□□□ -1.9
USP11P51784 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
USP11P51784 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
USP11P51784 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
USP11P51784 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.16□□□□□ -1.9
USP11P51784 MIR340-201ENST00000362125 95 ntBASIC3.16□□□□□ -1.9
USP11P51784 RNU6-1292P-201ENST00000383856 107 ntBASIC3.16□□□□□ -1.9
USP11P51784 SNORD21-201ENST00000383953 95 ntBASIC3.16□□□□□ -1.9
USP11P51784 RNU6-1083P-201ENST00000384022 107 ntBASIC3.16□□□□□ -1.9
USP11P51784 RNA5SP492-201ENST00000411330 114 ntBASIC3.16□□□□□ -1.9
USP11P51784 AC105272.1-201ENST00000438604 198 ntBASIC3.16□□□□□ -1.9
USP11P51784 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC3.16□□□□□ -1.9
USP11P51784 AC091826.1-201ENST00000514065 313 ntBASIC3.16□□□□□ -1.9
USP11P51784 AC096725.1-201ENST00000514266 313 ntBASIC3.16□□□□□ -1.9
USP11P51784 RNU6-126P-201ENST00000516685 103 ntBASIC3.16□□□□□ -1.9
USP11P51784 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.16□□□□□ -1.9
USP11P51784 MIR7515-201ENST00000637837 67 ntBASIC3.16□□□□□ -1.9
USP11P51784 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
USP11P51784 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
USP11P51784 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.9
USP11P51784 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
USP11P51784 Y_RNA.85-201ENST00000363014 111 ntBASIC3.15□□□□□ -1.91
USP11P51784 SNORD56.5-201ENST00000364281 72 ntBASIC3.15□□□□□ -1.91
USP11P51784 SNORD73B-201ENST00000364394 72 ntBASIC3.15□□□□□ -1.91
USP11P51784 RNA5SP125-201ENST00000364843 120 ntBASIC3.15□□□□□ -1.91
USP11P51784 SNORD72-201ENST00000390994 80 ntBASIC3.15□□□□□ -1.91
USP11P51784 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.15□□□□□ -1.91
USP11P51784 SCARNA15-202ENST00000516881 127 ntBASIC3.15□□□□□ -1.91
USP11P51784 RNA5SP490-201ENST00000517141 136 ntBASIC3.15□□□□□ -1.91
USP11P51784 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC3.15□□□□□ -1.91
USP11P51784 MIR3605-201ENST00000583214 100 ntBASIC3.15□□□□□ -1.91
USP11P51784 ZNF861P-201ENST00000588126 639 ntBASIC3.15□□□□□ -1.91
USP11P51784 JPX_2.1-201ENST00000614161 69 ntBASIC3.15□□□□□ -1.91
USP11P51784 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
USP11P51784 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
USP11P51784 MAPK10-266ENST00000641066 6555 ntBASIC3.14□□□□□ -1.91
USP11P51784 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
USP11P51784 MIR9-1-201ENST00000385198 89 ntBASIC3.14□□□□□ -1.91
USP11P51784 SNORD12C-201ENST00000386307 89 ntBASIC3.14□□□□□ -1.91
USP11P51784 AL138827.1-201ENST00000402666 306 ntBASIC3.14□□□□□ -1.91
USP11P51784 MIR1302-4-201ENST00000408701 150 ntBASIC3.14□□□□□ -1.91
USP11P51784 AC003982.1-202ENST00000469928 248 ntBASIC3.14□□□□□ -1.91
USP11P51784 RN7SKP132-201ENST00000516001 208 ntBASIC3.14□□□□□ -1.91
USP11P51784 RNU6-412P-201ENST00000516434 106 ntBASIC3.14□□□□□ -1.91
USP11P51784 RNU6-1270P-201ENST00000517128 108 ntBASIC3.14□□□□□ -1.91
USP11P51784 IGHVIII-67-2-201ENST00000519849 88 ntBASIC3.14□□□□□ -1.91
USP11P51784 AC079600.2-201ENST00000550076 130 ntBASIC3.14□□□□□ -1.91
USP11P51784 AC009831.4-201ENST00000620744 325 ntBASIC3.14□□□□□ -1.91
USP11P51784 MIR376A2-201ENST00000636782 80 ntBASIC3.14□□□□□ -1.91
USP11P51784 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
USP11P51784 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.13□□□□□ -1.91
USP11P51784 AC108206.1-201ENST00000570186 4159 ntBASIC3.13□□□□□ -1.91
USP11P51784 RNU6-888P-201ENST00000363010 101 ntBASIC3.13□□□□□ -1.91
USP11P51784 RNU1-96P-201ENST00000364163 162 ntBASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms