Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 RNU6-855P-201ENST00000410395 104 ntBASIC2.23□□□□□ -2.05
FOXN3O00409 Z98742.3-201ENST00000418637 326 ntBASIC2.23□□□□□ -2.05
FOXN3O00409 EBAG9P1-201ENST00000418955 543 ntBASIC2.23□□□□□ -2.05
FOXN3O00409 AL021397.1-201ENST00000451806 248 ntBASIC2.23□□□□□ -2.05
FOXN3O00409 U8.19-201ENST00000459095 133 ntBASIC2.23□□□□□ -2.05
FOXN3O00409 RPS26P55-201ENST00000471178 356 ntBASIC2.23□□□□□ -2.05
FOXN3O00409 RPS29P21-201ENST00000496272 170 ntBASIC2.23□□□□□ -2.05
FOXN3O00409 AL163195.1-201ENST00000496941 348 ntBASIC2.23□□□□□ -2.05
FOXN3O00409 AC084364.2-201ENST00000546924 395 ntBASIC2.23□□□□□ -2.05
FOXN3O00409 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.22□□□□□ -2.05
FOXN3O00409 RNU6-774P-201ENST00000363238 107 ntBASIC2.22□□□□□ -2.05
FOXN3O00409 RNU6-1020P-201ENST00000363684 107 ntBASIC2.22□□□□□ -2.05
FOXN3O00409 RNU4-10P-201ENST00000364383 140 ntBASIC2.22□□□□□ -2.05
FOXN3O00409 RNU4-70P-201ENST00000384579 139 ntBASIC2.22□□□□□ -2.05
FOXN3O00409 SNORA64-201ENST00000384674 134 ntBASIC2.22□□□□□ -2.05
FOXN3O00409 PCNPP3-201ENST00000393579 471 ntBASIC2.22□□□□□ -2.05
FOXN3O00409 RNU2-40P-201ENST00000410833 196 ntBASIC2.22□□□□□ -2.05
FOXN3O00409 HMGN2P19-201ENST00000425149 265 ntBASIC2.22□□□□□ -2.05
FOXN3O00409 AL356320.1-201ENST00000429616 163 ntBASIC2.22□□□□□ -2.05
FOXN3O00409 SNORD2.1-201ENST00000458762 69 ntBASIC2.22□□□□□ -2.05
FOXN3O00409 AC097462.1-201ENST00000514125 324 ntBASIC2.22□□□□□ -2.05
FOXN3O00409 Y_RNA.700-201ENST00000516806 100 ntBASIC2.22□□□□□ -2.05
FOXN3O00409 IGKV3-31-201ENST00000523109 329 ntBASIC2.22□□□□□ -2.05
FOXN3O00409 CARD18-203ENST00000532895 422 ntTSL 2 BASIC2.22□□□□□ -2.05
FOXN3O00409 AC073349.3-201ENST00000617616 186 ntBASIC2.22□□□□□ -2.05
FOXN3O00409 AL590808.1-201ENST00000618696 141 ntBASIC2.22□□□□□ -2.05
FOXN3O00409 MIR6873-201ENST00000622788 63 ntBASIC2.22□□□□□ -2.05
FOXN3O00409 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC2.22□□□□□ -2.05
FOXN3O00409 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.22□□□□□ -2.05
FOXN3O00409 AC068700.1-201ENST00000565862 3754 ntBASIC2.22□□□□□ -2.05
FOXN3O00409 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
FOXN3O00409 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.21□□□□□ -2.06
FOXN3O00409 RNU1-22P-201ENST00000363334 158 ntBASIC2.21□□□□□ -2.06
FOXN3O00409 Y_RNA.172-201ENST00000363765 102 ntBASIC2.21□□□□□ -2.06
FOXN3O00409 RNU6-682P-201ENST00000363843 106 ntBASIC2.21□□□□□ -2.06
FOXN3O00409 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC2.21□□□□□ -2.06
FOXN3O00409 Y_RNA.555-201ENST00000384673 110 ntBASIC2.21□□□□□ -2.06
FOXN3O00409 MIR515-2-201ENST00000384883 83 ntBASIC2.21□□□□□ -2.06
FOXN3O00409 MIR515-1-201ENST00000384884 83 ntBASIC2.21□□□□□ -2.06
FOXN3O00409 SNORA26.5-201ENST00000391215 123 ntBASIC2.21□□□□□ -2.06
FOXN3O00409 MTCO2P33-201ENST00000402100 465 ntBASIC2.21□□□□□ -2.06
FOXN3O00409 AL603908.1-201ENST00000406098 201 ntBASIC2.21□□□□□ -2.06
FOXN3O00409 RNU6-710P-201ENST00000410424 105 ntBASIC2.21□□□□□ -2.06
FOXN3O00409 HSPE1P13-201ENST00000451143 297 ntBASIC2.21□□□□□ -2.06
FOXN3O00409 AC025033.1-201ENST00000463883 194 ntBASIC2.21□□□□□ -2.06
FOXN3O00409 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC2.21□□□□□ -2.06
FOXN3O00409 RNU1-41P-201ENST00000516161 162 ntBASIC2.21□□□□□ -2.06
FOXN3O00409 RNU1-48P-201ENST00000516400 162 ntBASIC2.21□□□□□ -2.06
FOXN3O00409 RNU6-1337P-201ENST00000516525 95 ntBASIC2.21□□□□□ -2.06
FOXN3O00409 MIR4308-201ENST00000580634 81 ntBASIC2.21□□□□□ -2.06
FOXN3O00409 AL365265.1-201ENST00000621045 234 ntBASIC2.21□□□□□ -2.06
FOXN3O00409 AP000553.5-201ENST00000641933 54 ntBASIC2.21□□□□□ -2.06
FOXN3O00409 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC2.2□□□□□ -2.06
FOXN3O00409 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
FOXN3O00409 RNU6-801P-201ENST00000364087 105 ntBASIC2.2□□□□□ -2.06
FOXN3O00409 RNU6-1019P-201ENST00000364424 107 ntBASIC2.2□□□□□ -2.06
FOXN3O00409 RNU6-1062P-201ENST00000383908 107 ntBASIC2.2□□□□□ -2.06
FOXN3O00409 RNU6-886P-201ENST00000384319 105 ntBASIC2.2□□□□□ -2.06
FOXN3O00409 RNU6-1248P-201ENST00000391096 64 ntBASIC2.2□□□□□ -2.06
FOXN3O00409 SNORA3.2-201ENST00000408221 125 ntBASIC2.2□□□□□ -2.06
FOXN3O00409 AC010154.1-201ENST00000425857 269 ntBASIC2.2□□□□□ -2.06
FOXN3O00409 AC245047.4-201ENST00000433189 144 ntBASIC2.2□□□□□ -2.06
FOXN3O00409 RNU6-717P-201ENST00000459076 104 ntBASIC2.2□□□□□ -2.06
FOXN3O00409 Y_RNA.637-201ENST00000459424 114 ntBASIC2.2□□□□□ -2.06
FOXN3O00409 RNU6-1278P-201ENST00000516130 107 ntBASIC2.2□□□□□ -2.06
FOXN3O00409 RNU1-40P-201ENST00000516816 164 ntBASIC2.2□□□□□ -2.06
FOXN3O00409 RNU1-97P-201ENST00000516872 164 ntBASIC2.2□□□□□ -2.06
FOXN3O00409 MIR4299-201ENST00000577899 72 ntBASIC2.2□□□□□ -2.06
FOXN3O00409 AC002984.1-201ENST00000591692 448 ntBASIC2.2□□□□□ -2.06
FOXN3O00409 Z83818.1-201ENST00000603584 150 ntBASIC2.2□□□□□ -2.06
FOXN3O00409 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
FOXN3O00409 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
FOXN3O00409 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
FOXN3O00409 SNORA70B-201ENST00000384210 135 ntBASIC2.19□□□□□ -2.06
FOXN3O00409 RNA5SP109-201ENST00000391010 116 ntBASIC2.19□□□□□ -2.06
FOXN3O00409 RNA5SP338-201ENST00000410495 85 ntBASIC2.19□□□□□ -2.06
FOXN3O00409 RPL23AP6-201ENST00000446637 472 ntBASIC2.19□□□□□ -2.06
FOXN3O00409 RNU7-120P-201ENST00000459334 63 ntBASIC2.19□□□□□ -2.06
FOXN3O00409 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC2.19□□□□□ -2.06
FOXN3O00409 RNU7-99P-201ENST00000516271 62 ntBASIC2.19□□□□□ -2.06
FOXN3O00409 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC2.19□□□□□ -2.06
FOXN3O00409 SUB1P4-201ENST00000566062 339 ntBASIC2.19□□□□□ -2.06
FOXN3O00409 MIR1273D-201ENST00000577266 86 ntBASIC2.19□□□□□ -2.06
FOXN3O00409 5S_rRNA.13-201ENST00000622298 123 ntBASIC2.19□□□□□ -2.06
FOXN3O00409 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
FOXN3O00409 RNU4-13P-201ENST00000364019 141 ntBASIC2.18□□□□□ -2.06
FOXN3O00409 Y_RNA.341-201ENST00000365341 102 ntBASIC2.18□□□□□ -2.06
FOXN3O00409 RNA5SP37-201ENST00000365420 130 ntBASIC2.18□□□□□ -2.06
FOXN3O00409 SNORD116-13-201ENST00000384408 92 ntBASIC2.18□□□□□ -2.06
FOXN3O00409 MIR520A-201ENST00000384862 85 ntBASIC2.18□□□□□ -2.06
FOXN3O00409 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
FOXN3O00409 RNU6-918P-201ENST00000391219 106 ntBASIC2.18□□□□□ -2.06
FOXN3O00409 RNU6ATAC15P-201ENST00000408279 121 ntBASIC2.18□□□□□ -2.06
FOXN3O00409 AL158823.1-201ENST00000418441 478 ntBASIC2.18□□□□□ -2.06
FOXN3O00409 RPL23AP42-201ENST00000471152 471 ntBASIC2.18□□□□□ -2.06
FOXN3O00409 RNU7-128P-201ENST00000517247 62 ntBASIC2.18□□□□□ -2.06
FOXN3O00409 MIR5089-201ENST00000580047 84 ntBASIC2.18□□□□□ -2.06
FOXN3O00409 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC2.18□□□□□ -2.06
FOXN3O00409 Y_RNA.783-201ENST00000613546 102 ntBASIC2.18□□□□□ -2.06
FOXN3O00409 AC064859.1-201ENST00000624741 174 ntBASIC2.18□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms