Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 SNORD13-201ENST00000459299 104 ntBASIC2.32□□□□□ -2.04
RTFDC1Q9BY42 AC107393.1-201ENST00000512403 346 ntBASIC2.32□□□□□ -2.04
RTFDC1Q9BY42 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC2.32□□□□□ -2.04
RTFDC1Q9BY42 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.32□□□□□ -2.04
RTFDC1Q9BY42 AC008269.2-201ENST00000561915 1105 ntBASIC2.32□□□□□ -2.04
RTFDC1Q9BY42 AC073413.2-201ENST00000604332 360 ntBASIC2.32□□□□□ -2.04
RTFDC1Q9BY42 AC010900.2-201ENST00000604508 210 ntBASIC2.32□□□□□ -2.04
RTFDC1Q9BY42 AL627230.6-201ENST00000611129 280 ntBASIC2.32□□□□□ -2.04
RTFDC1Q9BY42 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
RTFDC1Q9BY42 RNU4-13P-201ENST00000364019 141 ntBASIC2.31□□□□□ -2.04
RTFDC1Q9BY42 RNU6-326P-201ENST00000365480 107 ntBASIC2.31□□□□□ -2.04
RTFDC1Q9BY42 Y_RNA.456-201ENST00000384232 111 ntBASIC2.31□□□□□ -2.04
RTFDC1Q9BY42 Y_RNA.556-201ENST00000384677 113 ntBASIC2.31□□□□□ -2.04
RTFDC1Q9BY42 RNU6-855P-201ENST00000410395 104 ntBASIC2.31□□□□□ -2.04
RTFDC1Q9BY42 RNU6-121P-201ENST00000410525 99 ntBASIC2.31□□□□□ -2.04
RTFDC1Q9BY42 AL021397.1-201ENST00000451806 248 ntBASIC2.31□□□□□ -2.04
RTFDC1Q9BY42 HSPE1P25-201ENST00000455484 251 ntBASIC2.31□□□□□ -2.04
RTFDC1Q9BY42 RNU6-1337P-201ENST00000516525 95 ntBASIC2.31□□□□□ -2.04
RTFDC1Q9BY42 MIR514B-201ENST00000516774 80 ntBASIC2.31□□□□□ -2.04
RTFDC1Q9BY42 RNU2-31P-201ENST00000516954 155 ntBASIC2.31□□□□□ -2.04
RTFDC1Q9BY42 RNU7-128P-201ENST00000517247 62 ntBASIC2.31□□□□□ -2.04
RTFDC1Q9BY42 MIR4713-201ENST00000582691 75 ntBASIC2.31□□□□□ -2.04
RTFDC1Q9BY42 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
RTFDC1Q9BY42 MIR378A-201ENST00000362177 66 ntBASIC2.3□□□□□ -2.04
RTFDC1Q9BY42 SNORA25.1-201ENST00000362326 128 ntBASIC2.3□□□□□ -2.04
RTFDC1Q9BY42 RNU6-661P-201ENST00000362409 107 ntBASIC2.3□□□□□ -2.04
RTFDC1Q9BY42 RNU6-117P-201ENST00000365415 107 ntBASIC2.3□□□□□ -2.04
RTFDC1Q9BY42 AL627390.1-201ENST00000396055 340 ntBASIC2.3□□□□□ -2.04
RTFDC1Q9BY42 MIR1302-6-201ENST00000408466 90 ntBASIC2.3□□□□□ -2.04
RTFDC1Q9BY42 BTF3P4-201ENST00000418852 495 ntBASIC2.3□□□□□ -2.04
RTFDC1Q9BY42 AL358176.2-201ENST00000425769 204 ntBASIC2.3□□□□□ -2.04
RTFDC1Q9BY42 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC2.3□□□□□ -2.04
RTFDC1Q9BY42 MTATP8P1-201ENST00000467115 207 ntBASIC2.3□□□□□ -2.04
RTFDC1Q9BY42 HMGN1P10-201ENST00000474557 553 ntBASIC2.3□□□□□ -2.04
RTFDC1Q9BY42 RPS27P21-201ENST00000486977 252 ntBASIC2.3□□□□□ -2.04
RTFDC1Q9BY42 RNU6-250P-201ENST00000516958 103 ntBASIC2.3□□□□□ -2.04
RTFDC1Q9BY42 MIR4299-201ENST00000577899 72 ntBASIC2.3□□□□□ -2.04
RTFDC1Q9BY42 DEFB117-201ENST00000602356 141 ntBASIC2.3□□□□□ -2.04
RTFDC1Q9BY42 U6.108-201ENST00000637764 58 ntBASIC2.3□□□□□ -2.04
RTFDC1Q9BY42 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.29□□□□□ -2.04
RTFDC1Q9BY42 Y_RNA.64-201ENST00000362845 102 ntBASIC2.29□□□□□ -2.04
RTFDC1Q9BY42 Y_RNA.105-201ENST00000363182 111 ntBASIC2.29□□□□□ -2.04
RTFDC1Q9BY42 SNORA33-201ENST00000363664 130 ntBASIC2.29□□□□□ -2.04
RTFDC1Q9BY42 RNU4-52P-201ENST00000384209 138 ntBASIC2.29□□□□□ -2.04
RTFDC1Q9BY42 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC2.29□□□□□ -2.04
RTFDC1Q9BY42 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC2.29□□□□□ -2.04
RTFDC1Q9BY42 RPS29P11-201ENST00000496507 171 ntBASIC2.29□□□□□ -2.04
RTFDC1Q9BY42 MRPS17P9-201ENST00000511924 393 ntBASIC2.29□□□□□ -2.04
RTFDC1Q9BY42 AL358944.1-201ENST00000528537 144 ntBASIC2.29□□□□□ -2.04
RTFDC1Q9BY42 AL162424.1-201ENST00000602325 221 ntBASIC2.29□□□□□ -2.04
RTFDC1Q9BY42 AC084768.2-201ENST00000622736 221 ntBASIC2.29□□□□□ -2.04
RTFDC1Q9BY42 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.29□□□□□ -2.04
RTFDC1Q9BY42 MIR6079-201ENST00000635807 62 ntBASIC2.29□□□□□ -2.04
RTFDC1Q9BY42 WWP1P1-201ENST00000466609 2769 ntBASIC2.28□□□□□ -2.04
RTFDC1Q9BY42 AL359851.1-201ENST00000569460 4997 ntBASIC2.28□□□□□ -2.04
RTFDC1Q9BY42 RNU6-1309P-201ENST00000363305 108 ntBASIC2.28□□□□□ -2.04
RTFDC1Q9BY42 RNU6-238P-201ENST00000363313 106 ntBASIC2.28□□□□□ -2.04
RTFDC1Q9BY42 Y_RNA.286-201ENST00000364813 102 ntBASIC2.28□□□□□ -2.04
RTFDC1Q9BY42 Y_RNA.341-201ENST00000365341 102 ntBASIC2.28□□□□□ -2.04
RTFDC1Q9BY42 Y_RNA.368-201ENST00000365547 113 ntBASIC2.28□□□□□ -2.04
RTFDC1Q9BY42 RNU6-296P-201ENST00000384608 107 ntBASIC2.28□□□□□ -2.04
RTFDC1Q9BY42 RNU6-321P-201ENST00000410912 106 ntBASIC2.28□□□□□ -2.04
RTFDC1Q9BY42 AL356379.1-201ENST00000414105 126 ntBASIC2.28□□□□□ -2.04
RTFDC1Q9BY42 COX6CP10-201ENST00000416832 224 ntBASIC2.28□□□□□ -2.04
RTFDC1Q9BY42 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC2.28□□□□□ -2.04
RTFDC1Q9BY42 AL162725.1-201ENST00000435405 301 ntBASIC2.28□□□□□ -2.04
RTFDC1Q9BY42 AC025033.1-201ENST00000463883 194 ntBASIC2.28□□□□□ -2.04
RTFDC1Q9BY42 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC2.28□□□□□ -2.04
RTFDC1Q9BY42 TRBVB-201ENST00000477100 408 ntBASIC2.28□□□□□ -2.04
RTFDC1Q9BY42 MTCO2P24-201ENST00000515611 426 ntBASIC2.28□□□□□ -2.04
RTFDC1Q9BY42 RNU6-966P-201ENST00000516479 104 ntBASIC2.28□□□□□ -2.04
RTFDC1Q9BY42 SNORA25.15-201ENST00000516487 89 ntBASIC2.28□□□□□ -2.04
RTFDC1Q9BY42 RNU6-341P-201ENST00000516973 96 ntBASIC2.28□□□□□ -2.04
RTFDC1Q9BY42 SNORA44.1-201ENST00000517031 108 ntBASIC2.28□□□□□ -2.04
RTFDC1Q9BY42 AC002984.1-201ENST00000591692 448 ntBASIC2.28□□□□□ -2.04
RTFDC1Q9BY42 MIR8062-201ENST00000621515 85 ntBASIC2.28□□□□□ -2.04
RTFDC1Q9BY42 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.28□□□□□ -2.04
RTFDC1Q9BY42 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
RTFDC1Q9BY42 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC2.28□□□□□ -2.05
RTFDC1Q9BY42 snoU2_19.2-201ENST00000363024 80 ntBASIC2.27□□□□□ -2.05
RTFDC1Q9BY42 RNU6-102P-201ENST00000384485 104 ntBASIC2.27□□□□□ -2.05
RTFDC1Q9BY42 RNU6-1105P-201ENST00000384774 107 ntBASIC2.27□□□□□ -2.05
RTFDC1Q9BY42 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
RTFDC1Q9BY42 RNU6-360P-201ENST00000390944 104 ntBASIC2.27□□□□□ -2.05
RTFDC1Q9BY42 RN7SKP200-201ENST00000410564 320 ntBASIC2.27□□□□□ -2.05
RTFDC1Q9BY42 AP1B1P2-201ENST00000416196 106 ntBASIC2.27□□□□□ -2.05
RTFDC1Q9BY42 RPL21P38-201ENST00000418090 167 ntBASIC2.27□□□□□ -2.05
RTFDC1Q9BY42 AC245047.3-201ENST00000429428 127 ntBASIC2.27□□□□□ -2.05
RTFDC1Q9BY42 RNU7-116P-201ENST00000516940 62 ntBASIC2.27□□□□□ -2.05
RTFDC1Q9BY42 AC022254.1-201ENST00000567857 235 ntBASIC2.27□□□□□ -2.05
RTFDC1Q9BY42 AL512605.2-201ENST00000592972 256 ntBASIC2.27□□□□□ -2.05
RTFDC1Q9BY42 SNORA28-201ENST00000606769 126 ntBASIC2.27□□□□□ -2.05
RTFDC1Q9BY42 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
RTFDC1Q9BY42 Y_RNA.47-201ENST00000362697 108 ntBASIC2.26□□□□□ -2.05
RTFDC1Q9BY42 Y_RNA.84-201ENST00000363011 104 ntBASIC2.26□□□□□ -2.05
RTFDC1Q9BY42 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC2.26□□□□□ -2.05
RTFDC1Q9BY42 MIR1287-201ENST00000408492 90 ntBASIC2.26□□□□□ -2.05
RTFDC1Q9BY42 RNU6-1203P-201ENST00000410703 110 ntBASIC2.26□□□□□ -2.05
RTFDC1Q9BY42 RNU2-40P-201ENST00000410833 196 ntBASIC2.26□□□□□ -2.05
RTFDC1Q9BY42 RNU7-28P-201ENST00000516759 62 ntBASIC2.26□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms