Protein–RNA interactions for Protein: Q9H2S5

RNF39, RING finger protein 39, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39Q9H2S5 RPS29P12-201ENST00000460178 152 ntBASIC4.9□□□□□ -1.63
RNF39Q9H2S5 RNA5SP464-201ENST00000516251 108 ntBASIC4.9□□□□□ -1.63
RNF39Q9H2S5 MIR3939-201ENST00000582614 106 ntBASIC4.9□□□□□ -1.63
RNF39Q9H2S5 AC114781.5-201ENST00000615297 108 ntBASIC4.9□□□□□ -1.63
RNF39Q9H2S5 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
RNF39Q9H2S5 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
RNF39Q9H2S5 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
RNF39Q9H2S5 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
RNF39Q9H2S5 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
RNF39Q9H2S5 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
RNF39Q9H2S5 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
RNF39Q9H2S5 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.89□□□□□ -1.63
RNF39Q9H2S5 RNU1-91P-201ENST00000364746 163 ntBASIC4.89□□□□□ -1.63
RNF39Q9H2S5 HSPE1P9-201ENST00000440046 311 ntBASIC4.89□□□□□ -1.63
RNF39Q9H2S5 AC090602.1-201ENST00000469695 252 ntBASIC4.89□□□□□ -1.63
RNF39Q9H2S5 RNU6-667P-201ENST00000517186 102 ntBASIC4.89□□□□□ -1.63
RNF39Q9H2S5 MTRNR2L2-201ENST00000604882 87 ntBASIC4.89□□□□□ -1.63
RNF39Q9H2S5 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
RNF39Q9H2S5 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
RNF39Q9H2S5 RN7SL303P-201ENST00000469773 251 ntBASIC4.88□□□□□ -1.63
RNF39Q9H2S5 AC109327.1-201ENST00000471666 403 ntBASIC4.88□□□□□ -1.63
RNF39Q9H2S5 RNU1-61P-201ENST00000516107 151 ntBASIC4.88□□□□□ -1.63
RNF39Q9H2S5 SNORA4-201ENST00000584302 138 ntBASIC4.88□□□□□ -1.63
RNF39Q9H2S5 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC4.88□□□□□ -1.63
RNF39Q9H2S5 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
RNF39Q9H2S5 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
RNF39Q9H2S5 AC005005.4-201ENST00000623789 16698 ntBASIC4.87□□□□□ -1.63
RNF39Q9H2S5 Z95331.1-201ENST00000623075 23112 ntBASIC4.87□□□□□ -1.63
RNF39Q9H2S5 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC4.87□□□□□ -1.63
RNF39Q9H2S5 Y_RNA.99-201ENST00000363138 105 ntBASIC4.87□□□□□ -1.63
RNF39Q9H2S5 RNU1-83P-201ENST00000363426 164 ntBASIC4.87□□□□□ -1.63
RNF39Q9H2S5 AC017083.1-201ENST00000428093 483 ntBASIC4.87□□□□□ -1.63
RNF39Q9H2S5 CYP2C59P-201ENST00000457790 269 ntBASIC4.87□□□□□ -1.63
RNF39Q9H2S5 RNU6-1089P-201ENST00000516473 104 ntBASIC4.87□□□□□ -1.63
RNF39Q9H2S5 RNU6-894P-201ENST00000517094 105 ntBASIC4.87□□□□□ -1.63
RNF39Q9H2S5 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC4.87□□□□□ -1.63
RNF39Q9H2S5 MIR6891-201ENST00000618788 93 ntBASIC4.87□□□□□ -1.63
RNF39Q9H2S5 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
RNF39Q9H2S5 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
RNF39Q9H2S5 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
RNF39Q9H2S5 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC4.87□□□□□ -1.63
RNF39Q9H2S5 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC4.87□□□□□ -1.63
RNF39Q9H2S5 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
RNF39Q9H2S5 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC4.86□□□□□ -1.63
RNF39Q9H2S5 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC4.86□□□□□ -1.63
RNF39Q9H2S5 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
RNF39Q9H2S5 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
RNF39Q9H2S5 FO393413.1-201ENST00000402892 195 ntBASIC4.86□□□□□ -1.63
RNF39Q9H2S5 AL023284.1-201ENST00000403956 276 ntBASIC4.86□□□□□ -1.63
RNF39Q9H2S5 RN7SKP177-201ENST00000410567 355 ntBASIC4.86□□□□□ -1.63
RNF39Q9H2S5 RN7SL98P-201ENST00000462271 300 ntBASIC4.86□□□□□ -1.63
RNF39Q9H2S5 RN7SL810P-201ENST00000493031 276 ntBASIC4.86□□□□□ -1.63
RNF39Q9H2S5 AC023424.1-201ENST00000496058 459 ntBASIC4.86□□□□□ -1.63
RNF39Q9H2S5 AC015795.1-201ENST00000513669 327 ntBASIC4.86□□□□□ -1.63
RNF39Q9H2S5 Vault.1-201ENST00000516474 102 ntBASIC4.86□□□□□ -1.63
RNF39Q9H2S5 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
RNF39Q9H2S5 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
RNF39Q9H2S5 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
RNF39Q9H2S5 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
RNF39Q9H2S5 AC107068.1-201ENST00000563286 4218 ntBASIC4.86□□□□□ -1.63
RNF39Q9H2S5 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
RNF39Q9H2S5 AC010300.1-201ENST00000600671 5134 ntBASIC4.85□□□□□ -1.63
RNF39Q9H2S5 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
RNF39Q9H2S5 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC4.85□□□□□ -1.63
RNF39Q9H2S5 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
RNF39Q9H2S5 AL133547.1-201ENST00000448546 220 ntBASIC4.85□□□□□ -1.63
RNF39Q9H2S5 snoU13.2-201ENST00000459201 104 ntBASIC4.85□□□□□ -1.63
RNF39Q9H2S5 Y_RNA.809-201ENST00000516058 95 ntBASIC4.85□□□□□ -1.63
RNF39Q9H2S5 RNU7-43P-201ENST00000516554 64 ntBASIC4.85□□□□□ -1.63
RNF39Q9H2S5 MIR6716-201ENST00000613413 80 ntBASIC4.85□□□□□ -1.63
RNF39Q9H2S5 MIR6509-201ENST00000614603 85 ntBASIC4.85□□□□□ -1.63
RNF39Q9H2S5 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC4.85□□□□□ -1.63
RNF39Q9H2S5 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
RNF39Q9H2S5 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
RNF39Q9H2S5 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
RNF39Q9H2S5 RNU6-1260P-201ENST00000362944 107 ntBASIC4.84□□□□□ -1.63
RNF39Q9H2S5 RNU6-1039P-201ENST00000383931 107 ntBASIC4.84□□□□□ -1.63
RNF39Q9H2S5 MIR95-201ENST00000385072 81 ntBASIC4.84□□□□□ -1.63
RNF39Q9H2S5 RNU6-269P-201ENST00000391077 97 ntBASIC4.84□□□□□ -1.63
RNF39Q9H2S5 AC004975.1-201ENST00000428733 208 ntBASIC4.84□□□□□ -1.63
RNF39Q9H2S5 AC098934.3-201ENST00000430450 190 ntBASIC4.84□□□□□ -1.63
RNF39Q9H2S5 RNU6-531P-201ENST00000516694 104 ntBASIC4.84□□□□□ -1.63
RNF39Q9H2S5 SNORA48.11-201ENST00000517015 89 ntBASIC4.84□□□□□ -1.63
RNF39Q9H2S5 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
RNF39Q9H2S5 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.84□□□□□ -1.63
RNF39Q9H2S5 AC015688.6-201ENST00000577737 104 ntBASIC4.84□□□□□ -1.63
RNF39Q9H2S5 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC4.84□□□□□ -1.63
RNF39Q9H2S5 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC4.84□□□□□ -1.64
RNF39Q9H2S5 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.64
RNF39Q9H2S5 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.84□□□□□ -1.64
RNF39Q9H2S5 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
RNF39Q9H2S5 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
RNF39Q9H2S5 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
RNF39Q9H2S5 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.83□□□□□ -1.64
RNF39Q9H2S5 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
RNF39Q9H2S5 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
RNF39Q9H2S5 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
RNF39Q9H2S5 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
RNF39Q9H2S5 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.83□□□□□ -1.64
RNF39Q9H2S5 RNU4-58P-201ENST00000363192 141 ntBASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 141.2 ms