Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 AP003484.1-201ENST00000530974 250 ntBASIC3.77□□□□□ -1.81
HOXA2O43364 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC3.77□□□□□ -1.81
HOXA2O43364 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.77□□□□□ -1.81
HOXA2O43364 MIR3683-201ENST00000580847 82 ntBASIC3.77□□□□□ -1.81
HOXA2O43364 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC3.77□□□□□ -1.81
HOXA2O43364 MIR1245B-201ENST00000636115 69 ntBASIC3.77□□□□□ -1.81
HOXA2O43364 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
HOXA2O43364 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
HOXA2O43364 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
HOXA2O43364 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
HOXA2O43364 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
HOXA2O43364 AC008264.2-201ENST00000610193 3731 ntBASIC3.76□□□□□ -1.81
HOXA2O43364 Y_RNA.99-201ENST00000363138 105 ntBASIC3.76□□□□□ -1.81
HOXA2O43364 SNORD21-201ENST00000383953 95 ntBASIC3.76□□□□□ -1.81
HOXA2O43364 RPL21P3-201ENST00000395517 478 ntBASIC3.76□□□□□ -1.81
HOXA2O43364 ATP6V0E1P1-201ENST00000412537 226 ntBASIC3.76□□□□□ -1.81
HOXA2O43364 SNRPGP14-201ENST00000435400 219 ntBASIC3.76□□□□□ -1.81
HOXA2O43364 AC009238.1-201ENST00000442165 424 ntBASIC3.76□□□□□ -1.81
HOXA2O43364 AC009237.6-201ENST00000446969 424 ntBASIC3.76□□□□□ -1.81
HOXA2O43364 SNORD45.4-201ENST00000516629 73 ntBASIC3.76□□□□□ -1.81
HOXA2O43364 AC022523.2-201ENST00000561045 150 ntBASIC3.76□□□□□ -1.81
HOXA2O43364 YPEL5P2-201ENST00000605553 359 ntBASIC3.76□□□□□ -1.81
HOXA2O43364 CTSLP2-204ENST00000629029 392 ntBASIC3.76□□□□□ -1.81
HOXA2O43364 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.76□□□□□ -1.81
HOXA2O43364 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.76□□□□□ -1.81
HOXA2O43364 Z83843.1-201ENST00000604070 3685 ntBASIC3.76□□□□□ -1.81
HOXA2O43364 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC3.75□□□□□ -1.81
HOXA2O43364 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
HOXA2O43364 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
HOXA2O43364 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
HOXA2O43364 RNU6-1134P-201ENST00000365156 101 ntBASIC3.75□□□□□ -1.81
HOXA2O43364 RNU6-1104P-201ENST00000384723 104 ntBASIC3.75□□□□□ -1.81
HOXA2O43364 MIR634-201ENST00000385208 97 ntBASIC3.75□□□□□ -1.81
HOXA2O43364 Z98941.1-201ENST00000407764 100 ntBASIC3.75□□□□□ -1.81
HOXA2O43364 CST2P1-201ENST00000425770 87 ntBASIC3.75□□□□□ -1.81
HOXA2O43364 AC006989.1-201ENST00000427212 131 ntBASIC3.75□□□□□ -1.81
HOXA2O43364 AC006539.3-201ENST00000454258 129 ntBASIC3.75□□□□□ -1.81
HOXA2O43364 IGKV2-26-201ENST00000518305 343 ntBASIC3.75□□□□□ -1.81
HOXA2O43364 AC015726.2-201ENST00000620112 122 ntBASIC3.75□□□□□ -1.81
HOXA2O43364 MIR8057-201ENST00000620957 69 ntBASIC3.75□□□□□ -1.81
HOXA2O43364 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.75□□□□□ -1.81
HOXA2O43364 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.75□□□□□ -1.81
HOXA2O43364 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
HOXA2O43364 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.74□□□□□ -1.81
HOXA2O43364 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
HOXA2O43364 AL356274.2-201ENST00000624379 3752 ntBASIC3.74□□□□□ -1.81
HOXA2O43364 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.74□□□□□ -1.81
HOXA2O43364 RNU6-816P-201ENST00000390914 107 ntBASIC3.74□□□□□ -1.81
HOXA2O43364 RNU6-1268P-201ENST00000391214 107 ntBASIC3.74□□□□□ -1.81
HOXA2O43364 RNU6-1239P-201ENST00000391310 107 ntBASIC3.74□□□□□ -1.81
HOXA2O43364 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC3.74□□□□□ -1.81
HOXA2O43364 RPS29P31-201ENST00000446147 164 ntBASIC3.74□□□□□ -1.81
HOXA2O43364 DEFB131E-201ENST00000532329 154 ntBASIC3.74□□□□□ -1.81
HOXA2O43364 AC091932.4-201ENST00000623386 200 ntBASIC3.74□□□□□ -1.81
HOXA2O43364 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.74□□□□□ -1.81
HOXA2O43364 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
HOXA2O43364 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC3.74□□□□□ -1.81
HOXA2O43364 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.73□□□□□ -1.81
HOXA2O43364 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
HOXA2O43364 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.73□□□□□ -1.81
HOXA2O43364 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
HOXA2O43364 Y_RNA.342-201ENST00000365352 113 ntBASIC3.73□□□□□ -1.81
HOXA2O43364 RNU6-160P-201ENST00000384591 107 ntBASIC3.73□□□□□ -1.81
HOXA2O43364 SNORA80E-201ENST00000384744 137 ntBASIC3.73□□□□□ -1.81
HOXA2O43364 AL627390.1-201ENST00000396055 340 ntBASIC3.73□□□□□ -1.81
HOXA2O43364 RNA5SP39-201ENST00000411245 120 ntBASIC3.73□□□□□ -1.81
HOXA2O43364 AL163195.1-201ENST00000496941 348 ntBASIC3.73□□□□□ -1.81
HOXA2O43364 RNU6ATAC12P-201ENST00000516542 115 ntBASIC3.73□□□□□ -1.81
HOXA2O43364 SCARNA13-201ENST00000516672 275 ntBASIC3.73□□□□□ -1.81
HOXA2O43364 AC007536.1-201ENST00000533382 349 ntBASIC3.73□□□□□ -1.81
HOXA2O43364 MIR4276-201ENST00000584832 70 ntBASIC3.73□□□□□ -1.81
HOXA2O43364 AC020914.4-201ENST00000597690 277 ntBASIC3.73□□□□□ -1.81
HOXA2O43364 MIR7112-201ENST00000616126 65 ntBASIC3.73□□□□□ -1.81
HOXA2O43364 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
HOXA2O43364 FAM35CP-201ENST00000554755 2470 ntBASIC3.72□□□□□ -1.81
HOXA2O43364 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.72□□□□□ -1.81
HOXA2O43364 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.72□□□□□ -1.81
HOXA2O43364 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
HOXA2O43364 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
HOXA2O43364 RNA5SP482-201ENST00000391269 118 ntBASIC3.72□□□□□ -1.81
HOXA2O43364 RNU6-938P-201ENST00000411285 103 ntBASIC3.72□□□□□ -1.81
HOXA2O43364 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.72□□□□□ -1.81
HOXA2O43364 PGBD4P5-201ENST00000445958 426 ntBASIC3.72□□□□□ -1.81
HOXA2O43364 AL109933.2-201ENST00000452651 260 ntBASIC3.72□□□□□ -1.81
HOXA2O43364 SCARNA23-201ENST00000516060 130 ntBASIC3.72□□□□□ -1.81
HOXA2O43364 RNU6ATAC17P-201ENST00000516074 71 ntBASIC3.72□□□□□ -1.81
HOXA2O43364 RNU7-6P-201ENST00000516845 62 ntBASIC3.72□□□□□ -1.81
HOXA2O43364 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.71□□□□□ -1.81
HOXA2O43364 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.71□□□□□ -1.81
HOXA2O43364 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
HOXA2O43364 RNY3P2-201ENST00000362918 102 ntBASIC3.71□□□□□ -1.82
HOXA2O43364 RNA5SP322-201ENST00000363617 119 ntBASIC3.71□□□□□ -1.82
HOXA2O43364 TRBV12-1-201ENST00000479785 344 ntBASIC3.71□□□□□ -1.82
HOXA2O43364 RNU2-35P-201ENST00000516446 142 ntBASIC3.71□□□□□ -1.82
HOXA2O43364 AC026421.1-201ENST00000519101 163 ntBASIC3.71□□□□□ -1.82
HOXA2O43364 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
HOXA2O43364 MIR5680-201ENST00000577577 84 ntBASIC3.71□□□□□ -1.82
HOXA2O43364 AL590808.1-201ENST00000618696 141 ntBASIC3.71□□□□□ -1.82
HOXA2O43364 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
HOXA2O43364 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms