Protein–RNA interactions for Protein: Q9HD42

CHMP1A, Charged multivesicular body protein 1a, humanhuman

Predicted RBP Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1AQ9HD42 Y_RNA.214-201ENST00000364201 112 ntBASIC1.51□□□□□ -2.17
CHMP1AQ9HD42 Y_RNA.265-201ENST00000364677 108 ntBASIC1.51□□□□□ -2.17
CHMP1AQ9HD42 Y_RNA.310-201ENST00000365063 113 ntBASIC1.51□□□□□ -2.17
CHMP1AQ9HD42 RNU1-78P-201ENST00000391248 165 ntBASIC1.51□□□□□ -2.17
CHMP1AQ9HD42 AL590004.1-201ENST00000405321 300 ntBASIC1.51□□□□□ -2.17
CHMP1AQ9HD42 RNU6-855P-201ENST00000410395 104 ntBASIC1.51□□□□□ -2.17
CHMP1AQ9HD42 RNU2-2P-201ENST00000410396 191 ntBASIC1.51□□□□□ -2.17
CHMP1AQ9HD42 PGBD4P5-201ENST00000445958 426 ntBASIC1.51□□□□□ -2.17
CHMP1AQ9HD42 SEPT14P8-201ENST00000508026 178 ntBASIC1.51□□□□□ -2.17
CHMP1AQ9HD42 AC131281.1-201ENST00000522984 164 ntBASIC1.51□□□□□ -2.17
CHMP1AQ9HD42 AL358944.1-201ENST00000528537 144 ntBASIC1.51□□□□□ -2.17
CHMP1AQ9HD42 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
CHMP1AQ9HD42 SNORA28-201ENST00000606769 126 ntBASIC1.51□□□□□ -2.17
CHMP1AQ9HD42 AC073349.3-201ENST00000617616 186 ntBASIC1.51□□□□□ -2.17
CHMP1AQ9HD42 AC022140.2-201ENST00000623500 188 ntBASIC1.51□□□□□ -2.17
CHMP1AQ9HD42 Y_RNA.222-201ENST00000364264 102 ntBASIC1.5□□□□□ -2.17
CHMP1AQ9HD42 RNU4-41P-201ENST00000364426 143 ntBASIC1.5□□□□□ -2.17
CHMP1AQ9HD42 SNORD48-201ENST00000364953 64 ntBASIC1.5□□□□□ -2.17
CHMP1AQ9HD42 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.5□□□□□ -2.17
CHMP1AQ9HD42 Y_RNA.383-201ENST00000383855 97 ntBASIC1.5□□□□□ -2.17
CHMP1AQ9HD42 MIR513A1-201ENST00000385138 129 ntBASIC1.5□□□□□ -2.17
CHMP1AQ9HD42 SNORA3.2-201ENST00000408221 125 ntBASIC1.5□□□□□ -2.17
CHMP1AQ9HD42 RNU6-710P-201ENST00000410424 105 ntBASIC1.5□□□□□ -2.17
CHMP1AQ9HD42 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.5□□□□□ -2.17
CHMP1AQ9HD42 CALM2P4-201ENST00000430810 426 ntBASIC1.5□□□□□ -2.17
CHMP1AQ9HD42 Z98949.2-201ENST00000440996 144 ntBASIC1.5□□□□□ -2.17
CHMP1AQ9HD42 HSPE1P25-201ENST00000455484 251 ntBASIC1.5□□□□□ -2.17
CHMP1AQ9HD42 AL049830.1-201ENST00000468034 425 ntBASIC1.5□□□□□ -2.17
CHMP1AQ9HD42 HMGN1P10-201ENST00000474557 553 ntBASIC1.5□□□□□ -2.17
CHMP1AQ9HD42 RNU6-496P-201ENST00000516145 99 ntBASIC1.5□□□□□ -2.17
CHMP1AQ9HD42 RNU6-970P-201ENST00000516312 107 ntBASIC1.5□□□□□ -2.17
CHMP1AQ9HD42 SUMO2P16-201ENST00000519475 264 ntBASIC1.5□□□□□ -2.17
CHMP1AQ9HD42 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.5□□□□□ -2.17
CHMP1AQ9HD42 AL355297.3-201ENST00000604082 446 ntBASIC1.5□□□□□ -2.17
CHMP1AQ9HD42 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.5□□□□□ -2.17
CHMP1AQ9HD42 AL513423.1-201ENST00000621695 132 ntBASIC1.5□□□□□ -2.17
CHMP1AQ9HD42 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC1.5□□□□□ -2.17
CHMP1AQ9HD42 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.49□□□□□ -2.17
CHMP1AQ9HD42 Y_RNA.26-201ENST00000362539 101 ntBASIC1.49□□□□□ -2.17
CHMP1AQ9HD42 RNU4-13P-201ENST00000364019 141 ntBASIC1.49□□□□□ -2.17
CHMP1AQ9HD42 Y_RNA.210-201ENST00000364161 110 ntBASIC1.49□□□□□ -2.17
CHMP1AQ9HD42 RNU6-806P-201ENST00000365147 105 ntBASIC1.49□□□□□ -2.17
CHMP1AQ9HD42 Y_RNA.368-201ENST00000365547 113 ntBASIC1.49□□□□□ -2.17
CHMP1AQ9HD42 RNU6-1080P-201ENST00000383982 107 ntBASIC1.49□□□□□ -2.17
CHMP1AQ9HD42 RNU6-424P-201ENST00000384367 105 ntBASIC1.49□□□□□ -2.17
CHMP1AQ9HD42 MIR634-201ENST00000385208 97 ntBASIC1.49□□□□□ -2.17
CHMP1AQ9HD42 U8.16-201ENST00000391279 133 ntBASIC1.49□□□□□ -2.17
CHMP1AQ9HD42 Y_RNA.602-201ENST00000410535 92 ntBASIC1.49□□□□□ -2.17
CHMP1AQ9HD42 AC003989.2-201ENST00000440224 169 ntBASIC1.49□□□□□ -2.17
CHMP1AQ9HD42 AC027119.1-201ENST00000440877 241 ntBASIC1.49□□□□□ -2.17
CHMP1AQ9HD42 AC098869.1-201ENST00000481627 292 ntBASIC1.49□□□□□ -2.17
CHMP1AQ9HD42 RNA5SP168-201ENST00000516642 112 ntBASIC1.49□□□□□ -2.17
CHMP1AQ9HD42 RNU7-28P-201ENST00000516759 62 ntBASIC1.49□□□□□ -2.17
CHMP1AQ9HD42 MIR4422-201ENST00000581938 83 ntBASIC1.49□□□□□ -2.17
CHMP1AQ9HD42 AC005972.2-201ENST00000604690 348 ntBASIC1.49□□□□□ -2.17
CHMP1AQ9HD42 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.49□□□□□ -2.17
CHMP1AQ9HD42 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.49□□□□□ -2.17
CHMP1AQ9HD42 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.48□□□□□ -2.17
CHMP1AQ9HD42 MIRLET7C-201ENST00000362160 84 ntBASIC1.48□□□□□ -2.17
CHMP1AQ9HD42 RNU4-80P-201ENST00000363200 141 ntBASIC1.48□□□□□ -2.17
CHMP1AQ9HD42 RNU6-770P-201ENST00000363929 105 ntBASIC1.48□□□□□ -2.17
CHMP1AQ9HD42 Y_RNA.341-201ENST00000365341 102 ntBASIC1.48□□□□□ -2.17
CHMP1AQ9HD42 Y_RNA.418-201ENST00000384029 102 ntBASIC1.48□□□□□ -2.17
CHMP1AQ9HD42 MIR660-201ENST00000385235 97 ntBASIC1.48□□□□□ -2.17
CHMP1AQ9HD42 RNA5SP482-201ENST00000391269 118 ntBASIC1.48□□□□□ -2.17
CHMP1AQ9HD42 RNU6-985P-201ENST00000410182 104 ntBASIC1.48□□□□□ -2.17
CHMP1AQ9HD42 POLR2KP2-201ENST00000438155 177 ntBASIC1.48□□□□□ -2.17
CHMP1AQ9HD42 LINC01399-202ENST00000458450 244 ntBASIC1.48□□□□□ -2.17
CHMP1AQ9HD42 AC107393.1-201ENST00000512403 346 ntBASIC1.48□□□□□ -2.17
CHMP1AQ9HD42 RNU6-764P-201ENST00000516396 105 ntBASIC1.48□□□□□ -2.17
CHMP1AQ9HD42 AC019176.1-201ENST00000518519 225 ntBASIC1.48□□□□□ -2.17
CHMP1AQ9HD42 AP003072.1-201ENST00000531740 145 ntBASIC1.48□□□□□ -2.17
CHMP1AQ9HD42 AC011604.1-201ENST00000545978 196 ntBASIC1.48□□□□□ -2.17
CHMP1AQ9HD42 SNORD3E-202ENST00000627253 216 ntBASIC1.48□□□□□ -2.17
CHMP1AQ9HD42 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
CHMP1AQ9HD42 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.48□□□□□ -2.17
CHMP1AQ9HD42 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
CHMP1AQ9HD42 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
CHMP1AQ9HD42 U8.2-201ENST00000363156 134 ntBASIC1.47□□□□□ -2.17
CHMP1AQ9HD42 RNU6-694P-201ENST00000364071 147 ntBASIC1.47□□□□□ -2.17
CHMP1AQ9HD42 Y_RNA.276-201ENST00000364732 109 ntBASIC1.47□□□□□ -2.17
CHMP1AQ9HD42 RNA5SP259-201ENST00000365541 109 ntBASIC1.47□□□□□ -2.17
CHMP1AQ9HD42 RNU6-639P-201ENST00000384074 107 ntBASIC1.47□□□□□ -2.17
CHMP1AQ9HD42 Y_RNA.456-201ENST00000384232 111 ntBASIC1.47□□□□□ -2.17
CHMP1AQ9HD42 RPS27P16-201ENST00000425758 201 ntBASIC1.47□□□□□ -2.17
CHMP1AQ9HD42 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.47□□□□□ -2.17
CHMP1AQ9HD42 AC245517.4-201ENST00000448601 281 ntBASIC1.47□□□□□ -2.17
CHMP1AQ9HD42 RNU1-98P-201ENST00000458992 160 ntBASIC1.47□□□□□ -2.17
CHMP1AQ9HD42 AC079140.2-201ENST00000506193 142 ntBASIC1.47□□□□□ -2.17
CHMP1AQ9HD42 RNA5SP445-201ENST00000515889 115 ntBASIC1.47□□□□□ -2.17
CHMP1AQ9HD42 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.47□□□□□ -2.17
CHMP1AQ9HD42 PRR13P7-201ENST00000605538 430 ntBASIC1.47□□□□□ -2.17
CHMP1AQ9HD42 AL365434.2-201ENST00000607979 234 ntBASIC1.47□□□□□ -2.17
CHMP1AQ9HD42 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.47□□□□□ -2.17
CHMP1AQ9HD42 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.46□□□□□ -2.17
CHMP1AQ9HD42 Y_RNA.19-201ENST00000362462 99 ntBASIC1.46□□□□□ -2.18
CHMP1AQ9HD42 snoU2_19.2-201ENST00000363024 80 ntBASIC1.46□□□□□ -2.18
CHMP1AQ9HD42 Y_RNA.326-201ENST00000365176 113 ntBASIC1.46□□□□□ -2.18
CHMP1AQ9HD42 RNU6-1323P-201ENST00000384025 107 ntBASIC1.46□□□□□ -2.18
CHMP1AQ9HD42 Y_RNA.581-201ENST00000391017 97 ntBASIC1.46□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 152.3 ms