Protein–RNA interactions for Protein: Q9BTX1

NDC1, Nucleoporin NDC1, humanhuman

Predictions only

Length 674 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1Q9BTX1 RNU4-13P-201ENST00000364019 141 ntBASIC2.49□□□□□ -2.01
NDC1Q9BTX1 SNORD56.5-201ENST00000364281 72 ntBASIC2.49□□□□□ -2.01
NDC1Q9BTX1 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC2.49□□□□□ -2.01
NDC1Q9BTX1 MIR569-201ENST00000385228 96 ntBASIC2.49□□□□□ -2.01
NDC1Q9BTX1 MIR1253-201ENST00000408273 105 ntBASIC2.49□□□□□ -2.01
NDC1Q9BTX1 MIR1278-201ENST00000408753 81 ntBASIC2.49□□□□□ -2.01
NDC1Q9BTX1 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.49□□□□□ -2.01
NDC1Q9BTX1 MIR4438-201ENST00000585271 93 ntBASIC2.49□□□□□ -2.01
NDC1Q9BTX1 DNAJC19P2-201ENST00000593340 302 ntBASIC2.49□□□□□ -2.01
NDC1Q9BTX1 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.49□□□□□ -2.01
NDC1Q9BTX1 MIR6817-201ENST00000615588 66 ntBASIC2.49□□□□□ -2.01
NDC1Q9BTX1 AC091895.1-201ENST00000624494 256 ntBASIC2.49□□□□□ -2.01
NDC1Q9BTX1 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.49□□□□□ -2.01
NDC1Q9BTX1 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.49□□□□□ -2.01
NDC1Q9BTX1 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
NDC1Q9BTX1 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
NDC1Q9BTX1 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
NDC1Q9BTX1 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.48□□□□□ -2.01
NDC1Q9BTX1 Y_RNA.99-201ENST00000363138 105 ntBASIC2.48□□□□□ -2.01
NDC1Q9BTX1 RNU1-22P-201ENST00000363334 158 ntBASIC2.48□□□□□ -2.01
NDC1Q9BTX1 RNU4-11P-201ENST00000365287 132 ntBASIC2.48□□□□□ -2.01
NDC1Q9BTX1 RNU6-728P-201ENST00000365375 104 ntBASIC2.48□□□□□ -2.01
NDC1Q9BTX1 EDDM3CP-201ENST00000415977 425 ntBASIC2.48□□□□□ -2.01
NDC1Q9BTX1 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.48□□□□□ -2.01
NDC1Q9BTX1 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC2.48□□□□□ -2.01
NDC1Q9BTX1 RNU6-1146P-201ENST00000516282 102 ntBASIC2.48□□□□□ -2.01
NDC1Q9BTX1 RNA5SP282-201ENST00000516355 108 ntBASIC2.48□□□□□ -2.01
NDC1Q9BTX1 MIR548X2-201ENST00000579776 100 ntBASIC2.48□□□□□ -2.01
NDC1Q9BTX1 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.48□□□□□ -2.01
NDC1Q9BTX1 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.48□□□□□ -2.01
NDC1Q9BTX1 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
NDC1Q9BTX1 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
NDC1Q9BTX1 RNU6-674P-201ENST00000363831 107 ntBASIC2.47□□□□□ -2.01
NDC1Q9BTX1 Y_RNA.337-201ENST00000365312 102 ntBASIC2.47□□□□□ -2.01
NDC1Q9BTX1 RNU6-643P-201ENST00000384018 107 ntBASIC2.47□□□□□ -2.01
NDC1Q9BTX1 RNU6-376P-201ENST00000384731 106 ntBASIC2.47□□□□□ -2.01
NDC1Q9BTX1 AL513328.1-201ENST00000446460 224 ntBASIC2.47□□□□□ -2.01
NDC1Q9BTX1 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.47□□□□□ -2.01
NDC1Q9BTX1 RNU7-26P-201ENST00000458980 63 ntBASIC2.47□□□□□ -2.01
NDC1Q9BTX1 TRBV12-1-201ENST00000479785 344 ntBASIC2.47□□□□□ -2.01
NDC1Q9BTX1 AC097462.1-201ENST00000514125 324 ntBASIC2.47□□□□□ -2.01
NDC1Q9BTX1 RNU7-172P-201ENST00000517125 64 ntBASIC2.47□□□□□ -2.01
NDC1Q9BTX1 U2.20-201ENST00000613956 192 ntBASIC2.47□□□□□ -2.01
NDC1Q9BTX1 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.47□□□□□ -2.01
NDC1Q9BTX1 RNU4-41P-201ENST00000364426 143 ntBASIC2.46□□□□□ -2.02
NDC1Q9BTX1 RNY3P5-201ENST00000384127 102 ntBASIC2.46□□□□□ -2.02
NDC1Q9BTX1 RNU6-160P-201ENST00000384591 107 ntBASIC2.46□□□□□ -2.02
NDC1Q9BTX1 Y_RNA.586-201ENST00000391146 98 ntBASIC2.46□□□□□ -2.02
NDC1Q9BTX1 SNORA26.7-201ENST00000391288 122 ntBASIC2.46□□□□□ -2.02
NDC1Q9BTX1 AC060773.1-201ENST00000421698 310 ntBASIC2.46□□□□□ -2.02
NDC1Q9BTX1 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.46□□□□□ -2.02
NDC1Q9BTX1 AC245102.2-201ENST00000448956 180 ntBASIC2.46□□□□□ -2.02
NDC1Q9BTX1 RNA5SP148-201ENST00000516527 94 ntBASIC2.46□□□□□ -2.02
NDC1Q9BTX1 AC004486.1-201ENST00000546846 233 ntBASIC2.46□□□□□ -2.02
NDC1Q9BTX1 AC091544.4-201ENST00000555268 342 ntBASIC2.46□□□□□ -2.02
NDC1Q9BTX1 AC026271.5-201ENST00000577873 130 ntBASIC2.46□□□□□ -2.02
NDC1Q9BTX1 MIR548AI-201ENST00000579940 88 ntBASIC2.46□□□□□ -2.02
NDC1Q9BTX1 MIR3670-2-201ENST00000582974 65 ntBASIC2.46□□□□□ -2.02
NDC1Q9BTX1 MIR3670-1-201ENST00000584160 65 ntBASIC2.46□□□□□ -2.02
NDC1Q9BTX1 MIR3670-3-201ENST00000584855 65 ntBASIC2.46□□□□□ -2.02
NDC1Q9BTX1 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.46□□□□□ -2.02
NDC1Q9BTX1 MIR3670-4-201ENST00000612260 65 ntBASIC2.46□□□□□ -2.02
NDC1Q9BTX1 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
NDC1Q9BTX1 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.46□□□□□ -2.02
NDC1Q9BTX1 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
NDC1Q9BTX1 ZNF702P-202ENST00000434269 1966 ntBASIC2.45□□□□□ -2.02
NDC1Q9BTX1 SNORA72-201ENST00000384339 132 ntBASIC2.45□□□□□ -2.02
NDC1Q9BTX1 RNU6-1117P-201ENST00000384525 104 ntBASIC2.45□□□□□ -2.02
NDC1Q9BTX1 RNU6-959P-201ENST00000384671 107 ntBASIC2.45□□□□□ -2.02
NDC1Q9BTX1 RNU6-1072P-201ENST00000384703 107 ntBASIC2.45□□□□□ -2.02
NDC1Q9BTX1 RNU6-443P-201ENST00000384780 107 ntBASIC2.45□□□□□ -2.02
NDC1Q9BTX1 Y_RNA.587-201ENST00000391210 103 ntBASIC2.45□□□□□ -2.02
NDC1Q9BTX1 RNU6-257P-201ENST00000410238 98 ntBASIC2.45□□□□□ -2.02
NDC1Q9BTX1 Y_RNA.622-201ENST00000411091 108 ntBASIC2.45□□□□□ -2.02
NDC1Q9BTX1 RN7SKP101-201ENST00000411376 320 ntBASIC2.45□□□□□ -2.02
NDC1Q9BTX1 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.45□□□□□ -2.02
NDC1Q9BTX1 HMGN2P34-201ENST00000437647 269 ntBASIC2.45□□□□□ -2.02
NDC1Q9BTX1 RPS4XP11-201ENST00000446897 772 ntBASIC2.45□□□□□ -2.02
NDC1Q9BTX1 SNRPGP8-201ENST00000454064 226 ntBASIC2.45□□□□□ -2.02
NDC1Q9BTX1 AC008413.1-201ENST00000511864 177 ntBASIC2.45□□□□□ -2.02
NDC1Q9BTX1 AC011406.1-201ENST00000512440 370 ntBASIC2.45□□□□□ -2.02
NDC1Q9BTX1 SNORA25.12-201ENST00000516202 82 ntBASIC2.45□□□□□ -2.02
NDC1Q9BTX1 AC104984.5-201ENST00000586878 94 ntBASIC2.45□□□□□ -2.02
NDC1Q9BTX1 AL929325.1-201ENST00000603096 117 ntBASIC2.45□□□□□ -2.02
NDC1Q9BTX1 U6.73-201ENST00000619194 103 ntBASIC2.45□□□□□ -2.02
NDC1Q9BTX1 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
NDC1Q9BTX1 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
NDC1Q9BTX1 AC100821.1-201ENST00000523153 2479 ntBASIC2.45□□□□□ -2.02
NDC1Q9BTX1 AC080100.1-201ENST00000624239 5356 ntBASIC2.44□□□□□ -2.02
NDC1Q9BTX1 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
NDC1Q9BTX1 SNORA38-201ENST00000363946 132 ntBASIC2.44□□□□□ -2.02
NDC1Q9BTX1 RNA5SP496-201ENST00000391240 109 ntBASIC2.44□□□□□ -2.02
NDC1Q9BTX1 MIR1262-201ENST00000408276 93 ntBASIC2.44□□□□□ -2.02
NDC1Q9BTX1 RNU4-43P-201ENST00000410628 137 ntBASIC2.44□□□□□ -2.02
NDC1Q9BTX1 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.44□□□□□ -2.02
NDC1Q9BTX1 RNU1-131P-201ENST00000458943 161 ntBASIC2.44□□□□□ -2.02
NDC1Q9BTX1 CYCSP26-201ENST00000534107 320 ntBASIC2.44□□□□□ -2.02
NDC1Q9BTX1 AL031274.2-201ENST00000599419 203 ntBASIC2.44□□□□□ -2.02
NDC1Q9BTX1 MIR6715A-201ENST00000615929 79 ntBASIC2.44□□□□□ -2.02
NDC1Q9BTX1 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 119.8 ms