Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 AP002004.2-201ENST00000531656 154 ntBASIC1.53□□□□□ -2.16
SSX4O60224 AP003072.1-201ENST00000531740 145 ntBASIC1.53□□□□□ -2.16
SSX4O60224 MIR4498-201ENST00000577599 66 ntBASIC1.53□□□□□ -2.16
SSX4O60224 AL355297.3-201ENST00000604082 446 ntBASIC1.53□□□□□ -2.16
SSX4O60224 AC004832.4-201ENST00000608952 331 ntBASIC1.53□□□□□ -2.16
SSX4O60224 MIR8063-201ENST00000621930 81 ntBASIC1.53□□□□□ -2.16
SSX4O60224 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
SSX4O60224 MIR126-201ENST00000362291 85 ntBASIC1.52□□□□□ -2.17
SSX4O60224 RNU4-13P-201ENST00000364019 141 ntBASIC1.52□□□□□ -2.17
SSX4O60224 RNU6-694P-201ENST00000364071 147 ntBASIC1.52□□□□□ -2.17
SSX4O60224 Y_RNA.210-201ENST00000364161 110 ntBASIC1.52□□□□□ -2.17
SSX4O60224 Y_RNA.383-201ENST00000383855 97 ntBASIC1.52□□□□□ -2.17
SSX4O60224 RNU6-855P-201ENST00000410395 104 ntBASIC1.52□□□□□ -2.17
SSX4O60224 RNU6-121P-201ENST00000410525 99 ntBASIC1.52□□□□□ -2.17
SSX4O60224 Y_RNA.602-201ENST00000410535 92 ntBASIC1.52□□□□□ -2.17
SSX4O60224 RNA5SP247-201ENST00000411181 105 ntBASIC1.52□□□□□ -2.17
SSX4O60224 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.52□□□□□ -2.17
SSX4O60224 RPS4XP11-201ENST00000446897 772 ntBASIC1.52□□□□□ -2.17
SSX4O60224 RPS20P10-201ENST00000451209 253 ntBASIC1.52□□□□□ -2.17
SSX4O60224 RNU1-98P-201ENST00000458992 160 ntBASIC1.52□□□□□ -2.17
SSX4O60224 RPS29P11-201ENST00000496507 171 ntBASIC1.52□□□□□ -2.17
SSX4O60224 AC107393.1-201ENST00000512403 346 ntBASIC1.52□□□□□ -2.17
SSX4O60224 RNU6-970P-201ENST00000516312 107 ntBASIC1.52□□□□□ -2.17
SSX4O60224 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.52□□□□□ -2.17
SSX4O60224 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC1.52□□□□□ -2.17
SSX4O60224 AL162424.1-201ENST00000602325 221 ntBASIC1.52□□□□□ -2.17
SSX4O60224 SNORA28-201ENST00000606769 126 ntBASIC1.52□□□□□ -2.17
SSX4O60224 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
SSX4O60224 Y_RNA.153-201ENST00000363615 91 ntBASIC1.51□□□□□ -2.17
SSX4O60224 Y_RNA.214-201ENST00000364201 112 ntBASIC1.51□□□□□ -2.17
SSX4O60224 RNU6-102P-201ENST00000384485 104 ntBASIC1.51□□□□□ -2.17
SSX4O60224 RNU6-985P-201ENST00000410182 104 ntBASIC1.51□□□□□ -2.17
SSX4O60224 POLR2KP2-201ENST00000438155 177 ntBASIC1.51□□□□□ -2.17
SSX4O60224 RNU6-250P-201ENST00000516958 103 ntBASIC1.51□□□□□ -2.17
SSX4O60224 MIR3618-201ENST00000580330 88 ntBASIC1.51□□□□□ -2.17
SSX4O60224 MIR3683-201ENST00000580847 82 ntBASIC1.51□□□□□ -2.17
SSX4O60224 MIR502-201ENST00000606349 86 ntBASIC1.51□□□□□ -2.17
SSX4O60224 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.51□□□□□ -2.17
SSX4O60224 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.5□□□□□ -2.17
SSX4O60224 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
SSX4O60224 MIR302D-201ENST00000362275 68 ntBASIC1.5□□□□□ -2.17
SSX4O60224 RNU6-1123P-201ENST00000362347 106 ntBASIC1.5□□□□□ -2.17
SSX4O60224 RNU6-770P-201ENST00000363929 105 ntBASIC1.5□□□□□ -2.17
SSX4O60224 Y_RNA.341-201ENST00000365341 102 ntBASIC1.5□□□□□ -2.17
SSX4O60224 AL590004.1-201ENST00000405321 300 ntBASIC1.5□□□□□ -2.17
SSX4O60224 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.5□□□□□ -2.17
SSX4O60224 AC024067.1-201ENST00000426199 223 ntBASIC1.5□□□□□ -2.17
SSX4O60224 PGBD4P5-201ENST00000445958 426 ntBASIC1.5□□□□□ -2.17
SSX4O60224 HSPE1P25-201ENST00000455484 251 ntBASIC1.5□□□□□ -2.17
SSX4O60224 AL049830.1-201ENST00000468034 425 ntBASIC1.5□□□□□ -2.17
SSX4O60224 HMGN1P10-201ENST00000474557 553 ntBASIC1.5□□□□□ -2.17
SSX4O60224 RNU6-496P-201ENST00000516145 99 ntBASIC1.5□□□□□ -2.17
SSX4O60224 RNY3P15-201ENST00000516297 97 ntBASIC1.5□□□□□ -2.17
SSX4O60224 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.5□□□□□ -2.17
SSX4O60224 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.5□□□□□ -2.17
SSX4O60224 AL358944.1-201ENST00000528537 144 ntBASIC1.5□□□□□ -2.17
SSX4O60224 AC015688.6-201ENST00000577737 104 ntBASIC1.5□□□□□ -2.17
SSX4O60224 AC005972.2-201ENST00000604690 348 ntBASIC1.5□□□□□ -2.17
SSX4O60224 AC073349.3-201ENST00000617616 186 ntBASIC1.5□□□□□ -2.17
SSX4O60224 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.5□□□□□ -2.17
SSX4O60224 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
SSX4O60224 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.49□□□□□ -2.17
SSX4O60224 Y_RNA.19-201ENST00000362462 99 ntBASIC1.49□□□□□ -2.17
SSX4O60224 Y_RNA.152-201ENST00000363578 100 ntBASIC1.49□□□□□ -2.17
SSX4O60224 Y_RNA.222-201ENST00000364264 102 ntBASIC1.49□□□□□ -2.17
SSX4O60224 SNORD1A-201ENST00000364968 72 ntBASIC1.49□□□□□ -2.17
SSX4O60224 Y_RNA.310-201ENST00000365063 113 ntBASIC1.49□□□□□ -2.17
SSX4O60224 RNU6-806P-201ENST00000365147 105 ntBASIC1.49□□□□□ -2.17
SSX4O60224 Y_RNA.326-201ENST00000365176 113 ntBASIC1.49□□□□□ -2.17
SSX4O60224 Y_RNA.368-201ENST00000365547 113 ntBASIC1.49□□□□□ -2.17
SSX4O60224 MIR513A1-201ENST00000385138 129 ntBASIC1.49□□□□□ -2.17
SSX4O60224 Y_RNA.621-201ENST00000411065 96 ntBASIC1.49□□□□□ -2.17
SSX4O60224 BTF3P4-201ENST00000418852 495 ntBASIC1.49□□□□□ -2.17
SSX4O60224 LINC01399-202ENST00000458450 244 ntBASIC1.49□□□□□ -2.17
SSX4O60224 OR9P1P-201ENST00000496431 281 ntBASIC1.49□□□□□ -2.17
SSX4O60224 RNU7-28P-201ENST00000516759 62 ntBASIC1.49□□□□□ -2.17
SSX4O60224 AC011604.1-201ENST00000545978 196 ntBASIC1.49□□□□□ -2.17
SSX4O60224 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.49□□□□□ -2.17
SSX4O60224 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.49□□□□□ -2.17
SSX4O60224 snoU13.31-201ENST00000607291 104 ntBASIC1.49□□□□□ -2.17
SSX4O60224 Y_RNA.26-201ENST00000362539 101 ntBASIC1.48□□□□□ -2.17
SSX4O60224 RNU4-90P-201ENST00000362773 141 ntBASIC1.48□□□□□ -2.17
SSX4O60224 RNU4-80P-201ENST00000363200 141 ntBASIC1.48□□□□□ -2.17
SSX4O60224 Y_RNA.276-201ENST00000364732 109 ntBASIC1.48□□□□□ -2.17
SSX4O60224 RNU6-1080P-201ENST00000383982 107 ntBASIC1.48□□□□□ -2.17
SSX4O60224 Y_RNA.456-201ENST00000384232 111 ntBASIC1.48□□□□□ -2.17
SSX4O60224 RNA5SP482-201ENST00000391269 118 ntBASIC1.48□□□□□ -2.17
SSX4O60224 AC113618.1-201ENST00000416747 285 ntBASIC1.48□□□□□ -2.17
SSX4O60224 CALM2P4-201ENST00000430810 426 ntBASIC1.48□□□□□ -2.17
SSX4O60224 AL135790.2-201ENST00000437701 267 ntBASIC1.48□□□□□ -2.17
SSX4O60224 AC098869.1-201ENST00000481627 292 ntBASIC1.48□□□□□ -2.17
SSX4O60224 MRPS35P2-201ENST00000508242 191 ntBASIC1.48□□□□□ -2.17
SSX4O60224 SUMO2P16-201ENST00000519475 264 ntBASIC1.48□□□□□ -2.17
SSX4O60224 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
SSX4O60224 AL513423.1-201ENST00000621695 132 ntBASIC1.48□□□□□ -2.17
SSX4O60224 AC068647.2-201ENST00000637380 353 ntBASIC1.48□□□□□ -2.17
SSX4O60224 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.48□□□□□ -2.17
SSX4O60224 SNORA63-201ENST00000363450 132 ntBASIC1.47□□□□□ -2.17
SSX4O60224 RNU4-41P-201ENST00000364426 143 ntBASIC1.47□□□□□ -2.17
SSX4O60224 RNA5SP259-201ENST00000365541 109 ntBASIC1.47□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 266.4 ms