Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 AL358944.1-201ENST00000528537 144 ntBASIC1.22□□□□□ -2.21
RAB40CQ96S21 AL161670.1-201ENST00000554348 137 ntBASIC1.22□□□□□ -2.21
RAB40CQ96S21 AC015720.1-201ENST00000565251 277 ntBASIC1.22□□□□□ -2.21
RAB40CQ96S21 MIR4778-201ENST00000577635 80 ntBASIC1.22□□□□□ -2.21
RAB40CQ96S21 AL121655.1-201ENST00000605811 308 ntBASIC1.22□□□□□ -2.21
RAB40CQ96S21 AC106754.2-201ENST00000623006 233 ntBASIC1.22□□□□□ -2.21
RAB40CQ96S21 AC005592.1-201ENST00000566527 1640 ntBASIC1.22□□□□□ -2.21
RAB40CQ96S21 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.22□□□□□ -2.21
RAB40CQ96S21 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.21□□□□□ -2.22
RAB40CQ96S21 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.21□□□□□ -2.22
RAB40CQ96S21 Y_RNA.112-201ENST00000363250 102 ntBASIC1.21□□□□□ -2.22
RAB40CQ96S21 RNU4-13P-201ENST00000364019 141 ntBASIC1.21□□□□□ -2.22
RAB40CQ96S21 RNU4-76P-201ENST00000364509 141 ntBASIC1.21□□□□□ -2.22
RAB40CQ96S21 Y_RNA.458-201ENST00000384240 102 ntBASIC1.21□□□□□ -2.22
RAB40CQ96S21 Y_RNA.526-201ENST00000384572 110 ntBASIC1.21□□□□□ -2.22
RAB40CQ96S21 RNU2-61P-201ENST00000411069 191 ntBASIC1.21□□□□□ -2.22
RAB40CQ96S21 RPEP5-201ENST00000441137 268 ntBASIC1.21□□□□□ -2.22
RAB40CQ96S21 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC1.21□□□□□ -2.22
RAB40CQ96S21 AL512310.8-201ENST00000550183 120 ntBASIC1.21□□□□□ -2.22
RAB40CQ96S21 AL160236.1-201ENST00000556317 195 ntBASIC1.21□□□□□ -2.22
RAB40CQ96S21 MIR7974-201ENST00000615835 79 ntBASIC1.21□□□□□ -2.22
RAB40CQ96S21 uc_338.22-201ENST00000622722 187 ntBASIC1.21□□□□□ -2.22
RAB40CQ96S21 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
RAB40CQ96S21 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.21□□□□□ -2.22
RAB40CQ96S21 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
RAB40CQ96S21 MIR369-201ENST00000362155 70 ntBASIC1.2□□□□□ -2.22
RAB40CQ96S21 RNU5E-4P-201ENST00000364931 120 ntBASIC1.2□□□□□ -2.22
RAB40CQ96S21 SNORD116-13-201ENST00000384408 92 ntBASIC1.2□□□□□ -2.22
RAB40CQ96S21 Y_RNA.509-201ENST00000384506 99 ntBASIC1.2□□□□□ -2.22
RAB40CQ96S21 MIR517C-201ENST00000385103 95 ntBASIC1.2□□□□□ -2.22
RAB40CQ96S21 U8.16-201ENST00000391279 133 ntBASIC1.2□□□□□ -2.22
RAB40CQ96S21 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.2□□□□□ -2.22
RAB40CQ96S21 AC005042.3-201ENST00000453230 174 ntBASIC1.2□□□□□ -2.22
RAB40CQ96S21 RPL39P38-201ENST00000467018 153 ntBASIC1.2□□□□□ -2.22
RAB40CQ96S21 AC092991.1-201ENST00000477176 376 ntBASIC1.2□□□□□ -2.22
RAB40CQ96S21 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC1.2□□□□□ -2.22
RAB40CQ96S21 MIR3683-201ENST00000580847 82 ntBASIC1.2□□□□□ -2.22
RAB40CQ96S21 MIR4423-201ENST00000580922 80 ntBASIC1.2□□□□□ -2.22
RAB40CQ96S21 MIR4769-201ENST00000584126 77 ntBASIC1.2□□□□□ -2.22
RAB40CQ96S21 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC1.2□□□□□ -2.22
RAB40CQ96S21 AC007485.1-201ENST00000616755 206 ntBASIC1.2□□□□□ -2.22
RAB40CQ96S21 MIR8065-201ENST00000620577 100 ntBASIC1.2□□□□□ -2.22
RAB40CQ96S21 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
RAB40CQ96S21 RNU6-199P-201ENST00000362954 107 ntBASIC1.19□□□□□ -2.22
RAB40CQ96S21 SNORA25.8-201ENST00000364831 128 ntBASIC1.19□□□□□ -2.22
RAB40CQ96S21 RNU6-867P-201ENST00000364956 107 ntBASIC1.19□□□□□ -2.22
RAB40CQ96S21 Y_RNA.329-201ENST00000365209 107 ntBASIC1.19□□□□□ -2.22
RAB40CQ96S21 Y_RNA.331-201ENST00000365267 102 ntBASIC1.19□□□□□ -2.22
RAB40CQ96S21 Y_RNA.395-201ENST00000383945 109 ntBASIC1.19□□□□□ -2.22
RAB40CQ96S21 Y_RNA.621-201ENST00000411065 96 ntBASIC1.19□□□□□ -2.22
RAB40CQ96S21 AL390729.2-201ENST00000416137 156 ntBASIC1.19□□□□□ -2.22
RAB40CQ96S21 RPS4XP11-201ENST00000446897 772 ntBASIC1.19□□□□□ -2.22
RAB40CQ96S21 RNU6-475P-201ENST00000516073 104 ntBASIC1.19□□□□□ -2.22
RAB40CQ96S21 AC019288.1-201ENST00000557918 224 ntBASIC1.19□□□□□ -2.22
RAB40CQ96S21 CYP3A52P-201ENST00000563326 91 ntBASIC1.19□□□□□ -2.22
RAB40CQ96S21 AL050343.2-201ENST00000607338 280 ntBASIC1.19□□□□□ -2.22
RAB40CQ96S21 AC004832.4-201ENST00000608952 331 ntBASIC1.19□□□□□ -2.22
RAB40CQ96S21 AC090971.5-201ENST00000621102 293 ntBASIC1.19□□□□□ -2.22
RAB40CQ96S21 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
RAB40CQ96S21 Y_RNA.172-201ENST00000363765 102 ntBASIC1.18□□□□□ -2.22
RAB40CQ96S21 RNU4-50P-201ENST00000364361 141 ntBASIC1.18□□□□□ -2.22
RAB40CQ96S21 RNU4-41P-201ENST00000364426 143 ntBASIC1.18□□□□□ -2.22
RAB40CQ96S21 RNA5SP190-201ENST00000365222 118 ntBASIC1.18□□□□□ -2.22
RAB40CQ96S21 SNORD42.2-201ENST00000365570 69 ntBASIC1.18□□□□□ -2.22
RAB40CQ96S21 Y_RNA.439-201ENST00000384119 94 ntBASIC1.18□□□□□ -2.22
RAB40CQ96S21 Y_RNA.462-201ENST00000384268 102 ntBASIC1.18□□□□□ -2.22
RAB40CQ96S21 Y_RNA.471-201ENST00000384312 102 ntBASIC1.18□□□□□ -2.22
RAB40CQ96S21 RPL23AP36-201ENST00000413895 458 ntBASIC1.18□□□□□ -2.22
RAB40CQ96S21 MCFD2P1-201ENST00000417812 300 ntBASIC1.18□□□□□ -2.22
RAB40CQ96S21 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC1.18□□□□□ -2.22
RAB40CQ96S21 U8.20-201ENST00000459445 131 ntBASIC1.18□□□□□ -2.22
RAB40CQ96S21 AC093852.1-201ENST00000503587 266 ntBASIC1.18□□□□□ -2.22
RAB40CQ96S21 RNU7-12P-201ENST00000516030 62 ntBASIC1.18□□□□□ -2.22
RAB40CQ96S21 RNU7-110P-201ENST00000516891 62 ntBASIC1.18□□□□□ -2.22
RAB40CQ96S21 Y_RNA.713-201ENST00000517013 96 ntBASIC1.18□□□□□ -2.22
RAB40CQ96S21 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.18□□□□□ -2.22
RAB40CQ96S21 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
RAB40CQ96S21 AC040926.1-201ENST00000530195 238 ntBASIC1.18□□□□□ -2.22
RAB40CQ96S21 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.18□□□□□ -2.22
RAB40CQ96S21 AC091812.1-201ENST00000432235 1948 ntBASIC1.17□□□□□ -2.22
RAB40CQ96S21 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
RAB40CQ96S21 SNORD14.1-201ENST00000365609 90 ntBASIC1.17□□□□□ -2.22
RAB40CQ96S21 RNU6-1080P-201ENST00000383982 107 ntBASIC1.17□□□□□ -2.22
RAB40CQ96S21 Y_RNA.445-201ENST00000384168 102 ntBASIC1.17□□□□□ -2.22
RAB40CQ96S21 MIR150-201ENST00000385048 84 ntBASIC1.17□□□□□ -2.22
RAB40CQ96S21 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
RAB40CQ96S21 RNU6-308P-201ENST00000390957 107 ntBASIC1.17□□□□□ -2.22
RAB40CQ96S21 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.17□□□□□ -2.22
RAB40CQ96S21 MIR1302-11-201ENST00000408051 138 ntBASIC1.17□□□□□ -2.22
RAB40CQ96S21 MIR1302-9-201ENST00000408365 138 ntBASIC1.17□□□□□ -2.22
RAB40CQ96S21 MIR1302-10-201ENST00000408734 138 ntBASIC1.17□□□□□ -2.22
RAB40CQ96S21 Z98949.2-201ENST00000440996 144 ntBASIC1.17□□□□□ -2.22
RAB40CQ96S21 Y_RNA.639-201ENST00000458981 102 ntBASIC1.17□□□□□ -2.22
RAB40CQ96S21 RNU6-922P-201ENST00000516753 99 ntBASIC1.17□□□□□ -2.22
RAB40CQ96S21 RN7SKP88-201ENST00000516847 250 ntBASIC1.17□□□□□ -2.22
RAB40CQ96S21 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.17□□□□□ -2.22
RAB40CQ96S21 AC011604.1-201ENST00000545978 196 ntBASIC1.17□□□□□ -2.22
RAB40CQ96S21 MIR3664-201ENST00000579074 99 ntBASIC1.17□□□□□ -2.22
RAB40CQ96S21 C8orf59P2-201ENST00000603441 271 ntBASIC1.17□□□□□ -2.22
RAB40CQ96S21 MIR1302-2-201ENST00000607096 138 ntBASIC1.17□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 170.6 ms