Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 MTND1P17-201ENST00000448961 204 ntBASIC0.44□□□□□ -2.34
COL4A1P02462 HMGN2P26-201ENST00000463169 339 ntBASIC0.44□□□□□ -2.34
COL4A1P02462 OR9P1P-201ENST00000496431 281 ntBASIC0.44□□□□□ -2.34
COL4A1P02462 AC011352.1-201ENST00000512300 793 ntBASIC0.44□□□□□ -2.34
COL4A1P02462 SNORD79.1-201ENST00000516069 84 ntBASIC0.44□□□□□ -2.34
COL4A1P02462 RNU6-1278P-201ENST00000516130 107 ntBASIC0.44□□□□□ -2.34
COL4A1P02462 RNU6-718P-201ENST00000516166 105 ntBASIC0.44□□□□□ -2.34
COL4A1P02462 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC0.44□□□□□ -2.34
COL4A1P02462 AC040896.1-201ENST00000613819 479 ntBASIC0.44□□□□□ -2.34
COL4A1P02462 AC104260.1-201ENST00000616660 539 ntBASIC0.44□□□□□ -2.34
COL4A1P02462 uc_338.22-201ENST00000622722 187 ntBASIC0.44□□□□□ -2.34
COL4A1P02462 AC005592.1-201ENST00000566527 1640 ntBASIC0.44□□□□□ -2.34
COL4A1P02462 SNORA1B-201ENST00000362535 133 ntBASIC0.43□□□□□ -2.34
COL4A1P02462 RNU6-961P-201ENST00000363893 105 ntBASIC0.43□□□□□ -2.34
COL4A1P02462 RNA5SP368-201ENST00000364298 116 ntBASIC0.43□□□□□ -2.34
COL4A1P02462 RNU4-76P-201ENST00000364509 141 ntBASIC0.43□□□□□ -2.34
COL4A1P02462 SNORA2.2-201ENST00000365473 135 ntBASIC0.43□□□□□ -2.34
COL4A1P02462 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC0.43□□□□□ -2.34
COL4A1P02462 RNU6-318P-201ENST00000384283 103 ntBASIC0.43□□□□□ -2.34
COL4A1P02462 RNU6-505P-201ENST00000384427 107 ntBASIC0.43□□□□□ -2.34
COL4A1P02462 SNORD116-4-201ENST00000384733 96 ntBASIC0.43□□□□□ -2.34
COL4A1P02462 MIR548F1-201ENST00000408667 84 ntBASIC0.43□□□□□ -2.34
COL4A1P02462 MTCO3P19-201ENST00000415864 321 ntBASIC0.43□□□□□ -2.34
COL4A1P02462 AL589823.1-201ENST00000429577 183 ntBASIC0.43□□□□□ -2.34
COL4A1P02462 AC091179.3-201ENST00000474761 144 ntBASIC0.43□□□□□ -2.34
COL4A1P02462 RNU6-1114P-201ENST00000516022 107 ntBASIC0.43□□□□□ -2.34
COL4A1P02462 ACA64.5-201ENST00000516207 127 ntBASIC0.43□□□□□ -2.34
COL4A1P02462 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC0.43□□□□□ -2.34
COL4A1P02462 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC0.43□□□□□ -2.34
COL4A1P02462 AC100812.1-201ENST00000607622 580 ntBASIC0.43□□□□□ -2.34
COL4A1P02462 AL357075.2-201ENST00000614906 189 ntBASIC0.43□□□□□ -2.34
COL4A1P02462 PISRT1.1-201ENST00000616930 107 ntBASIC0.43□□□□□ -2.34
COL4A1P02462 AC027279.3-201ENST00000625055 122 ntBASIC0.43□□□□□ -2.34
COL4A1P02462 RNU6-1301P-201ENST00000362724 104 ntBASIC0.43□□□□□ -2.34
COL4A1P02462 RNU6-626P-201ENST00000363354 107 ntBASIC0.43□□□□□ -2.34
COL4A1P02462 RNU6-1059P-201ENST00000363752 98 ntBASIC0.43□□□□□ -2.34
COL4A1P02462 RNU4-40P-201ENST00000364351 143 ntBASIC0.43□□□□□ -2.34
COL4A1P02462 SNORD114-15-201ENST00000364687 72 ntBASIC0.43□□□□□ -2.34
COL4A1P02462 SNORA50A-201ENST00000384225 134 ntBASIC0.43□□□□□ -2.34
COL4A1P02462 RNU6-376P-201ENST00000384731 106 ntBASIC0.43□□□□□ -2.34
COL4A1P02462 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.43□□□□□ -2.34
COL4A1P02462 SNORA69.1-201ENST00000390904 137 ntBASIC0.43□□□□□ -2.34
COL4A1P02462 AL451046.2-201ENST00000403074 277 ntBASIC0.43□□□□□ -2.34
COL4A1P02462 Y_RNA.594-201ENST00000410373 140 ntBASIC0.43□□□□□ -2.34
COL4A1P02462 AC009161.1-201ENST00000417306 376 ntBASIC0.43□□□□□ -2.34
COL4A1P02462 USP9YP16-201ENST00000430287 407 ntBASIC0.43□□□□□ -2.34
COL4A1P02462 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC0.43□□□□□ -2.34
COL4A1P02462 USP9YP23-201ENST00000455085 407 ntBASIC0.43□□□□□ -2.34
COL4A1P02462 RPL39P39-201ENST00000455840 151 ntBASIC0.43□□□□□ -2.34
COL4A1P02462 AC105758.1-201ENST00000506038 399 ntBASIC0.43□□□□□ -2.34
COL4A1P02462 RNU6-408P-201ENST00000515910 100 ntBASIC0.43□□□□□ -2.34
COL4A1P02462 SNORA31.2-201ENST00000516019 134 ntBASIC0.43□□□□□ -2.34
COL4A1P02462 RNU6-358P-201ENST00000516564 75 ntBASIC0.43□□□□□ -2.34
COL4A1P02462 AC012557.2-201ENST00000605919 418 ntBASIC0.43□□□□□ -2.34
COL4A1P02462 AC127459.3-201ENST00000624328 466 ntBASIC0.43□□□□□ -2.34
COL4A1P02462 AC008873.1-201ENST00000625051 138 ntBASIC0.43□□□□□ -2.34
COL4A1P02462 AC068647.2-201ENST00000637380 353 ntBASIC0.43□□□□□ -2.34
COL4A1P02462 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.42□□□□□ -2.34
COL4A1P02462 RNU6-593P-201ENST00000364716 112 ntBASIC0.42□□□□□ -2.34
COL4A1P02462 Y_RNA.516-201ENST00000384541 124 ntBASIC0.42□□□□□ -2.34
COL4A1P02462 FCF1P9-201ENST00000412546 282 ntBASIC0.42□□□□□ -2.34
COL4A1P02462 AL354751.2-201ENST00000415471 210 ntBASIC0.42□□□□□ -2.34
COL4A1P02462 PIGPP3-201ENST00000425307 415 ntBASIC0.42□□□□□ -2.34
COL4A1P02462 RPS3AP52-201ENST00000435639 297 ntBASIC0.42□□□□□ -2.34
COL4A1P02462 AC002429.1-201ENST00000437672 148 ntBASIC0.42□□□□□ -2.34
COL4A1P02462 MTND3P10-201ENST00000450967 341 ntBASIC0.42□□□□□ -2.34
COL4A1P02462 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC0.42□□□□□ -2.34
COL4A1P02462 snoU13.25-201ENST00000458945 104 ntBASIC0.42□□□□□ -2.34
COL4A1P02462 RNU7-90P-201ENST00000459216 62 ntBASIC0.42□□□□□ -2.34
COL4A1P02462 MIR2053-201ENST00000459295 91 ntBASIC0.42□□□□□ -2.34
COL4A1P02462 AC104692.1-201ENST00000472406 90 ntBASIC0.42□□□□□ -2.34
COL4A1P02462 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC0.42□□□□□ -2.34
COL4A1P02462 PSMC1P5-201ENST00000512850 177 ntBASIC0.42□□□□□ -2.34
COL4A1P02462 RNU6-436P-201ENST00000516171 114 ntBASIC0.42□□□□□ -2.34
COL4A1P02462 RNU6-922P-201ENST00000516753 99 ntBASIC0.42□□□□□ -2.34
COL4A1P02462 MIR3192-201ENST00000584920 77 ntBASIC0.42□□□□□ -2.34
COL4A1P02462 AL117336.2-201ENST00000602435 335 ntBASIC0.42□□□□□ -2.34
COL4A1P02462 AL357312.1-201ENST00000603879 298 ntBASIC0.42□□□□□ -2.34
COL4A1P02462 AC005828.6-201ENST00000606610 232 ntBASIC0.42□□□□□ -2.34
COL4A1P02462 AC093783.1-201ENST00000612976 329 ntBASIC0.42□□□□□ -2.34
COL4A1P02462 MIR3688-2-201ENST00000636963 87 ntBASIC0.42□□□□□ -2.34
COL4A1P02462 RNU6-879P-201ENST00000364328 108 ntBASIC0.41□□□□□ -2.34
COL4A1P02462 SNORD114-24-201ENST00000365029 72 ntBASIC0.41□□□□□ -2.34
COL4A1P02462 RNY4P3-201ENST00000365254 95 ntBASIC0.41□□□□□ -2.34
COL4A1P02462 Y_RNA.482-201ENST00000384377 111 ntBASIC0.41□□□□□ -2.34
COL4A1P02462 SNORA80D-201ENST00000384488 135 ntBASIC0.41□□□□□ -2.34
COL4A1P02462 MIR100-201ENST00000385259 80 ntBASIC0.41□□□□□ -2.34
COL4A1P02462 SNORA12.1-201ENST00000390873 148 ntBASIC0.41□□□□□ -2.34
COL4A1P02462 MIR548K-201ENST00000408406 116 ntBASIC0.41□□□□□ -2.34
COL4A1P02462 SNORD12B-201ENST00000410433 91 ntBASIC0.41□□□□□ -2.34
COL4A1P02462 AL139396.1-201ENST00000421137 167 ntBASIC0.41□□□□□ -2.34
COL4A1P02462 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC0.41□□□□□ -2.34
COL4A1P02462 AC233266.1-201ENST00000454518 96 ntBASIC0.41□□□□□ -2.34
COL4A1P02462 RPL7P42-201ENST00000481005 679 ntBASIC0.41□□□□□ -2.34
COL4A1P02462 AC069439.1-201ENST00000494739 167 ntBASIC0.41□□□□□ -2.34
COL4A1P02462 MTND5P5-201ENST00000503764 376 ntBASIC0.41□□□□□ -2.34
COL4A1P02462 RNU4ATAC7P-201ENST00000516280 125 ntBASIC0.41□□□□□ -2.34
COL4A1P02462 RNU6-917P-201ENST00000516294 104 ntBASIC0.41□□□□□ -2.34
COL4A1P02462 RNU6-1291P-201ENST00000516591 104 ntBASIC0.41□□□□□ -2.34
COL4A1P02462 RNU6-63P-201ENST00000516690 95 ntBASIC0.41□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms