Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 5S_rRNA.12-201ENST00000617631 107 ntBASIC4.24□□□□□ -1.73
PDZRN3Q9UPQ7 MIR1255B1-201ENST00000636325 63 ntBASIC4.24□□□□□ -1.73
PDZRN3Q9UPQ7 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
PDZRN3Q9UPQ7 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
PDZRN3Q9UPQ7 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
PDZRN3Q9UPQ7 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
PDZRN3Q9UPQ7 MIR422A-201ENST00000362286 90 ntBASIC4.23□□□□□ -1.73
PDZRN3Q9UPQ7 Y_RNA.40-201ENST00000362645 93 ntBASIC4.23□□□□□ -1.73
PDZRN3Q9UPQ7 RNU6-363P-201ENST00000362895 105 ntBASIC4.23□□□□□ -1.73
PDZRN3Q9UPQ7 Y_RNA.155-201ENST00000363632 101 ntBASIC4.23□□□□□ -1.73
PDZRN3Q9UPQ7 RNU6-884P-201ENST00000363889 107 ntBASIC4.23□□□□□ -1.73
PDZRN3Q9UPQ7 SNORD45B-201ENST00000364617 72 ntBASIC4.23□□□□□ -1.73
PDZRN3Q9UPQ7 Y_RNA.467-201ENST00000384297 102 ntBASIC4.23□□□□□ -1.73
PDZRN3Q9UPQ7 MIR605-201ENST00000385078 83 ntBASIC4.23□□□□□ -1.73
PDZRN3Q9UPQ7 AL353813.1-201ENST00000440700 253 ntBASIC4.23□□□□□ -1.73
PDZRN3Q9UPQ7 RPS4XP11-201ENST00000446897 772 ntBASIC4.23□□□□□ -1.73
PDZRN3Q9UPQ7 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC4.23□□□□□ -1.73
PDZRN3Q9UPQ7 HMGN2P9-201ENST00000476875 229 ntBASIC4.23□□□□□ -1.73
PDZRN3Q9UPQ7 RPS27AP10-201ENST00000496103 208 ntBASIC4.23□□□□□ -1.73
PDZRN3Q9UPQ7 AC145146.1-201ENST00000496370 254 ntBASIC4.23□□□□□ -1.73
PDZRN3Q9UPQ7 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC4.23□□□□□ -1.73
PDZRN3Q9UPQ7 Y_RNA.666-201ENST00000516187 112 ntBASIC4.23□□□□□ -1.73
PDZRN3Q9UPQ7 RNU6-539P-201ENST00000516665 103 ntBASIC4.23□□□□□ -1.73
PDZRN3Q9UPQ7 ACA59.2-201ENST00000517061 156 ntBASIC4.23□□□□□ -1.73
PDZRN3Q9UPQ7 RNU7-172P-201ENST00000517125 64 ntBASIC4.23□□□□□ -1.73
PDZRN3Q9UPQ7 MIR5047-201ENST00000579212 100 ntBASIC4.23□□□□□ -1.73
PDZRN3Q9UPQ7 AC008507.4-201ENST00000585464 127 ntBASIC4.23□□□□□ -1.73
PDZRN3Q9UPQ7 AC006386.2-201ENST00000624491 75 ntBASIC4.23□□□□□ -1.73
PDZRN3Q9UPQ7 AC012005.1-201ENST00000624575 75 ntBASIC4.23□□□□□ -1.73
PDZRN3Q9UPQ7 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC4.23□□□□□ -1.73
PDZRN3Q9UPQ7 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
PDZRN3Q9UPQ7 RNU6-529P-201ENST00000363383 104 ntBASIC4.22□□□□□ -1.73
PDZRN3Q9UPQ7 SNORA51.4-201ENST00000364993 124 ntBASIC4.22□□□□□ -1.73
PDZRN3Q9UPQ7 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC4.22□□□□□ -1.73
PDZRN3Q9UPQ7 AC125388.1-201ENST00000459631 156 ntBASIC4.22□□□□□ -1.73
PDZRN3Q9UPQ7 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC4.22□□□□□ -1.73
PDZRN3Q9UPQ7 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC4.22□□□□□ -1.73
PDZRN3Q9UPQ7 POC1B-211ENST00000549504 581 ntTSL 5 BASIC4.22□□□□□ -1.73
PDZRN3Q9UPQ7 HNRNPDLP4-201ENST00000605144 301 ntBASIC4.22□□□□□ -1.73
PDZRN3Q9UPQ7 Y_RNA.773-201ENST00000607168 90 ntBASIC4.22□□□□□ -1.73
PDZRN3Q9UPQ7 U7.4-201ENST00000614961 63 ntBASIC4.22□□□□□ -1.73
PDZRN3Q9UPQ7 FAS-AS1.1-201ENST00000615327 126 ntBASIC4.22□□□□□ -1.73
PDZRN3Q9UPQ7 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC4.22□□□□□ -1.73
PDZRN3Q9UPQ7 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC4.22□□□□□ -1.73
PDZRN3Q9UPQ7 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC4.22□□□□□ -1.73
PDZRN3Q9UPQ7 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
PDZRN3Q9UPQ7 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC4.21□□□□□ -1.73
PDZRN3Q9UPQ7 AC007496.3-201ENST00000624987 3443 ntBASIC4.21□□□□□ -1.73
PDZRN3Q9UPQ7 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
PDZRN3Q9UPQ7 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
PDZRN3Q9UPQ7 FAM35BP-202ENST00000497389 3337 ntBASIC4.21□□□□□ -1.74
PDZRN3Q9UPQ7 HMGN2P10-201ENST00000448085 265 ntBASIC4.21□□□□□ -1.74
PDZRN3Q9UPQ7 AC006539.3-201ENST00000454258 129 ntBASIC4.21□□□□□ -1.74
PDZRN3Q9UPQ7 HMGN1P18-201ENST00000457642 277 ntBASIC4.21□□□□□ -1.74
PDZRN3Q9UPQ7 RNU6-693P-201ENST00000516134 107 ntBASIC4.21□□□□□ -1.74
PDZRN3Q9UPQ7 RNU2-35P-201ENST00000516446 142 ntBASIC4.21□□□□□ -1.74
PDZRN3Q9UPQ7 RNU4ATAC3P-201ENST00000516699 126 ntBASIC4.21□□□□□ -1.74
PDZRN3Q9UPQ7 AC104027.1-201ENST00000521887 300 ntBASIC4.21□□□□□ -1.74
PDZRN3Q9UPQ7 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC4.21□□□□□ -1.74
PDZRN3Q9UPQ7 AL353746.1-201ENST00000566293 6881 ntBASIC4.21□□□□□ -1.74
PDZRN3Q9UPQ7 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
PDZRN3Q9UPQ7 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC4.2□□□□□ -1.74
PDZRN3Q9UPQ7 SNORD116-10-201ENST00000363791 102 ntBASIC4.2□□□□□ -1.74
PDZRN3Q9UPQ7 RNU1-96P-201ENST00000364163 162 ntBASIC4.2□□□□□ -1.74
PDZRN3Q9UPQ7 Y_RNA.340-201ENST00000365330 92 ntBASIC4.2□□□□□ -1.74
PDZRN3Q9UPQ7 MIR1265-201ENST00000408444 86 ntBASIC4.2□□□□□ -1.74
PDZRN3Q9UPQ7 AC010099.1-201ENST00000455434 375 ntBASIC4.2□□□□□ -1.74
PDZRN3Q9UPQ7 AC006445.1-201ENST00000491925 405 ntBASIC4.2□□□□□ -1.74
PDZRN3Q9UPQ7 AC090255.1-201ENST00000495779 349 ntBASIC4.2□□□□□ -1.74
PDZRN3Q9UPQ7 RN7SKP282-201ENST00000516824 299 ntBASIC4.2□□□□□ -1.74
PDZRN3Q9UPQ7 AC068657.1-201ENST00000520807 306 ntBASIC4.2□□□□□ -1.74
PDZRN3Q9UPQ7 MIR4305-201ENST00000583252 102 ntBASIC4.2□□□□□ -1.74
PDZRN3Q9UPQ7 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC4.2□□□□□ -1.74
PDZRN3Q9UPQ7 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC4.2□□□□□ -1.74
PDZRN3Q9UPQ7 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
PDZRN3Q9UPQ7 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC4.2□□□□□ -1.74
PDZRN3Q9UPQ7 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC4.19□□□□□ -1.74
PDZRN3Q9UPQ7 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
PDZRN3Q9UPQ7 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC4.19□□□□□ -1.74
PDZRN3Q9UPQ7 MIR518F-201ENST00000384973 87 ntBASIC4.19□□□□□ -1.74
PDZRN3Q9UPQ7 RNU2-40P-201ENST00000410833 196 ntBASIC4.19□□□□□ -1.74
PDZRN3Q9UPQ7 AC107083.1-201ENST00000439643 279 ntBASIC4.19□□□□□ -1.74
PDZRN3Q9UPQ7 SCARNA20.6-201ENST00000517251 106 ntBASIC4.19□□□□□ -1.74
PDZRN3Q9UPQ7 AC004486.1-201ENST00000546846 233 ntBASIC4.19□□□□□ -1.74
PDZRN3Q9UPQ7 JPX_2.1-201ENST00000614161 69 ntBASIC4.19□□□□□ -1.74
PDZRN3Q9UPQ7 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC4.19□□□□□ -1.74
PDZRN3Q9UPQ7 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC4.19□□□□□ -1.74
PDZRN3Q9UPQ7 AC010733.2-201ENST00000589496 5702 ntBASIC4.19□□□□□ -1.74
PDZRN3Q9UPQ7 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC4.18□□□□□ -1.74
PDZRN3Q9UPQ7 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
PDZRN3Q9UPQ7 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC4.18□□□□□ -1.74
PDZRN3Q9UPQ7 RNU6-438P-201ENST00000365561 103 ntBASIC4.18□□□□□ -1.74
PDZRN3Q9UPQ7 SNORD58A-201ENST00000383875 65 ntBASIC4.18□□□□□ -1.74
PDZRN3Q9UPQ7 SNORD14D-201ENST00000384390 87 ntBASIC4.18□□□□□ -1.74
PDZRN3Q9UPQ7 Z98742.3-201ENST00000418637 326 ntBASIC4.18□□□□□ -1.74
PDZRN3Q9UPQ7 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC4.18□□□□□ -1.74
PDZRN3Q9UPQ7 AC011604.1-201ENST00000545978 196 ntBASIC4.18□□□□□ -1.74
PDZRN3Q9UPQ7 MIR7106-201ENST00000612419 65 ntBASIC4.18□□□□□ -1.74
PDZRN3Q9UPQ7 MIR203B-201ENST00000636080 86 ntBASIC4.18□□□□□ -1.74
PDZRN3Q9UPQ7 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 124.1 ms