Protein–RNA interactions for Protein: P05556

ITGB1, Integrin beta-1, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1P05556 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
ITGB1P05556 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.6□□□□□ -1.99
ITGB1P05556 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
ITGB1P05556 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.59□□□□□ -1.99
ITGB1P05556 Y_RNA.218-201ENST00000364218 104 ntBASIC2.59□□□□□ -1.99
ITGB1P05556 Y_RNA.337-201ENST00000365312 102 ntBASIC2.59□□□□□ -1.99
ITGB1P05556 RNU6-1235P-201ENST00000384559 107 ntBASIC2.59□□□□□ -1.99
ITGB1P05556 MIR873-201ENST00000401120 77 ntBASIC2.59□□□□□ -1.99
ITGB1P05556 SNORA36B-201ENST00000410438 131 ntBASIC2.59□□□□□ -1.99
ITGB1P05556 RNU2-63P-201ENST00000410792 194 ntBASIC2.59□□□□□ -1.99
ITGB1P05556 RNU6-57P-201ENST00000411348 103 ntBASIC2.59□□□□□ -1.99
ITGB1P05556 RPL30P13-201ENST00000418873 348 ntBASIC2.59□□□□□ -1.99
ITGB1P05556 HMGN2P3-201ENST00000433603 273 ntBASIC2.59□□□□□ -1.99
ITGB1P05556 HMGN2P5-201ENST00000436882 273 ntBASIC2.59□□□□□ -1.99
ITGB1P05556 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
ITGB1P05556 RNU6-498P-201ENST00000459468 107 ntBASIC2.59□□□□□ -1.99
ITGB1P05556 RNU7-115P-201ENST00000516433 55 ntBASIC2.59□□□□□ -1.99
ITGB1P05556 RNU2-34P-201ENST00000516534 121 ntBASIC2.59□□□□□ -1.99
ITGB1P05556 RNA5SP490-201ENST00000517141 136 ntBASIC2.59□□□□□ -1.99
ITGB1P05556 AC012640.5-201ENST00000623897 319 ntBASIC2.59□□□□□ -1.99
ITGB1P05556 ZNF702P-202ENST00000434269 1966 ntBASIC2.59□□□□□ -2
ITGB1P05556 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.59□□□□□ -2
ITGB1P05556 AC007336.1-201ENST00000576365 3828 ntBASIC2.58□□□□□ -2
ITGB1P05556 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.58□□□□□ -2
ITGB1P05556 SNORA27.1-201ENST00000362604 124 ntBASIC2.58□□□□□ -2
ITGB1P05556 RNU6-199P-201ENST00000362954 107 ntBASIC2.58□□□□□ -2
ITGB1P05556 Y_RNA.81-201ENST00000362997 102 ntBASIC2.58□□□□□ -2
ITGB1P05556 RNU6-144P-201ENST00000383951 107 ntBASIC2.58□□□□□ -2
ITGB1P05556 RNU6-643P-201ENST00000384018 107 ntBASIC2.58□□□□□ -2
ITGB1P05556 AC011753.1-201ENST00000451001 220 ntBASIC2.58□□□□□ -2
ITGB1P05556 SNORD65B-201ENST00000459126 73 ntBASIC2.58□□□□□ -2
ITGB1P05556 AC010531.2-201ENST00000465012 153 ntBASIC2.58□□□□□ -2
ITGB1P05556 CKS1BP2-201ENST00000497342 240 ntBASIC2.58□□□□□ -2
ITGB1P05556 AC108210.2-201ENST00000503681 201 ntBASIC2.58□□□□□ -2
ITGB1P05556 AC026436.1-201ENST00000510537 270 ntBASIC2.58□□□□□ -2
ITGB1P05556 RNU6-948P-201ENST00000516374 107 ntBASIC2.58□□□□□ -2
ITGB1P05556 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
ITGB1P05556 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.58□□□□□ -2
ITGB1P05556 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.57□□□□□ -2
ITGB1P05556 AL356292.1-201ENST00000283110 373 ntBASIC2.57□□□□□ -2
ITGB1P05556 SNORD114-1-201ENST00000362705 72 ntBASIC2.57□□□□□ -2
ITGB1P05556 Y_RNA.332-201ENST00000365271 113 ntBASIC2.57□□□□□ -2
ITGB1P05556 RNU6-438P-201ENST00000365561 103 ntBASIC2.57□□□□□ -2
ITGB1P05556 RNU6-418P-201ENST00000384035 107 ntBASIC2.57□□□□□ -2
ITGB1P05556 Y_RNA.420-201ENST00000384043 110 ntBASIC2.57□□□□□ -2
ITGB1P05556 Y_RNA.542-201ENST00000384641 111 ntBASIC2.57□□□□□ -2
ITGB1P05556 RNU6-376P-201ENST00000384731 106 ntBASIC2.57□□□□□ -2
ITGB1P05556 SNORD37.2-201ENST00000391075 66 ntBASIC2.57□□□□□ -2
ITGB1P05556 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.57□□□□□ -2
ITGB1P05556 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC2.57□□□□□ -2
ITGB1P05556 AC008267.6-201ENST00000441664 139 ntBASIC2.57□□□□□ -2
ITGB1P05556 RNU6-1211P-201ENST00000459179 105 ntBASIC2.57□□□□□ -2
ITGB1P05556 RPS26P55-201ENST00000471178 356 ntBASIC2.57□□□□□ -2
ITGB1P05556 AC018868.1-201ENST00000491307 315 ntBASIC2.57□□□□□ -2
ITGB1P05556 RNU6-63P-201ENST00000516690 95 ntBASIC2.57□□□□□ -2
ITGB1P05556 RNA5SP82-201ENST00000516707 92 ntBASIC2.57□□□□□ -2
ITGB1P05556 RNU6-1234P-201ENST00000516877 103 ntBASIC2.57□□□□□ -2
ITGB1P05556 AC025647.1-201ENST00000517879 253 ntBASIC2.57□□□□□ -2
ITGB1P05556 AC112693.2-201ENST00000556538 232 ntBASIC2.57□□□□□ -2
ITGB1P05556 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC2.57□□□□□ -2
ITGB1P05556 MIR5688-201ENST00000580619 83 ntBASIC2.57□□□□□ -2
ITGB1P05556 MIR5694-201ENST00000581190 76 ntBASIC2.57□□□□□ -2
ITGB1P05556 MIR5092-201ENST00000583139 88 ntBASIC2.57□□□□□ -2
ITGB1P05556 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.57□□□□□ -2
ITGB1P05556 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
ITGB1P05556 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.56□□□□□ -2
ITGB1P05556 RNY1P11-201ENST00000363759 113 ntBASIC2.56□□□□□ -2
ITGB1P05556 RNU1-91P-201ENST00000364746 163 ntBASIC2.56□□□□□ -2
ITGB1P05556 RNU1-52P-201ENST00000384190 164 ntBASIC2.56□□□□□ -2
ITGB1P05556 RNU6-768P-201ENST00000384683 107 ntBASIC2.56□□□□□ -2
ITGB1P05556 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.56□□□□□ -2
ITGB1P05556 RNU6-1228P-201ENST00000391014 107 ntBASIC2.56□□□□□ -2
ITGB1P05556 AC016909.1-201ENST00000415916 166 ntBASIC2.56□□□□□ -2
ITGB1P05556 RPS12P2-201ENST00000439728 269 ntBASIC2.56□□□□□ -2
ITGB1P05556 MTCO1P44-201ENST00000441935 243 ntBASIC2.56□□□□□ -2
ITGB1P05556 HSPE1P13-201ENST00000451143 297 ntBASIC2.56□□□□□ -2
ITGB1P05556 RNU7-197P-201ENST00000458836 62 ntBASIC2.56□□□□□ -2
ITGB1P05556 AC093259.1-201ENST00000509755 300 ntBASIC2.56□□□□□ -2
ITGB1P05556 AC010598.1-201ENST00000510378 103 ntBASIC2.56□□□□□ -2
ITGB1P05556 POLR3GP1-201ENST00000594073 261 ntBASIC2.56□□□□□ -2
ITGB1P05556 AL031274.2-201ENST00000599419 203 ntBASIC2.56□□□□□ -2
ITGB1P05556 AP003357.1-201ENST00000604497 148 ntBASIC2.56□□□□□ -2
ITGB1P05556 AL355297.2-201ENST00000604792 129 ntBASIC2.56□□□□□ -2
ITGB1P05556 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.56□□□□□ -2
ITGB1P05556 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.56□□□□□ -2
ITGB1P05556 MIR6895-201ENST00000613497 78 ntBASIC2.56□□□□□ -2
ITGB1P05556 MIR1291-201ENST00000627649 87 ntBASIC2.56□□□□□ -2
ITGB1P05556 AC016717.2-201ENST00000609089 5141 ntBASIC2.56□□□□□ -2
ITGB1P05556 Y_RNA.71-201ENST00000362892 104 ntBASIC2.55□□□□□ -2
ITGB1P05556 RNA5SP125-201ENST00000364843 120 ntBASIC2.55□□□□□ -2
ITGB1P05556 RNU6-728P-201ENST00000365375 104 ntBASIC2.55□□□□□ -2
ITGB1P05556 RNU6-460P-201ENST00000391158 108 ntBASIC2.55□□□□□ -2
ITGB1P05556 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.55□□□□□ -2
ITGB1P05556 Y_RNA.622-201ENST00000411091 108 ntBASIC2.55□□□□□ -2
ITGB1P05556 CYCSP49-201ENST00000420810 319 ntBASIC2.55□□□□□ -2
ITGB1P05556 AC008134.1-201ENST00000420943 193 ntBASIC2.55□□□□□ -2
ITGB1P05556 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC2.55□□□□□ -2
ITGB1P05556 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.55□□□□□ -2
ITGB1P05556 AL357134.1-201ENST00000445848 426 ntBASIC2.55□□□□□ -2
ITGB1P05556 ZNF271P-202ENST00000465539 1970 ntBASIC2.55□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 188.3 ms