Protein–RNA interactions for Protein: P16499

PDE6A, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6AP16499 RNU1-109P-201ENST00000383960 147 ntBASIC2.74□□□□□ -1.97
PDE6AP16499 RNU6-1228P-201ENST00000391014 107 ntBASIC2.74□□□□□ -1.97
PDE6AP16499 RNU2-51P-201ENST00000410708 197 ntBASIC2.74□□□□□ -1.97
PDE6AP16499 AC007064.1-201ENST00000412238 351 ntBASIC2.74□□□□□ -1.97
PDE6AP16499 EDDM3CP-201ENST00000415977 425 ntBASIC2.74□□□□□ -1.97
PDE6AP16499 RNU1-131P-201ENST00000458943 161 ntBASIC2.74□□□□□ -1.97
PDE6AP16499 AC011406.1-201ENST00000512440 370 ntBASIC2.74□□□□□ -1.97
PDE6AP16499 RNU6-426P-201ENST00000516464 97 ntBASIC2.74□□□□□ -1.97
PDE6AP16499 RNU7-172P-201ENST00000517125 64 ntBASIC2.74□□□□□ -1.97
PDE6AP16499 AC015720.1-201ENST00000565251 277 ntBASIC2.74□□□□□ -1.97
PDE6AP16499 DNAJC19P2-201ENST00000593340 302 ntBASIC2.74□□□□□ -1.97
PDE6AP16499 U6.73-201ENST00000619194 103 ntBASIC2.74□□□□□ -1.97
PDE6AP16499 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
PDE6AP16499 MIR6073-201ENST00000352083 89 ntBASIC2.73□□□□□ -1.97
PDE6AP16499 Y_RNA.229-201ENST00000364347 113 ntBASIC2.73□□□□□ -1.97
PDE6AP16499 RNU6-257P-201ENST00000410238 98 ntBASIC2.73□□□□□ -1.97
PDE6AP16499 RN7SKP223-201ENST00000410582 62 ntBASIC2.73□□□□□ -1.97
PDE6AP16499 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.73□□□□□ -1.97
PDE6AP16499 HMGN2P34-201ENST00000437647 269 ntBASIC2.73□□□□□ -1.97
PDE6AP16499 AL353689.1-201ENST00000438895 199 ntBASIC2.73□□□□□ -1.97
PDE6AP16499 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC2.73□□□□□ -1.97
PDE6AP16499 RNU6-62P-201ENST00000516526 102 ntBASIC2.73□□□□□ -1.97
PDE6AP16499 MIR4298-201ENST00000584380 73 ntBASIC2.73□□□□□ -1.97
PDE6AP16499 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
PDE6AP16499 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.72□□□□□ -1.97
PDE6AP16499 snoU2-30.2-201ENST00000362805 70 ntBASIC2.72□□□□□ -1.97
PDE6AP16499 RNY3P5-201ENST00000384127 102 ntBASIC2.72□□□□□ -1.97
PDE6AP16499 MIR1278-201ENST00000408753 81 ntBASIC2.72□□□□□ -1.97
PDE6AP16499 AL356320.1-201ENST00000429616 163 ntBASIC2.72□□□□□ -1.97
PDE6AP16499 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.72□□□□□ -1.97
PDE6AP16499 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC2.72□□□□□ -1.97
PDE6AP16499 RPL23AP54-201ENST00000495129 419 ntBASIC2.72□□□□□ -1.97
PDE6AP16499 AC091895.1-201ENST00000624494 256 ntBASIC2.72□□□□□ -1.97
PDE6AP16499 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.72□□□□□ -1.97
PDE6AP16499 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
PDE6AP16499 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
PDE6AP16499 AC080100.1-201ENST00000624239 5356 ntBASIC2.71□□□□□ -1.98
PDE6AP16499 RNU6-674P-201ENST00000363831 107 ntBASIC2.71□□□□□ -1.98
PDE6AP16499 RNU1-96P-201ENST00000364163 162 ntBASIC2.71□□□□□ -1.98
PDE6AP16499 Y_RNA.337-201ENST00000365312 102 ntBASIC2.71□□□□□ -1.98
PDE6AP16499 SNORA72-201ENST00000384339 132 ntBASIC2.71□□□□□ -1.98
PDE6AP16499 RNU6-160P-201ENST00000384591 107 ntBASIC2.71□□□□□ -1.98
PDE6AP16499 MIR221-201ENST00000385135 110 ntBASIC2.71□□□□□ -1.98
PDE6AP16499 RNU6-1168P-201ENST00000390831 104 ntBASIC2.71□□□□□ -1.98
PDE6AP16499 MIR1262-201ENST00000408276 93 ntBASIC2.71□□□□□ -1.98
PDE6AP16499 RNU4-43P-201ENST00000410628 137 ntBASIC2.71□□□□□ -1.98
PDE6AP16499 RN7SKP284-201ENST00000411002 343 ntBASIC2.71□□□□□ -1.98
PDE6AP16499 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC2.71□□□□□ -1.98
PDE6AP16499 AC245102.2-201ENST00000448956 180 ntBASIC2.71□□□□□ -1.98
PDE6AP16499 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC2.71□□□□□ -1.98
PDE6AP16499 AC245047.8-201ENST00000456455 284 ntBASIC2.71□□□□□ -1.98
PDE6AP16499 RNU6-437P-201ENST00000459408 95 ntBASIC2.71□□□□□ -1.98
PDE6AP16499 RPS29P21-201ENST00000496272 170 ntBASIC2.71□□□□□ -1.98
PDE6AP16499 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.71□□□□□ -1.98
PDE6AP16499 RNU6-1007P-201ENST00000516586 107 ntBASIC2.71□□□□□ -1.98
PDE6AP16499 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.71□□□□□ -1.98
PDE6AP16499 AL353149.1-201ENST00000610667 244 ntBASIC2.71□□□□□ -1.98
PDE6AP16499 AC010332.2-201ENST00000613083 1904 ntBASIC2.71□□□□□ -1.98
PDE6AP16499 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
PDE6AP16499 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.7□□□□□ -1.98
PDE6AP16499 SNORD114-6-201ENST00000364393 72 ntBASIC2.7□□□□□ -1.98
PDE6AP16499 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC2.7□□□□□ -1.98
PDE6AP16499 RNU6-136P-201ENST00000384663 107 ntBASIC2.7□□□□□ -1.98
PDE6AP16499 RNU6-1072P-201ENST00000384703 107 ntBASIC2.7□□□□□ -1.98
PDE6AP16499 RNU6-417P-201ENST00000384712 107 ntBASIC2.7□□□□□ -1.98
PDE6AP16499 RNU6-443P-201ENST00000384780 107 ntBASIC2.7□□□□□ -1.98
PDE6AP16499 MT-TT-201ENST00000387460 66 ntBASIC2.7□□□□□ -1.98
PDE6AP16499 RNA5SP425-201ENST00000410336 112 ntBASIC2.7□□□□□ -1.98
PDE6AP16499 RNU6-383P-201ENST00000410864 94 ntBASIC2.7□□□□□ -1.98
PDE6AP16499 RNU6-1041P-201ENST00000516254 102 ntBASIC2.7□□□□□ -1.98
PDE6AP16499 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC2.7□□□□□ -1.98
PDE6AP16499 AC010297.1-201ENST00000623948 149 ntBASIC2.7□□□□□ -1.98
PDE6AP16499 RNU1-91P-201ENST00000364746 163 ntBASIC2.69□□□□□ -1.98
PDE6AP16499 SNORD50B-201ENST00000364995 70 ntBASIC2.69□□□□□ -1.98
PDE6AP16499 RNU6-643P-201ENST00000384018 107 ntBASIC2.69□□□□□ -1.98
PDE6AP16499 SNORA70B-201ENST00000384210 135 ntBASIC2.69□□□□□ -1.98
PDE6AP16499 RNU11-5P-201ENST00000391216 129 ntBASIC2.69□□□□□ -1.98
PDE6AP16499 AL606845.1-201ENST00000404881 255 ntBASIC2.69□□□□□ -1.98
PDE6AP16499 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.69□□□□□ -1.98
PDE6AP16499 RNU6-561P-201ENST00000516222 102 ntBASIC2.69□□□□□ -1.98
PDE6AP16499 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC2.69□□□□□ -1.98
PDE6AP16499 MIR1273D-201ENST00000577266 86 ntBASIC2.69□□□□□ -1.98
PDE6AP16499 AC026271.5-201ENST00000577873 130 ntBASIC2.69□□□□□ -1.98
PDE6AP16499 AC007229.1-201ENST00000590455 412 ntBASIC2.69□□□□□ -1.98
PDE6AP16499 MIR3658-201ENST00000636291 56 ntBASIC2.69□□□□□ -1.98
PDE6AP16499 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC2.69□□□□□ -1.98
PDE6AP16499 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
PDE6AP16499 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
PDE6AP16499 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
PDE6AP16499 RNU4-11P-201ENST00000365287 132 ntBASIC2.68□□□□□ -1.98
PDE6AP16499 MIR15B-201ENST00000385045 98 ntBASIC2.68□□□□□ -1.98
PDE6AP16499 SNORA40-201ENST00000388090 126 ntBASIC2.68□□□□□ -1.98
PDE6AP16499 RPL30P13-201ENST00000418873 348 ntBASIC2.68□□□□□ -1.98
PDE6AP16499 RPS4XP11-201ENST00000446897 772 ntBASIC2.68□□□□□ -1.98
PDE6AP16499 AL121914.1-201ENST00000450188 156 ntBASIC2.68□□□□□ -1.98
PDE6AP16499 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.68□□□□□ -1.98
PDE6AP16499 RNU7-197P-201ENST00000458836 62 ntBASIC2.68□□□□□ -1.98
PDE6AP16499 RNU7-99P-201ENST00000516271 62 ntBASIC2.68□□□□□ -1.98
PDE6AP16499 RNU6-313P-201ENST00000516317 112 ntBASIC2.68□□□□□ -1.98
PDE6AP16499 CYCSP26-201ENST00000534107 320 ntBASIC2.68□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 116.9 ms