Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 RN7SL594P-201ENST00000470590 287 ntBASIC3.1□□□□□ -1.91
PDGFAP04085 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC3.1□□□□□ -1.91
PDGFAP04085 SNORD33.1-201ENST00000516213 88 ntBASIC3.1□□□□□ -1.91
PDGFAP04085 AC104027.1-201ENST00000521887 300 ntBASIC3.1□□□□□ -1.91
PDGFAP04085 CYCSP26-201ENST00000534107 320 ntBASIC3.1□□□□□ -1.91
PDGFAP04085 MIR4762-201ENST00000585261 75 ntBASIC3.1□□□□□ -1.91
PDGFAP04085 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.1□□□□□ -1.91
PDGFAP04085 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
PDGFAP04085 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC3.09□□□□□ -1.91
PDGFAP04085 RNU6-1084P-201ENST00000362498 107 ntBASIC3.09□□□□□ -1.91
PDGFAP04085 RNU6-508P-201ENST00000363231 103 ntBASIC3.09□□□□□ -1.91
PDGFAP04085 RNA5SP42-201ENST00000364278 115 ntBASIC3.09□□□□□ -1.91
PDGFAP04085 U8.5-201ENST00000364528 136 ntBASIC3.09□□□□□ -1.91
PDGFAP04085 MIR548A2-201ENST00000384956 97 ntBASIC3.09□□□□□ -1.91
PDGFAP04085 RNA5SP482-201ENST00000391269 118 ntBASIC3.09□□□□□ -1.91
PDGFAP04085 Y_RNA.630-201ENST00000411370 108 ntBASIC3.09□□□□□ -1.91
PDGFAP04085 AC245047.3-201ENST00000429428 127 ntBASIC3.09□□□□□ -1.91
PDGFAP04085 AC099677.2-201ENST00000436385 175 ntBASIC3.09□□□□□ -1.91
PDGFAP04085 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.09□□□□□ -1.91
PDGFAP04085 AL021397.1-201ENST00000451806 248 ntBASIC3.09□□□□□ -1.91
PDGFAP04085 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC3.09□□□□□ -1.91
PDGFAP04085 PDCD5P2-201ENST00000507570 312 ntBASIC3.09□□□□□ -1.91
PDGFAP04085 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.09□□□□□ -1.91
PDGFAP04085 MFSD8-233ENST00000641482 4860 ntBASIC3.09□□□□□ -1.92
PDGFAP04085 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.09□□□□□ -1.92
PDGFAP04085 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
PDGFAP04085 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.08□□□□□ -1.92
PDGFAP04085 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.08□□□□□ -1.92
PDGFAP04085 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.08□□□□□ -1.92
PDGFAP04085 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.08□□□□□ -1.92
PDGFAP04085 SNORD115-3-201ENST00000363100 82 ntBASIC3.08□□□□□ -1.92
PDGFAP04085 SNORD56.3-201ENST00000363507 71 ntBASIC3.08□□□□□ -1.92
PDGFAP04085 snoU2-30.1-201ENST00000365012 70 ntBASIC3.08□□□□□ -1.92
PDGFAP04085 Y_RNA.346-201ENST00000365385 112 ntBASIC3.08□□□□□ -1.92
PDGFAP04085 MIR548A3-201ENST00000385297 97 ntBASIC3.08□□□□□ -1.92
PDGFAP04085 HMGN1P18-201ENST00000457642 277 ntBASIC3.08□□□□□ -1.92
PDGFAP04085 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.08□□□□□ -1.92
PDGFAP04085 RN7SKP19-201ENST00000516016 252 ntBASIC3.08□□□□□ -1.92
PDGFAP04085 RNU7-28P-201ENST00000516759 62 ntBASIC3.08□□□□□ -1.92
PDGFAP04085 AC245166.1-201ENST00000521012 253 ntBASIC3.08□□□□□ -1.92
PDGFAP04085 AC005786.1-201ENST00000588553 154 ntBASIC3.08□□□□□ -1.92
PDGFAP04085 AC108081.1-201ENST00000604358 221 ntBASIC3.08□□□□□ -1.92
PDGFAP04085 AP006437.1-201ENST00000641440 3685 ntBASIC3.08□□□□□ -1.92
PDGFAP04085 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
PDGFAP04085 MIR422A-201ENST00000362286 90 ntBASIC3.07□□□□□ -1.92
PDGFAP04085 Y_RNA.265-201ENST00000364677 108 ntBASIC3.07□□□□□ -1.92
PDGFAP04085 MIR518F-201ENST00000384973 87 ntBASIC3.07□□□□□ -1.92
PDGFAP04085 SNORD77.3-201ENST00000391113 65 ntBASIC3.07□□□□□ -1.92
PDGFAP04085 Y_RNA.651-201ENST00000459380 103 ntBASIC3.07□□□□□ -1.92
PDGFAP04085 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.07□□□□□ -1.92
PDGFAP04085 RNA5SP236-201ENST00000516169 116 ntBASIC3.07□□□□□ -1.92
PDGFAP04085 RNU6-589P-201ENST00000516485 107 ntBASIC3.07□□□□□ -1.92
PDGFAP04085 RNU6-113P-201ENST00000516653 101 ntBASIC3.07□□□□□ -1.92
PDGFAP04085 AL121890.5-201ENST00000620848 304 ntBASIC3.07□□□□□ -1.92
PDGFAP04085 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.07□□□□□ -1.92
PDGFAP04085 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC3.07□□□□□ -1.92
PDGFAP04085 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.07□□□□□ -1.92
PDGFAP04085 RNU1-58P-201ENST00000362413 163 ntBASIC3.06□□□□□ -1.92
PDGFAP04085 SNORA63.4-201ENST00000362763 126 ntBASIC3.06□□□□□ -1.92
PDGFAP04085 SNORA44-201ENST00000384584 132 ntBASIC3.06□□□□□ -1.92
PDGFAP04085 MIR548O-201ENST00000408583 114 ntBASIC3.06□□□□□ -1.92
PDGFAP04085 RNU6-781P-201ENST00000516377 101 ntBASIC3.06□□□□□ -1.92
PDGFAP04085 SNORA70.19-201ENST00000516717 90 ntBASIC3.06□□□□□ -1.92
PDGFAP04085 RNU6-1149P-201ENST00000516810 97 ntBASIC3.06□□□□□ -1.92
PDGFAP04085 SNORA31.26-201ENST00000517250 137 ntBASIC3.06□□□□□ -1.92
PDGFAP04085 MIR3126-201ENST00000577443 74 ntBASIC3.06□□□□□ -1.92
PDGFAP04085 MIR3124-201ENST00000582636 67 ntBASIC3.06□□□□□ -1.92
PDGFAP04085 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC3.06□□□□□ -1.92
PDGFAP04085 AC006441.5-201ENST00000612680 209 ntBASIC3.06□□□□□ -1.92
PDGFAP04085 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC3.06□□□□□ -1.92
PDGFAP04085 AC134878.1-201ENST00000619901 243 ntBASIC3.06□□□□□ -1.92
PDGFAP04085 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
PDGFAP04085 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
PDGFAP04085 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.05□□□□□ -1.92
PDGFAP04085 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC3.05□□□□□ -1.92
PDGFAP04085 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
PDGFAP04085 RNU1-91P-201ENST00000364746 163 ntBASIC3.05□□□□□ -1.92
PDGFAP04085 RPL21P3-201ENST00000395517 478 ntBASIC3.05□□□□□ -1.92
PDGFAP04085 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.05□□□□□ -1.92
PDGFAP04085 RNU4-47P-201ENST00000410876 114 ntBASIC3.05□□□□□ -1.92
PDGFAP04085 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC3.05□□□□□ -1.92
PDGFAP04085 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC3.05□□□□□ -1.92
PDGFAP04085 AC069114.2-201ENST00000604699 304 ntBASIC3.05□□□□□ -1.92
PDGFAP04085 AC025166.1-201ENST00000612411 163 ntBASIC3.05□□□□□ -1.92
PDGFAP04085 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.05□□□□□ -1.92
PDGFAP04085 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
PDGFAP04085 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.04□□□□□ -1.92
PDGFAP04085 Y_RNA.336-201ENST00000365307 109 ntBASIC3.04□□□□□ -1.92
PDGFAP04085 Y_RNA.410-201ENST00000383992 113 ntBASIC3.04□□□□□ -1.92
PDGFAP04085 SNORD116-21-201ENST00000384507 92 ntBASIC3.04□□□□□ -1.92
PDGFAP04085 MIRLET7F2-201ENST00000385277 83 ntBASIC3.04□□□□□ -1.92
PDGFAP04085 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC3.04□□□□□ -1.92
PDGFAP04085 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.04□□□□□ -1.92
PDGFAP04085 AC107083.1-201ENST00000439643 279 ntBASIC3.04□□□□□ -1.92
PDGFAP04085 UBBP3-201ENST00000445497 241 ntBASIC3.04□□□□□ -1.92
PDGFAP04085 RNU7-26P-201ENST00000458980 63 ntBASIC3.04□□□□□ -1.92
PDGFAP04085 AC021205.2-201ENST00000480069 347 ntBASIC3.04□□□□□ -1.92
PDGFAP04085 AC026333.2-201ENST00000542164 106 ntBASIC3.04□□□□□ -1.92
PDGFAP04085 MIR5197-201ENST00000583721 112 ntBASIC3.04□□□□□ -1.92
PDGFAP04085 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.04□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms