Protein–RNA interactions for Protein: P41002

CCNF, Cyclin-F, humanhuman

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNFP41002 SNORA9.3-201ENST00000516383 129 ntBASIC2.85□□□□□ -1.95
CCNFP41002 AC022217.4-201ENST00000604389 163 ntBASIC2.85□□□□□ -1.95
CCNFP41002 AC022202.1-201ENST00000613515 211 ntBASIC2.85□□□□□ -1.95
CCNFP41002 TUG1_4.1-201ENST00000619464 181 ntBASIC2.85□□□□□ -1.95
CCNFP41002 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
CCNFP41002 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.85□□□□□ -1.95
CCNFP41002 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.85□□□□□ -1.95
CCNFP41002 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
CCNFP41002 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.84□□□□□ -1.95
CCNFP41002 ZNF271P-202ENST00000465539 1970 ntBASIC2.84□□□□□ -1.95
CCNFP41002 RNA5SP493-201ENST00000364115 91 ntBASIC2.84□□□□□ -1.95
CCNFP41002 Y_RNA.261-201ENST00000364631 102 ntBASIC2.84□□□□□ -1.95
CCNFP41002 Y_RNA.634-201ENST00000364811 113 ntBASIC2.84□□□□□ -1.95
CCNFP41002 RNU1-148P-201ENST00000384472 162 ntBASIC2.84□□□□□ -1.95
CCNFP41002 RNU6-1168P-201ENST00000390831 104 ntBASIC2.84□□□□□ -1.95
CCNFP41002 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.84□□□□□ -1.95
CCNFP41002 AC008267.6-201ENST00000441664 139 ntBASIC2.84□□□□□ -1.95
CCNFP41002 S100A11P2-201ENST00000467589 312 ntBASIC2.84□□□□□ -1.95
CCNFP41002 TRBV12-1-201ENST00000479785 344 ntBASIC2.84□□□□□ -1.95
CCNFP41002 HMGN1P7-201ENST00000491722 313 ntBASIC2.84□□□□□ -1.95
CCNFP41002 RPL23AP94-201ENST00000512518 302 ntBASIC2.84□□□□□ -1.95
CCNFP41002 SCGB1D5P-201ENST00000515134 247 ntBASIC2.84□□□□□ -1.95
CCNFP41002 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.84□□□□□ -1.95
CCNFP41002 MIR3605-201ENST00000583214 100 ntBASIC2.84□□□□□ -1.95
CCNFP41002 AC091178.2-201ENST00000584401 117 ntBASIC2.84□□□□□ -1.95
CCNFP41002 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.84□□□□□ -1.96
CCNFP41002 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.84□□□□□ -1.96
CCNFP41002 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
CCNFP41002 Y_RNA.71-201ENST00000362892 104 ntBASIC2.83□□□□□ -1.96
CCNFP41002 Y_RNA.253-201ENST00000364562 112 ntBASIC2.83□□□□□ -1.96
CCNFP41002 RNU6-597P-201ENST00000365620 102 ntBASIC2.83□□□□□ -1.96
CCNFP41002 MIR539-201ENST00000365690 78 ntBASIC2.83□□□□□ -1.96
CCNFP41002 MIR562-201ENST00000384894 95 ntBASIC2.83□□□□□ -1.96
CCNFP41002 Y_RNA.584-201ENST00000391090 114 ntBASIC2.83□□□□□ -1.96
CCNFP41002 AL117342.1-201ENST00000404861 406 ntBASIC2.83□□□□□ -1.96
CCNFP41002 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.83□□□□□ -1.96
CCNFP41002 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.83□□□□□ -1.96
CCNFP41002 AL163195.1-201ENST00000496941 348 ntBASIC2.83□□□□□ -1.96
CCNFP41002 RNU6-826P-201ENST00000516827 104 ntBASIC2.83□□□□□ -1.96
CCNFP41002 AC004486.1-201ENST00000546846 233 ntBASIC2.83□□□□□ -1.96
CCNFP41002 MIR4658-201ENST00000584344 65 ntBASIC2.83□□□□□ -1.96
CCNFP41002 AL353149.1-201ENST00000610667 244 ntBASIC2.83□□□□□ -1.96
CCNFP41002 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC2.83□□□□□ -1.96
CCNFP41002 U6.108-201ENST00000637764 58 ntBASIC2.83□□□□□ -1.96
CCNFP41002 AP006437.1-201ENST00000641440 3685 ntBASIC2.82□□□□□ -1.96
CCNFP41002 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
CCNFP41002 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.82□□□□□ -1.96
CCNFP41002 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
CCNFP41002 Y_RNA.218-201ENST00000364218 104 ntBASIC2.82□□□□□ -1.96
CCNFP41002 RNU6-915P-201ENST00000364943 103 ntBASIC2.82□□□□□ -1.96
CCNFP41002 MIR29C-201ENST00000385231 88 ntBASIC2.82□□□□□ -1.96
CCNFP41002 AC018634.1-201ENST00000437554 401 ntBASIC2.82□□□□□ -1.96
CCNFP41002 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.82□□□□□ -1.96
CCNFP41002 RNU6-1333P-201ENST00000516162 93 ntBASIC2.82□□□□□ -1.96
CCNFP41002 RNA5SP153-201ENST00000516498 76 ntBASIC2.82□□□□□ -1.96
CCNFP41002 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.82□□□□□ -1.96
CCNFP41002 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.82□□□□□ -1.96
CCNFP41002 ICE2P2-201ENST00000483823 2787 ntBASIC2.82□□□□□ -1.96
CCNFP41002 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.81□□□□□ -1.96
CCNFP41002 MIR126-201ENST00000362291 85 ntBASIC2.81□□□□□ -1.96
CCNFP41002 SNORA25.6-201ENST00000364121 118 ntBASIC2.81□□□□□ -1.96
CCNFP41002 RNU6-978P-201ENST00000364371 103 ntBASIC2.81□□□□□ -1.96
CCNFP41002 Y_RNA.486-201ENST00000384398 107 ntBASIC2.81□□□□□ -1.96
CCNFP41002 SNORA26-201ENST00000391286 122 ntBASIC2.81□□□□□ -1.96
CCNFP41002 HMGN2P35-201ENST00000412164 270 ntBASIC2.81□□□□□ -1.96
CCNFP41002 EEF1A1P41-201ENST00000414667 207 ntBASIC2.81□□□□□ -1.96
CCNFP41002 COTL1P1-201ENST00000422309 375 ntBASIC2.81□□□□□ -1.96
CCNFP41002 AL049830.1-201ENST00000468034 425 ntBASIC2.81□□□□□ -1.96
CCNFP41002 RNU6-341P-201ENST00000516973 96 ntBASIC2.81□□□□□ -1.96
CCNFP41002 EIF4BP1-201ENST00000554881 351 ntBASIC2.81□□□□□ -1.96
CCNFP41002 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC2.81□□□□□ -1.96
CCNFP41002 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
CCNFP41002 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
CCNFP41002 AL365361.1-201ENST00000566942 3481 ntBASIC2.81□□□□□ -1.96
CCNFP41002 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
CCNFP41002 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
CCNFP41002 MIR26A1-201ENST00000362205 77 ntBASIC2.8□□□□□ -1.96
CCNFP41002 MIR515-2-201ENST00000384883 83 ntBASIC2.8□□□□□ -1.96
CCNFP41002 MIR515-1-201ENST00000384884 83 ntBASIC2.8□□□□□ -1.96
CCNFP41002 RNU6-735P-201ENST00000410612 107 ntBASIC2.8□□□□□ -1.96
CCNFP41002 CST2P1-201ENST00000425770 87 ntBASIC2.8□□□□□ -1.96
CCNFP41002 NDUFA4P2-201ENST00000489989 244 ntBASIC2.8□□□□□ -1.96
CCNFP41002 RNA5SP137-201ENST00000516833 135 ntBASIC2.8□□□□□ -1.96
CCNFP41002 RNU6-365P-201ENST00000517113 106 ntBASIC2.8□□□□□ -1.96
CCNFP41002 MIR4662B-201ENST00000579498 81 ntBASIC2.8□□□□□ -1.96
CCNFP41002 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
CCNFP41002 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.8□□□□□ -1.96
CCNFP41002 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.8□□□□□ -1.96
CCNFP41002 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.8□□□□□ -1.96
CCNFP41002 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
CCNFP41002 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
CCNFP41002 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.79□□□□□ -1.96
CCNFP41002 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
CCNFP41002 SNORA1B-201ENST00000362535 133 ntBASIC2.79□□□□□ -1.96
CCNFP41002 SNORD68-201ENST00000363214 84 ntBASIC2.79□□□□□ -1.96
CCNFP41002 RNU6-1164P-201ENST00000364428 107 ntBASIC2.79□□□□□ -1.96
CCNFP41002 Y_RNA.251-201ENST00000364551 99 ntBASIC2.79□□□□□ -1.96
CCNFP41002 RNU1-109P-201ENST00000383960 147 ntBASIC2.79□□□□□ -1.96
CCNFP41002 MIR802-201ENST00000390235 94 ntBASIC2.79□□□□□ -1.96
CCNFP41002 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 116.4 ms