Protein–RNA interactions for Protein: Q9Y4E8

USP15, Ubiquitin carboxyl-terminal hydrolase 15, humanhuman

Predicted RBP Predictions only

Length 981 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP15Q9Y4E8 RNU6-1235P-201ENST00000384559 107 ntBASIC2.56□□□□□ -2
USP15Q9Y4E8 MIR561-201ENST00000385216 97 ntBASIC2.56□□□□□ -2
USP15Q9Y4E8 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2.56□□□□□ -2
USP15Q9Y4E8 RNA5SP247-201ENST00000411181 105 ntBASIC2.56□□□□□ -2
USP15Q9Y4E8 AC016909.1-201ENST00000415916 166 ntBASIC2.56□□□□□ -2
USP15Q9Y4E8 RNU6-498P-201ENST00000459468 107 ntBASIC2.56□□□□□ -2
USP15Q9Y4E8 RPS26P55-201ENST00000471178 356 ntBASIC2.56□□□□□ -2
USP15Q9Y4E8 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.56□□□□□ -2
USP15Q9Y4E8 RNA5SP458-201ENST00000516188 119 ntBASIC2.56□□□□□ -2
USP15Q9Y4E8 SNORA48.11-201ENST00000517015 89 ntBASIC2.56□□□□□ -2
USP15Q9Y4E8 MIR5194-201ENST00000582634 120 ntBASIC2.56□□□□□ -2
USP15Q9Y4E8 U2.22-201ENST00000636441 106 ntBASIC2.56□□□□□ -2
USP15Q9Y4E8 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.56□□□□□ -2
USP15Q9Y4E8 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
USP15Q9Y4E8 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.55□□□□□ -2
USP15Q9Y4E8 Y_RNA.23-201ENST00000362496 106 ntBASIC2.55□□□□□ -2
USP15Q9Y4E8 RNU6-271P-201ENST00000363858 105 ntBASIC2.55□□□□□ -2
USP15Q9Y4E8 Y_RNA.182-201ENST00000363880 111 ntBASIC2.55□□□□□ -2
USP15Q9Y4E8 Y_RNA.272-201ENST00000364696 102 ntBASIC2.55□□□□□ -2
USP15Q9Y4E8 Y_RNA.293-201ENST00000364908 93 ntBASIC2.55□□□□□ -2
USP15Q9Y4E8 SNORD116-13-201ENST00000384408 92 ntBASIC2.55□□□□□ -2
USP15Q9Y4E8 SNORA8.3-201ENST00000384679 139 ntBASIC2.55□□□□□ -2
USP15Q9Y4E8 SNORA80E-201ENST00000384744 137 ntBASIC2.55□□□□□ -2
USP15Q9Y4E8 Y_RNA.572-201ENST00000384757 98 ntBASIC2.55□□□□□ -2
USP15Q9Y4E8 MIR526A2-201ENST00000390198 65 ntBASIC2.55□□□□□ -2
USP15Q9Y4E8 Y_RNA.580-201ENST00000391004 95 ntBASIC2.55□□□□□ -2
USP15Q9Y4E8 MTCO1P44-201ENST00000441935 243 ntBASIC2.55□□□□□ -2
USP15Q9Y4E8 AC010531.2-201ENST00000465012 153 ntBASIC2.55□□□□□ -2
USP15Q9Y4E8 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC2.55□□□□□ -2
USP15Q9Y4E8 RN7SKP164-201ENST00000516138 266 ntBASIC2.55□□□□□ -2
USP15Q9Y4E8 AC103810.6-201ENST00000606708 136 ntBASIC2.55□□□□□ -2
USP15Q9Y4E8 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.55□□□□□ -2
USP15Q9Y4E8 FO624990.1-201ENST00000636373 85 ntBASIC2.55□□□□□ -2
USP15Q9Y4E8 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.55□□□□□ -2
USP15Q9Y4E8 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
USP15Q9Y4E8 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
USP15Q9Y4E8 Y_RNA.8-201ENST00000362353 102 ntBASIC2.54□□□□□ -2
USP15Q9Y4E8 RNU6-275P-201ENST00000364910 107 ntBASIC2.54□□□□□ -2
USP15Q9Y4E8 U8.7-201ENST00000364940 136 ntBASIC2.54□□□□□ -2
USP15Q9Y4E8 AC009238.1-201ENST00000442165 424 ntBASIC2.54□□□□□ -2
USP15Q9Y4E8 AC009237.6-201ENST00000446969 424 ntBASIC2.54□□□□□ -2
USP15Q9Y4E8 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.54□□□□□ -2
USP15Q9Y4E8 AC093259.1-201ENST00000509755 300 ntBASIC2.54□□□□□ -2
USP15Q9Y4E8 RNU6-346P-201ENST00000516288 111 ntBASIC2.54□□□□□ -2
USP15Q9Y4E8 RNU2-34P-201ENST00000516534 121 ntBASIC2.54□□□□□ -2
USP15Q9Y4E8 RNA5SP490-201ENST00000517141 136 ntBASIC2.54□□□□□ -2
USP15Q9Y4E8 MIR5688-201ENST00000580619 83 ntBASIC2.54□□□□□ -2
USP15Q9Y4E8 AC004832.4-201ENST00000608952 331 ntBASIC2.54□□□□□ -2
USP15Q9Y4E8 Y_RNA.802-201ENST00000614892 130 ntBASIC2.54□□□□□ -2
USP15Q9Y4E8 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
USP15Q9Y4E8 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.53□□□□□ -2
USP15Q9Y4E8 RNU6-1205P-201ENST00000363625 106 ntBASIC2.53□□□□□ -2
USP15Q9Y4E8 Y_RNA.332-201ENST00000365271 113 ntBASIC2.53□□□□□ -2
USP15Q9Y4E8 RNU6-438P-201ENST00000365561 103 ntBASIC2.53□□□□□ -2
USP15Q9Y4E8 RNU1-52P-201ENST00000384190 164 ntBASIC2.53□□□□□ -2
USP15Q9Y4E8 RPL36AP21-201ENST00000490372 323 ntBASIC2.53□□□□□ -2
USP15Q9Y4E8 AC005840.1-201ENST00000498412 377 ntBASIC2.53□□□□□ -2
USP15Q9Y4E8 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.53□□□□□ -2
USP15Q9Y4E8 SCARNA8-201ENST00000515924 131 ntBASIC2.53□□□□□ -2
USP15Q9Y4E8 RNA5SP20-201ENST00000515976 84 ntBASIC2.53□□□□□ -2
USP15Q9Y4E8 RNU7-115P-201ENST00000516433 55 ntBASIC2.53□□□□□ -2
USP15Q9Y4E8 RNU1-104P-201ENST00000517280 175 ntBASIC2.53□□□□□ -2
USP15Q9Y4E8 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.53□□□□□ -2
USP15Q9Y4E8 MIR548AY-201ENST00000617669 107 ntBASIC2.53□□□□□ -2
USP15Q9Y4E8 MIR6873-201ENST00000622788 63 ntBASIC2.53□□□□□ -2
USP15Q9Y4E8 AC006435.5-201ENST00000624486 112 ntBASIC2.53□□□□□ -2
USP15Q9Y4E8 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.53□□□□□ -2
USP15Q9Y4E8 AC080100.1-201ENST00000624239 5356 ntBASIC2.53□□□□□ -2
USP15Q9Y4E8 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2.01
USP15Q9Y4E8 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
USP15Q9Y4E8 MIR340-201ENST00000362125 95 ntBASIC2.52□□□□□ -2.01
USP15Q9Y4E8 Y_RNA.24-201ENST00000362508 103 ntBASIC2.52□□□□□ -2.01
USP15Q9Y4E8 RNU6-103P-201ENST00000363686 107 ntBASIC2.52□□□□□ -2.01
USP15Q9Y4E8 RNU4-84P-201ENST00000364200 139 ntBASIC2.52□□□□□ -2.01
USP15Q9Y4E8 RNU6-407P-201ENST00000365280 104 ntBASIC2.52□□□□□ -2.01
USP15Q9Y4E8 RNU6-1130P-201ENST00000365434 107 ntBASIC2.52□□□□□ -2.01
USP15Q9Y4E8 RNU6-144P-201ENST00000383951 107 ntBASIC2.52□□□□□ -2.01
USP15Q9Y4E8 RNU1-138P-201ENST00000384093 164 ntBASIC2.52□□□□□ -2.01
USP15Q9Y4E8 RNU6-578P-201ENST00000390980 103 ntBASIC2.52□□□□□ -2.01
USP15Q9Y4E8 AC008134.1-201ENST00000420943 193 ntBASIC2.52□□□□□ -2.01
USP15Q9Y4E8 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC2.52□□□□□ -2.01
USP15Q9Y4E8 SEPT7P4-201ENST00000437076 306 ntBASIC2.52□□□□□ -2.01
USP15Q9Y4E8 AL357134.1-201ENST00000445848 426 ntBASIC2.52□□□□□ -2.01
USP15Q9Y4E8 AL137159.1-201ENST00000452808 512 ntBASIC2.52□□□□□ -2.01
USP15Q9Y4E8 HMGN2P23-201ENST00000456759 269 ntBASIC2.52□□□□□ -2.01
USP15Q9Y4E8 AC117454.1-201ENST00000491120 168 ntBASIC2.52□□□□□ -2.01
USP15Q9Y4E8 AC018868.1-201ENST00000491307 315 ntBASIC2.52□□□□□ -2.01
USP15Q9Y4E8 MIR4744-201ENST00000581563 82 ntBASIC2.52□□□□□ -2.01
USP15Q9Y4E8 AP003357.1-201ENST00000604497 148 ntBASIC2.52□□□□□ -2.01
USP15Q9Y4E8 5S_rRNA.13-201ENST00000622298 123 ntBASIC2.52□□□□□ -2.01
USP15Q9Y4E8 AC068647.2-201ENST00000637380 353 ntBASIC2.52□□□□□ -2.01
USP15Q9Y4E8 AC005336.3-201ENST00000623833 2679 ntBASIC2.51□□□□□ -2.01
USP15Q9Y4E8 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.51□□□□□ -2.01
USP15Q9Y4E8 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
USP15Q9Y4E8 AL356292.1-201ENST00000283110 373 ntBASIC2.51□□□□□ -2.01
USP15Q9Y4E8 RNU6-743P-201ENST00000364151 106 ntBASIC2.51□□□□□ -2.01
USP15Q9Y4E8 RNU6-1240P-201ENST00000365155 104 ntBASIC2.51□□□□□ -2.01
USP15Q9Y4E8 RNU6-117P-201ENST00000365415 107 ntBASIC2.51□□□□□ -2.01
USP15Q9Y4E8 RNU6-969P-201ENST00000383900 105 ntBASIC2.51□□□□□ -2.01
USP15Q9Y4E8 RNU6-1323P-201ENST00000384025 107 ntBASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 173.4 ms