Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 SNORA67.1-201ENST00000364749 141 ntBASIC4.27□□□□□ -1.73
RTN4Q9NQC3 SNORA4.2-201ENST00000365313 147 ntBASIC4.27□□□□□ -1.73
RTN4Q9NQC3 Y_RNA.686-201ENST00000516548 134 ntBASIC4.27□□□□□ -1.73
RTN4Q9NQC3 MIR3200-201ENST00000580767 85 ntBASIC4.27□□□□□ -1.73
RTN4Q9NQC3 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.27□□□□□ -1.73
RTN4Q9NQC3 RPL12P50-201ENST00000603116 116 ntBASIC4.27□□□□□ -1.73
RTN4Q9NQC3 AC008745.1-201ENST00000604064 271 ntBASIC4.27□□□□□ -1.73
RTN4Q9NQC3 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC4.27□□□□□ -1.73
RTN4Q9NQC3 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
RTN4Q9NQC3 RNY1P11-201ENST00000363759 113 ntBASIC4.26□□□□□ -1.73
RTN4Q9NQC3 SNORD23.1-201ENST00000408212 104 ntBASIC4.26□□□□□ -1.73
RTN4Q9NQC3 RNA5SP100-201ENST00000410903 110 ntBASIC4.26□□□□□ -1.73
RTN4Q9NQC3 RNA5SP59-201ENST00000410922 110 ntBASIC4.26□□□□□ -1.73
RTN4Q9NQC3 RNA5SP208-201ENST00000516156 78 ntBASIC4.26□□□□□ -1.73
RTN4Q9NQC3 5S_rRNA.3-201ENST00000517021 110 ntBASIC4.26□□□□□ -1.73
RTN4Q9NQC3 RNA5SP380-201ENST00000517190 98 ntBASIC4.26□□□□□ -1.73
RTN4Q9NQC3 MIR3138-201ENST00000585238 82 ntBASIC4.26□□□□□ -1.73
RTN4Q9NQC3 AC091167.4-201ENST00000605079 184 ntBASIC4.26□□□□□ -1.73
RTN4Q9NQC3 5S_rRNA.19-201ENST00000612131 110 ntBASIC4.26□□□□□ -1.73
RTN4Q9NQC3 5S_rRNA.18-201ENST00000621941 110 ntBASIC4.26□□□□□ -1.73
RTN4Q9NQC3 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
RTN4Q9NQC3 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC4.26□□□□□ -1.73
RTN4Q9NQC3 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC4.26□□□□□ -1.73
RTN4Q9NQC3 RNA5SP212-201ENST00000391223 107 ntBASIC4.25□□□□□ -1.73
RTN4Q9NQC3 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC4.25□□□□□ -1.73
RTN4Q9NQC3 AC015922.2-201ENST00000435593 184 ntBASIC4.25□□□□□ -1.73
RTN4Q9NQC3 RPL21P10-201ENST00000463521 490 ntBASIC4.25□□□□□ -1.73
RTN4Q9NQC3 SNORA64.4-201ENST00000516632 81 ntBASIC4.25□□□□□ -1.73
RTN4Q9NQC3 RN7SKP209-201ENST00000516888 304 ntBASIC4.25□□□□□ -1.73
RTN4Q9NQC3 RNA5SP179-201ENST00000517284 121 ntBASIC4.25□□□□□ -1.73
RTN4Q9NQC3 AP003730.1-201ENST00000524605 285 ntBASIC4.25□□□□□ -1.73
RTN4Q9NQC3 MIR4277-201ENST00000578298 84 ntBASIC4.25□□□□□ -1.73
RTN4Q9NQC3 MIR378J-201ENST00000611988 109 ntBASIC4.25□□□□□ -1.73
RTN4Q9NQC3 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
RTN4Q9NQC3 AC093908.1-201ENST00000623125 8092 ntBASIC4.25□□□□□ -1.73
RTN4Q9NQC3 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
RTN4Q9NQC3 RNU6-834P-201ENST00000362367 110 ntBASIC4.24□□□□□ -1.73
RTN4Q9NQC3 SNORD56.3-201ENST00000363507 71 ntBASIC4.24□□□□□ -1.73
RTN4Q9NQC3 SNORA62-201ENST00000365493 153 ntBASIC4.24□□□□□ -1.73
RTN4Q9NQC3 AL627390.1-201ENST00000396055 340 ntBASIC4.24□□□□□ -1.73
RTN4Q9NQC3 RPL18P10-201ENST00000425606 538 ntBASIC4.24□□□□□ -1.73
RTN4Q9NQC3 AC092017.2-201ENST00000427600 362 ntBASIC4.24□□□□□ -1.73
RTN4Q9NQC3 AL158147.1-201ENST00000443970 75 ntBASIC4.24□□□□□ -1.73
RTN4Q9NQC3 RNU7-80P-201ENST00000459562 61 ntBASIC4.24□□□□□ -1.73
RTN4Q9NQC3 RNU6-1149P-201ENST00000516810 97 ntBASIC4.24□□□□□ -1.73
RTN4Q9NQC3 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC4.24□□□□□ -1.73
RTN4Q9NQC3 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
RTN4Q9NQC3 SNORA1.2-201ENST00000365189 134 ntBASIC4.23□□□□□ -1.73
RTN4Q9NQC3 Y_RNA.454-201ENST00000384224 113 ntBASIC4.23□□□□□ -1.73
RTN4Q9NQC3 MIR660-201ENST00000385235 97 ntBASIC4.23□□□□□ -1.73
RTN4Q9NQC3 MIR199A2-201ENST00000385289 110 ntBASIC4.23□□□□□ -1.73
RTN4Q9NQC3 AC011753.1-201ENST00000451001 220 ntBASIC4.23□□□□□ -1.73
RTN4Q9NQC3 AC055731.1-201ENST00000474387 401 ntBASIC4.23□□□□□ -1.73
RTN4Q9NQC3 RN7SL504P-201ENST00000494496 287 ntBASIC4.23□□□□□ -1.73
RTN4Q9NQC3 RNA5SP385-201ENST00000515947 110 ntBASIC4.23□□□□□ -1.73
RTN4Q9NQC3 RNU6-1234P-201ENST00000516877 103 ntBASIC4.23□□□□□ -1.73
RTN4Q9NQC3 MIR2276-201ENST00000516886 89 ntBASIC4.23□□□□□ -1.73
RTN4Q9NQC3 MIR4778-201ENST00000577635 80 ntBASIC4.23□□□□□ -1.73
RTN4Q9NQC3 MIR5194-201ENST00000582634 120 ntBASIC4.23□□□□□ -1.73
RTN4Q9NQC3 AC021506.2-201ENST00000612354 169 ntBASIC4.23□□□□□ -1.73
RTN4Q9NQC3 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
RTN4Q9NQC3 MTND5P32-201ENST00000560711 1802 ntBASIC4.23□□□□□ -1.73
RTN4Q9NQC3 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
RTN4Q9NQC3 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
RTN4Q9NQC3 Y_RNA.114-201ENST00000363265 113 ntBASIC4.22□□□□□ -1.73
RTN4Q9NQC3 Y_RNA.273-201ENST00000364703 102 ntBASIC4.22□□□□□ -1.73
RTN4Q9NQC3 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC4.22□□□□□ -1.73
RTN4Q9NQC3 AP003484.1-201ENST00000530974 250 ntBASIC4.22□□□□□ -1.73
RTN4Q9NQC3 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC4.22□□□□□ -1.73
RTN4Q9NQC3 AL137849.1-201ENST00000604767 169 ntBASIC4.22□□□□□ -1.73
RTN4Q9NQC3 AL022345.2-201ENST00000606307 135 ntBASIC4.22□□□□□ -1.73
RTN4Q9NQC3 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC4.22□□□□□ -1.73
RTN4Q9NQC3 FTX-214ENST00000638437 12267 ntTSL 5 BASIC4.22□□□□□ -1.73
RTN4Q9NQC3 AL136360.1-201ENST00000503377 1900 ntBASIC4.21□□□□□ -1.74
RTN4Q9NQC3 SNORA2.2-201ENST00000365473 135 ntBASIC4.21□□□□□ -1.74
RTN4Q9NQC3 AC107297.1-201ENST00000459991 176 ntBASIC4.21□□□□□ -1.74
RTN4Q9NQC3 RNU6-659P-201ENST00000516454 104 ntBASIC4.21□□□□□ -1.74
RTN4Q9NQC3 RNU6-1116P-201ENST00000517269 99 ntBASIC4.21□□□□□ -1.74
RTN4Q9NQC3 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
RTN4Q9NQC3 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
RTN4Q9NQC3 AL442644.1-201ENST00000454390 3105 ntBASIC4.2□□□□□ -1.74
RTN4Q9NQC3 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
RTN4Q9NQC3 MIR424-201ENST00000362227 98 ntBASIC4.2□□□□□ -1.74
RTN4Q9NQC3 RNA5SP130-201ENST00000364431 114 ntBASIC4.2□□□□□ -1.74
RTN4Q9NQC3 MIR136-201ENST00000385207 82 ntBASIC4.2□□□□□ -1.74
RTN4Q9NQC3 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC4.2□□□□□ -1.74
RTN4Q9NQC3 RNA5SP57-201ENST00000459463 123 ntBASIC4.2□□□□□ -1.74
RTN4Q9NQC3 RN7SL385P-201ENST00000468873 276 ntBASIC4.2□□□□□ -1.74
RTN4Q9NQC3 Y_RNA.712-201ENST00000517011 92 ntBASIC4.2□□□□□ -1.74
RTN4Q9NQC3 AC104027.1-201ENST00000521887 300 ntBASIC4.2□□□□□ -1.74
RTN4Q9NQC3 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC4.2□□□□□ -1.74
RTN4Q9NQC3 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
RTN4Q9NQC3 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC4.19□□□□□ -1.74
RTN4Q9NQC3 HMGN1P18-201ENST00000457642 277 ntBASIC4.19□□□□□ -1.74
RTN4Q9NQC3 RNU5E-3P-201ENST00000515913 68 ntBASIC4.19□□□□□ -1.74
RTN4Q9NQC3 SNORA18.7-201ENST00000516910 131 ntBASIC4.19□□□□□ -1.74
RTN4Q9NQC3 RNU2-60P-201ENST00000517290 128 ntBASIC4.19□□□□□ -1.74
RTN4Q9NQC3 MIR4697-201ENST00000582977 78 ntBASIC4.19□□□□□ -1.74
RTN4Q9NQC3 SNORD3E-202ENST00000627253 216 ntBASIC4.19□□□□□ -1.74
RTN4Q9NQC3 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 487.4 ms