Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 RNA5SP51-201ENST00000364750 119 ntBASIC3.34□□□□□ -1.87
RNF144AP50876 RNU6-1276P-201ENST00000365372 104 ntBASIC3.34□□□□□ -1.87
RNF144AP50876 RNU6-409P-201ENST00000384114 104 ntBASIC3.34□□□□□ -1.87
RNF144AP50876 AC004941.2-201ENST00000427009 228 ntBASIC3.34□□□□□ -1.87
RNF144AP50876 TRIAP1P1-201ENST00000427062 225 ntBASIC3.34□□□□□ -1.87
RNF144AP50876 AL109933.2-201ENST00000452651 260 ntBASIC3.34□□□□□ -1.87
RNF144AP50876 AL163195.1-201ENST00000496941 348 ntBASIC3.34□□□□□ -1.87
RNF144AP50876 RNA5SP164-201ENST00000516533 110 ntBASIC3.34□□□□□ -1.87
RNF144AP50876 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.34□□□□□ -1.87
RNF144AP50876 AC023632.4-201ENST00000517783 191 ntBASIC3.34□□□□□ -1.87
RNF144AP50876 AL356280.1-201ENST00000603614 379 ntBASIC3.34□□□□□ -1.87
RNF144AP50876 AL513534.2-201ENST00000603836 250 ntBASIC3.34□□□□□ -1.87
RNF144AP50876 FAS-AS1.2-201ENST00000620386 170 ntBASIC3.34□□□□□ -1.87
RNF144AP50876 CTSLP2-204ENST00000629029 392 ntBASIC3.34□□□□□ -1.87
RNF144AP50876 MIR203B-201ENST00000636080 86 ntBASIC3.34□□□□□ -1.87
RNF144AP50876 MIR1255B1-201ENST00000636325 63 ntBASIC3.34□□□□□ -1.87
RNF144AP50876 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.87
RNF144AP50876 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.33□□□□□ -1.88
RNF144AP50876 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
RNF144AP50876 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
RNF144AP50876 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.33□□□□□ -1.88
RNF144AP50876 RNU6-661P-201ENST00000362409 107 ntBASIC3.33□□□□□ -1.88
RNF144AP50876 RNU6-363P-201ENST00000362895 105 ntBASIC3.33□□□□□ -1.88
RNF144AP50876 Y_RNA.73-201ENST00000362910 113 ntBASIC3.33□□□□□ -1.88
RNF144AP50876 Y_RNA.360-201ENST00000365512 102 ntBASIC3.33□□□□□ -1.88
RNF144AP50876 MIR577-201ENST00000385196 96 ntBASIC3.33□□□□□ -1.88
RNF144AP50876 AL035423.1-201ENST00000420331 213 ntBASIC3.33□□□□□ -1.88
RNF144AP50876 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.33□□□□□ -1.88
RNF144AP50876 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.33□□□□□ -1.88
RNF144AP50876 RNA5SP395-201ENST00000516567 118 ntBASIC3.33□□□□□ -1.88
RNF144AP50876 IGHVII-40-1-201ENST00000517316 58 ntBASIC3.33□□□□□ -1.88
RNF144AP50876 AL355297.2-201ENST00000604792 129 ntBASIC3.33□□□□□ -1.88
RNF144AP50876 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.33□□□□□ -1.88
RNF144AP50876 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
RNF144AP50876 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
RNF144AP50876 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
RNF144AP50876 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
RNF144AP50876 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
RNF144AP50876 MIR554-201ENST00000384874 96 ntBASIC3.32□□□□□ -1.88
RNF144AP50876 MIR515-2-201ENST00000384883 83 ntBASIC3.32□□□□□ -1.88
RNF144AP50876 MIR515-1-201ENST00000384884 83 ntBASIC3.32□□□□□ -1.88
RNF144AP50876 RNU2-63P-201ENST00000410792 194 ntBASIC3.32□□□□□ -1.88
RNF144AP50876 AL022718.1-201ENST00000412004 84 ntBASIC3.32□□□□□ -1.88
RNF144AP50876 AC096949.1-201ENST00000412047 152 ntBASIC3.32□□□□□ -1.88
RNF144AP50876 AL512326.2-201ENST00000426359 151 ntBASIC3.32□□□□□ -1.88
RNF144AP50876 AL035398.1-201ENST00000430869 322 ntBASIC3.32□□□□□ -1.88
RNF144AP50876 ATP5J2P3-201ENST00000451550 258 ntBASIC3.32□□□□□ -1.88
RNF144AP50876 RN7SL542P-201ENST00000467147 294 ntBASIC3.32□□□□□ -1.88
RNF144AP50876 RPS23P4-201ENST00000487908 423 ntBASIC3.32□□□□□ -1.88
RNF144AP50876 AC104619.4-201ENST00000510773 249 ntBASIC3.32□□□□□ -1.88
RNF144AP50876 AC091826.1-201ENST00000514065 313 ntBASIC3.32□□□□□ -1.88
RNF144AP50876 RNA5SP367-201ENST00000516557 118 ntBASIC3.32□□□□□ -1.88
RNF144AP50876 AC024995.1-201ENST00000523014 93 ntBASIC3.32□□□□□ -1.88
RNF144AP50876 Y_RNA.773-201ENST00000607168 90 ntBASIC3.32□□□□□ -1.88
RNF144AP50876 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
RNF144AP50876 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.32□□□□□ -1.88
RNF144AP50876 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC3.32□□□□□ -1.88
RNF144AP50876 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
RNF144AP50876 SNORD9-201ENST00000362566 104 ntBASIC3.31□□□□□ -1.88
RNF144AP50876 RNA5SP139-201ENST00000364340 117 ntBASIC3.31□□□□□ -1.88
RNF144AP50876 RNU4-67P-201ENST00000364569 141 ntBASIC3.31□□□□□ -1.88
RNF144AP50876 MIR134-201ENST00000385258 73 ntBASIC3.31□□□□□ -1.88
RNF144AP50876 AL451046.2-201ENST00000403074 277 ntBASIC3.31□□□□□ -1.88
RNF144AP50876 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.31□□□□□ -1.88
RNF144AP50876 RNA5SP144-201ENST00000410846 116 ntBASIC3.31□□□□□ -1.88
RNF144AP50876 TRBV12-1-201ENST00000479785 344 ntBASIC3.31□□□□□ -1.88
RNF144AP50876 RNU6-667P-201ENST00000517186 102 ntBASIC3.31□□□□□ -1.88
RNF144AP50876 AC004812.1-201ENST00000540773 146 ntBASIC3.31□□□□□ -1.88
RNF144AP50876 MIR5187-201ENST00000583479 76 ntBASIC3.31□□□□□ -1.88
RNF144AP50876 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC3.31□□□□□ -1.88
RNF144AP50876 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.31□□□□□ -1.88
RNF144AP50876 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
RNF144AP50876 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
RNF144AP50876 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
RNF144AP50876 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
RNF144AP50876 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC3.3□□□□□ -1.88
RNF144AP50876 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
RNF144AP50876 SNORD115-19-201ENST00000363098 82 ntBASIC3.3□□□□□ -1.88
RNF144AP50876 SNORD115-18-201ENST00000363293 82 ntBASIC3.3□□□□□ -1.88
RNF144AP50876 Y_RNA.244-201ENST00000364484 109 ntBASIC3.3□□□□□ -1.88
RNF144AP50876 SNORD115-17-201ENST00000364612 82 ntBASIC3.3□□□□□ -1.88
RNF144AP50876 AL359837.1-201ENST00000381357 287 ntBASIC3.3□□□□□ -1.88
RNF144AP50876 SNORA18-201ENST00000384416 132 ntBASIC3.3□□□□□ -1.88
RNF144AP50876 MIR605-201ENST00000385078 83 ntBASIC3.3□□□□□ -1.88
RNF144AP50876 MIR561-201ENST00000385216 97 ntBASIC3.3□□□□□ -1.88
RNF144AP50876 RNA5SP482-201ENST00000391269 118 ntBASIC3.3□□□□□ -1.88
RNF144AP50876 RNU6ATAC-201ENST00000408749 126 ntBASIC3.3□□□□□ -1.88
RNF144AP50876 RN7SKP27-201ENST00000410684 333 ntBASIC3.3□□□□□ -1.88
RNF144AP50876 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC3.3□□□□□ -1.88
RNF144AP50876 AC092185.1-201ENST00000491371 97 ntBASIC3.3□□□□□ -1.88
RNF144AP50876 MIR548Z-201ENST00000584743 97 ntBASIC3.3□□□□□ -1.88
RNF144AP50876 AC006130.2-201ENST00000586202 326 ntBASIC3.3□□□□□ -1.88
RNF144AP50876 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC3.3□□□□□ -1.88
RNF144AP50876 AC064859.1-201ENST00000624741 174 ntBASIC3.3□□□□□ -1.88
RNF144AP50876 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.3□□□□□ -1.88
RNF144AP50876 MFSD8-233ENST00000641482 4860 ntBASIC3.3□□□□□ -1.88
RNF144AP50876 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
RNF144AP50876 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
RNF144AP50876 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
RNF144AP50876 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 110.9 ms