Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 RNU6-234P-201ENST00000365229 104 ntBASIC3.58□□□□□ -1.84
CNTNAP3Q9BZ76 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CNTNAP3Q9BZ76 RNU6-1235P-201ENST00000384559 107 ntBASIC3.58□□□□□ -1.84
CNTNAP3Q9BZ76 SNORD66.1-201ENST00000391230 76 ntBASIC3.58□□□□□ -1.84
CNTNAP3Q9BZ76 RNU6-498P-201ENST00000459468 107 ntBASIC3.58□□□□□ -1.84
CNTNAP3Q9BZ76 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC3.58□□□□□ -1.84
CNTNAP3Q9BZ76 AC145423.2-201ENST00000610631 239 ntBASIC3.58□□□□□ -1.84
CNTNAP3Q9BZ76 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CNTNAP3Q9BZ76 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.57□□□□□ -1.84
CNTNAP3Q9BZ76 MAPK10-373ENST00000641983 6772 ntBASIC3.57□□□□□ -1.84
CNTNAP3Q9BZ76 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CNTNAP3Q9BZ76 FAM35DP-201ENST00000323387 2712 ntBASIC3.57□□□□□ -1.84
CNTNAP3Q9BZ76 RNU6-633P-201ENST00000362612 103 ntBASIC3.57□□□□□ -1.84
CNTNAP3Q9BZ76 SNORD116-10-201ENST00000363791 102 ntBASIC3.57□□□□□ -1.84
CNTNAP3Q9BZ76 Y_RNA.242-201ENST00000364473 110 ntBASIC3.57□□□□□ -1.84
CNTNAP3Q9BZ76 RNU1-89P-201ENST00000384592 164 ntBASIC3.57□□□□□ -1.84
CNTNAP3Q9BZ76 RNU6-679P-201ENST00000391003 106 ntBASIC3.57□□□□□ -1.84
CNTNAP3Q9BZ76 MIR887-201ENST00000401258 79 ntBASIC3.57□□□□□ -1.84
CNTNAP3Q9BZ76 RNU2-40P-201ENST00000410833 196 ntBASIC3.57□□□□□ -1.84
CNTNAP3Q9BZ76 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.57□□□□□ -1.84
CNTNAP3Q9BZ76 AC099677.2-201ENST00000436385 175 ntBASIC3.57□□□□□ -1.84
CNTNAP3Q9BZ76 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.57□□□□□ -1.84
CNTNAP3Q9BZ76 AC114801.3-201ENST00000510231 177 ntBASIC3.57□□□□□ -1.84
CNTNAP3Q9BZ76 SCGB1D5P-201ENST00000515134 247 ntBASIC3.57□□□□□ -1.84
CNTNAP3Q9BZ76 MIR449C-201ENST00000516047 92 ntBASIC3.57□□□□□ -1.84
CNTNAP3Q9BZ76 RNU7-70P-201ENST00000516941 66 ntBASIC3.57□□□□□ -1.84
CNTNAP3Q9BZ76 MIR5680-201ENST00000577577 84 ntBASIC3.57□□□□□ -1.84
CNTNAP3Q9BZ76 MIR4435-1-201ENST00000582552 80 ntBASIC3.57□□□□□ -1.84
CNTNAP3Q9BZ76 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC3.57□□□□□ -1.84
CNTNAP3Q9BZ76 AC064859.1-201ENST00000624741 174 ntBASIC3.57□□□□□ -1.84
CNTNAP3Q9BZ76 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.57□□□□□ -1.84
CNTNAP3Q9BZ76 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
CNTNAP3Q9BZ76 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.57□□□□□ -1.84
CNTNAP3Q9BZ76 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.56□□□□□ -1.84
CNTNAP3Q9BZ76 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
CNTNAP3Q9BZ76 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CNTNAP3Q9BZ76 SNORD31B-201ENST00000364977 69 ntBASIC3.56□□□□□ -1.84
CNTNAP3Q9BZ76 SNORD58A-201ENST00000383875 65 ntBASIC3.56□□□□□ -1.84
CNTNAP3Q9BZ76 Y_RNA.440-201ENST00000384120 114 ntBASIC3.56□□□□□ -1.84
CNTNAP3Q9BZ76 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC3.56□□□□□ -1.84
CNTNAP3Q9BZ76 RPS23P4-201ENST00000487908 423 ntBASIC3.56□□□□□ -1.84
CNTNAP3Q9BZ76 MIR4474-201ENST00000579189 78 ntBASIC3.56□□□□□ -1.84
CNTNAP3Q9BZ76 AC087685.1-201ENST00000587507 141 ntBASIC3.56□□□□□ -1.84
CNTNAP3Q9BZ76 AC110741.2-201ENST00000605278 268 ntBASIC3.56□□□□□ -1.84
CNTNAP3Q9BZ76 AC095038.3-201ENST00000634439 195 ntBASIC3.56□□□□□ -1.84
CNTNAP3Q9BZ76 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CNTNAP3Q9BZ76 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CNTNAP3Q9BZ76 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.55□□□□□ -1.84
CNTNAP3Q9BZ76 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CNTNAP3Q9BZ76 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CNTNAP3Q9BZ76 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CNTNAP3Q9BZ76 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CNTNAP3Q9BZ76 RNA5SP322-201ENST00000363617 119 ntBASIC3.55□□□□□ -1.84
CNTNAP3Q9BZ76 RNU6-616P-201ENST00000384353 107 ntBASIC3.55□□□□□ -1.84
CNTNAP3Q9BZ76 MIR520G-201ENST00000385064 90 ntBASIC3.55□□□□□ -1.84
CNTNAP3Q9BZ76 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.55□□□□□ -1.84
CNTNAP3Q9BZ76 TRBV12-1-201ENST00000479785 344 ntBASIC3.55□□□□□ -1.84
CNTNAP3Q9BZ76 RPS29P21-201ENST00000496272 170 ntBASIC3.55□□□□□ -1.84
CNTNAP3Q9BZ76 HSPE1P19-201ENST00000603327 295 ntBASIC3.55□□□□□ -1.84
CNTNAP3Q9BZ76 AL359075.3-201ENST00000613288 217 ntBASIC3.55□□□□□ -1.84
CNTNAP3Q9BZ76 MIR7702-201ENST00000621931 59 ntBASIC3.55□□□□□ -1.84
CNTNAP3Q9BZ76 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.55□□□□□ -1.84
CNTNAP3Q9BZ76 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
CNTNAP3Q9BZ76 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
CNTNAP3Q9BZ76 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
CNTNAP3Q9BZ76 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
CNTNAP3Q9BZ76 AL353746.1-201ENST00000566293 6881 ntBASIC3.54□□□□□ -1.84
CNTNAP3Q9BZ76 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CNTNAP3Q9BZ76 SNORD9-201ENST00000362566 104 ntBASIC3.54□□□□□ -1.84
CNTNAP3Q9BZ76 Y_RNA.37-201ENST00000362606 108 ntBASIC3.54□□□□□ -1.84
CNTNAP3Q9BZ76 MIR548O-201ENST00000408583 114 ntBASIC3.54□□□□□ -1.84
CNTNAP3Q9BZ76 Y_RNA.621-201ENST00000411065 96 ntBASIC3.54□□□□□ -1.84
CNTNAP3Q9BZ76 AC107083.1-201ENST00000439643 279 ntBASIC3.54□□□□□ -1.84
CNTNAP3Q9BZ76 RNU6-711P-201ENST00000517255 106 ntBASIC3.54□□□□□ -1.84
CNTNAP3Q9BZ76 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
CNTNAP3Q9BZ76 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.54□□□□□ -1.84
CNTNAP3Q9BZ76 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
CNTNAP3Q9BZ76 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
CNTNAP3Q9BZ76 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.53□□□□□ -1.84
CNTNAP3Q9BZ76 SPATA31D2P-201ENST00000429999 4388 ntBASIC3.53□□□□□ -1.84
CNTNAP3Q9BZ76 ZNF271P-202ENST00000465539 1970 ntBASIC3.53□□□□□ -1.84
CNTNAP3Q9BZ76 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.53□□□□□ -1.84
CNTNAP3Q9BZ76 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.53□□□□□ -1.84
CNTNAP3Q9BZ76 RNA5SP139-201ENST00000364340 117 ntBASIC3.53□□□□□ -1.84
CNTNAP3Q9BZ76 Y_RNA.430-201ENST00000384081 110 ntBASIC3.53□□□□□ -1.84
CNTNAP3Q9BZ76 RNU6-1201P-201ENST00000384227 107 ntBASIC3.53□□□□□ -1.84
CNTNAP3Q9BZ76 RNU6-1274P-201ENST00000384557 107 ntBASIC3.53□□□□□ -1.84
CNTNAP3Q9BZ76 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
CNTNAP3Q9BZ76 AL138878.1-201ENST00000405131 347 ntBASIC3.53□□□□□ -1.84
CNTNAP3Q9BZ76 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.53□□□□□ -1.84
CNTNAP3Q9BZ76 TRBV25OR9-2-201ENST00000438417 374 ntBASIC3.53□□□□□ -1.84
CNTNAP3Q9BZ76 HMGN2P7-201ENST00000456186 273 ntBASIC3.53□□□□□ -1.84
CNTNAP3Q9BZ76 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC3.53□□□□□ -1.84
CNTNAP3Q9BZ76 RNU2-34P-201ENST00000516534 121 ntBASIC3.53□□□□□ -1.84
CNTNAP3Q9BZ76 SNORD36C-201ENST00000516733 66 ntBASIC3.53□□□□□ -1.84
CNTNAP3Q9BZ76 RNU7-143P-201ENST00000516781 65 ntBASIC3.53□□□□□ -1.84
CNTNAP3Q9BZ76 RNU6-586P-201ENST00000517265 104 ntBASIC3.53□□□□□ -1.84
CNTNAP3Q9BZ76 SCARNA11.3-201ENST00000517276 130 ntBASIC3.53□□□□□ -1.84
CNTNAP3Q9BZ76 MIR4425-201ENST00000580572 84 ntBASIC3.53□□□□□ -1.84
CNTNAP3Q9BZ76 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms