Protein–RNA interactions for Protein: Q8N4M1

SLC44A3, Choline transporter-like protein 3, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A3Q8N4M1 AC010598.1-201ENST00000510378 103 ntBASIC2.48□□□□□ -2.01
SLC44A3Q8N4M1 AC127455.1-201ENST00000565496 145 ntBASIC2.48□□□□□ -2.01
SLC44A3Q8N4M1 AC105245.1-201ENST00000581934 244 ntBASIC2.48□□□□□ -2.01
SLC44A3Q8N4M1 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.48□□□□□ -2.01
SLC44A3Q8N4M1 MIR1248-201ENST00000629190 106 ntBASIC2.48□□□□□ -2.01
SLC44A3Q8N4M1 MIR7157-201ENST00000635801 60 ntBASIC2.48□□□□□ -2.01
SLC44A3Q8N4M1 MIR3658-201ENST00000636291 56 ntBASIC2.48□□□□□ -2.01
SLC44A3Q8N4M1 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.48□□□□□ -2.01
SLC44A3Q8N4M1 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.48□□□□□ -2.01
SLC44A3Q8N4M1 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.48□□□□□ -2.01
SLC44A3Q8N4M1 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
SLC44A3Q8N4M1 RNU6-151P-201ENST00000364158 107 ntBASIC2.47□□□□□ -2.01
SLC44A3Q8N4M1 RNU6-117P-201ENST00000365415 107 ntBASIC2.47□□□□□ -2.01
SLC44A3Q8N4M1 RNU6-1323P-201ENST00000384025 107 ntBASIC2.47□□□□□ -2.01
SLC44A3Q8N4M1 MIR627-201ENST00000384979 97 ntBASIC2.47□□□□□ -2.01
SLC44A3Q8N4M1 MT-TT-201ENST00000387460 66 ntBASIC2.47□□□□□ -2.01
SLC44A3Q8N4M1 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.47□□□□□ -2.01
SLC44A3Q8N4M1 RNU6-57P-201ENST00000411348 103 ntBASIC2.47□□□□□ -2.01
SLC44A3Q8N4M1 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.47□□□□□ -2.01
SLC44A3Q8N4M1 AC090515.1-201ENST00000465295 476 ntBASIC2.47□□□□□ -2.01
SLC44A3Q8N4M1 AC117454.1-201ENST00000491120 168 ntBASIC2.47□□□□□ -2.01
SLC44A3Q8N4M1 AC107027.2-201ENST00000512197 115 ntBASIC2.47□□□□□ -2.01
SLC44A3Q8N4M1 RNU6-1007P-201ENST00000516586 107 ntBASIC2.47□□□□□ -2.01
SLC44A3Q8N4M1 SCARNA3-201ENST00000517097 143 ntBASIC2.47□□□□□ -2.01
SLC44A3Q8N4M1 AC025647.1-201ENST00000517879 253 ntBASIC2.47□□□□□ -2.01
SLC44A3Q8N4M1 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC2.47□□□□□ -2.01
SLC44A3Q8N4M1 AC022616.8-201ENST00000533569 253 ntBASIC2.47□□□□□ -2.01
SLC44A3Q8N4M1 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC2.47□□□□□ -2.01
SLC44A3Q8N4M1 MIR1291-201ENST00000627649 87 ntBASIC2.47□□□□□ -2.01
SLC44A3Q8N4M1 AC068647.2-201ENST00000637380 353 ntBASIC2.47□□□□□ -2.01
SLC44A3Q8N4M1 MIR7515-201ENST00000637837 67 ntBASIC2.47□□□□□ -2.01
SLC44A3Q8N4M1 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.47□□□□□ -2.01
SLC44A3Q8N4M1 AC016717.2-201ENST00000609089 5141 ntBASIC2.47□□□□□ -2.01
SLC44A3Q8N4M1 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.46□□□□□ -2.01
SLC44A3Q8N4M1 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
SLC44A3Q8N4M1 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.46□□□□□ -2.02
SLC44A3Q8N4M1 RNU6-271P-201ENST00000363858 105 ntBASIC2.46□□□□□ -2.02
SLC44A3Q8N4M1 RNU6-1117P-201ENST00000384525 104 ntBASIC2.46□□□□□ -2.02
SLC44A3Q8N4M1 RNU6-1235P-201ENST00000384559 107 ntBASIC2.46□□□□□ -2.02
SLC44A3Q8N4M1 RNU6-257P-201ENST00000410238 98 ntBASIC2.46□□□□□ -2.02
SLC44A3Q8N4M1 RNU6-383P-201ENST00000410864 94 ntBASIC2.46□□□□□ -2.02
SLC44A3Q8N4M1 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC2.46□□□□□ -2.02
SLC44A3Q8N4M1 AC074290.1-201ENST00000448883 135 ntBASIC2.46□□□□□ -2.02
SLC44A3Q8N4M1 RNU6-498P-201ENST00000459468 107 ntBASIC2.46□□□□□ -2.02
SLC44A3Q8N4M1 AC010531.2-201ENST00000465012 153 ntBASIC2.46□□□□□ -2.02
SLC44A3Q8N4M1 AC010409.1-201ENST00000487382 476 ntBASIC2.46□□□□□ -2.02
SLC44A3Q8N4M1 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.46□□□□□ -2.02
SLC44A3Q8N4M1 RNU6-561P-201ENST00000516222 102 ntBASIC2.46□□□□□ -2.02
SLC44A3Q8N4M1 PRELID2P1-201ENST00000552837 301 ntBASIC2.46□□□□□ -2.02
SLC44A3Q8N4M1 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.46□□□□□ -2.02
SLC44A3Q8N4M1 MIR4724-201ENST00000579485 89 ntBASIC2.46□□□□□ -2.02
SLC44A3Q8N4M1 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.46□□□□□ -2.02
SLC44A3Q8N4M1 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
SLC44A3Q8N4M1 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.46□□□□□ -2.02
SLC44A3Q8N4M1 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.46□□□□□ -2.02
SLC44A3Q8N4M1 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.45□□□□□ -2.02
SLC44A3Q8N4M1 AC080128.1-201ENST00000474389 1917 ntBASIC2.45□□□□□ -2.02
SLC44A3Q8N4M1 AL356292.1-201ENST00000283110 373 ntBASIC2.45□□□□□ -2.02
SLC44A3Q8N4M1 RNU6-22P-201ENST00000384355 107 ntBASIC2.45□□□□□ -2.02
SLC44A3Q8N4M1 RNU6-1081P-201ENST00000384537 107 ntBASIC2.45□□□□□ -2.02
SLC44A3Q8N4M1 SNORA36B-201ENST00000410438 131 ntBASIC2.45□□□□□ -2.02
SLC44A3Q8N4M1 RNU2-48P-201ENST00000410694 191 ntBASIC2.45□□□□□ -2.02
SLC44A3Q8N4M1 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.45□□□□□ -2.02
SLC44A3Q8N4M1 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC2.45□□□□□ -2.02
SLC44A3Q8N4M1 AC080013.2-201ENST00000460866 323 ntBASIC2.45□□□□□ -2.02
SLC44A3Q8N4M1 RNA5SP272-201ENST00000516095 111 ntBASIC2.45□□□□□ -2.02
SLC44A3Q8N4M1 SNORA31.15-201ENST00000516771 132 ntBASIC2.45□□□□□ -2.02
SLC44A3Q8N4M1 MIR548X2-201ENST00000579776 100 ntBASIC2.45□□□□□ -2.02
SLC44A3Q8N4M1 MIR548AI-201ENST00000579940 88 ntBASIC2.45□□□□□ -2.02
SLC44A3Q8N4M1 MIR3199-1-201ENST00000582434 88 ntBASIC2.45□□□□□ -2.02
SLC44A3Q8N4M1 DNAJC19P2-201ENST00000593340 302 ntBASIC2.45□□□□□ -2.02
SLC44A3Q8N4M1 AL021707.8-201ENST00000609428 183 ntBASIC2.45□□□□□ -2.02
SLC44A3Q8N4M1 MIR6873-201ENST00000622788 63 ntBASIC2.45□□□□□ -2.02
SLC44A3Q8N4M1 AC006435.5-201ENST00000624486 112 ntBASIC2.45□□□□□ -2.02
SLC44A3Q8N4M1 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.44□□□□□ -2.02
SLC44A3Q8N4M1 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
SLC44A3Q8N4M1 MIR367-201ENST00000362299 68 ntBASIC2.44□□□□□ -2.02
SLC44A3Q8N4M1 RNU6-643P-201ENST00000384018 107 ntBASIC2.44□□□□□ -2.02
SLC44A3Q8N4M1 RNU6-418P-201ENST00000384035 107 ntBASIC2.44□□□□□ -2.02
SLC44A3Q8N4M1 MIR218-1-201ENST00000384999 110 ntBASIC2.44□□□□□ -2.02
SLC44A3Q8N4M1 MIR15B-201ENST00000385045 98 ntBASIC2.44□□□□□ -2.02
SLC44A3Q8N4M1 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
SLC44A3Q8N4M1 RNU6-1228P-201ENST00000391014 107 ntBASIC2.44□□□□□ -2.02
SLC44A3Q8N4M1 AL606845.1-201ENST00000404881 255 ntBASIC2.44□□□□□ -2.02
SLC44A3Q8N4M1 RNU2-51P-201ENST00000410708 197 ntBASIC2.44□□□□□ -2.02
SLC44A3Q8N4M1 AC092427.1-202ENST00000430569 476 ntBASIC2.44□□□□□ -2.02
SLC44A3Q8N4M1 HSPE1P21-201ENST00000438283 308 ntBASIC2.44□□□□□ -2.02
SLC44A3Q8N4M1 MTCO1P44-201ENST00000441935 243 ntBASIC2.44□□□□□ -2.02
SLC44A3Q8N4M1 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.44□□□□□ -2.02
SLC44A3Q8N4M1 RNA5SP20-201ENST00000515976 84 ntBASIC2.44□□□□□ -2.02
SLC44A3Q8N4M1 RNU6-479P-201ENST00000516348 105 ntBASIC2.44□□□□□ -2.02
SLC44A3Q8N4M1 RNU6-965P-201ENST00000516721 96 ntBASIC2.44□□□□□ -2.02
SLC44A3Q8N4M1 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.44□□□□□ -2.02
SLC44A3Q8N4M1 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.44□□□□□ -2.02
SLC44A3Q8N4M1 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC2.44□□□□□ -2.02
SLC44A3Q8N4M1 MIR5092-201ENST00000583139 88 ntBASIC2.44□□□□□ -2.02
SLC44A3Q8N4M1 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.44□□□□□ -2.02
SLC44A3Q8N4M1 AL353997.5-201ENST00000618886 171 ntBASIC2.44□□□□□ -2.02
SLC44A3Q8N4M1 5S_rRNA.13-201ENST00000622298 123 ntBASIC2.44□□□□□ -2.02
SLC44A3Q8N4M1 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 169.6 ms