Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
SCUBE3Q8IX30 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
SCUBE3Q8IX30 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
SCUBE3Q8IX30 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
SCUBE3Q8IX30 SNORA1B-201ENST00000362535 133 ntBASIC3.85□□□□□ -1.79
SCUBE3Q8IX30 SNORD68-201ENST00000363214 84 ntBASIC3.85□□□□□ -1.79
SCUBE3Q8IX30 RNU4-67P-201ENST00000364569 141 ntBASIC3.85□□□□□ -1.79
SCUBE3Q8IX30 RNU1-89P-201ENST00000384592 164 ntBASIC3.85□□□□□ -1.79
SCUBE3Q8IX30 MIR605-201ENST00000385078 83 ntBASIC3.85□□□□□ -1.79
SCUBE3Q8IX30 AL627390.1-201ENST00000396055 340 ntBASIC3.85□□□□□ -1.79
SCUBE3Q8IX30 BTF3P4-201ENST00000418852 495 ntBASIC3.85□□□□□ -1.79
SCUBE3Q8IX30 AL159169.1-201ENST00000421119 127 ntBASIC3.85□□□□□ -1.79
SCUBE3Q8IX30 RN7SL93P-201ENST00000463035 293 ntBASIC3.85□□□□□ -1.79
SCUBE3Q8IX30 RN7SL293P-201ENST00000481765 281 ntBASIC3.85□□□□□ -1.79
SCUBE3Q8IX30 IGHVII-40-1-201ENST00000517316 58 ntBASIC3.85□□□□□ -1.79
SCUBE3Q8IX30 MIR4777-201ENST00000583710 86 ntBASIC3.85□□□□□ -1.79
SCUBE3Q8IX30 MIR4762-201ENST00000585261 75 ntBASIC3.85□□□□□ -1.79
SCUBE3Q8IX30 AC078899.2-201ENST00000595282 212 ntBASIC3.85□□□□□ -1.79
SCUBE3Q8IX30 Y_RNA.773-201ENST00000607168 90 ntBASIC3.85□□□□□ -1.79
SCUBE3Q8IX30 MIR1255B1-201ENST00000636325 63 ntBASIC3.85□□□□□ -1.79
SCUBE3Q8IX30 MIR4662A-201ENST00000637499 67 ntBASIC3.85□□□□□ -1.79
SCUBE3Q8IX30 U6.108-201ENST00000637764 58 ntBASIC3.85□□□□□ -1.79
SCUBE3Q8IX30 AP000553.6-201ENST00000641242 118 ntBASIC3.85□□□□□ -1.79
SCUBE3Q8IX30 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC3.85□□□□□ -1.79
SCUBE3Q8IX30 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.84□□□□□ -1.79
SCUBE3Q8IX30 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.84□□□□□ -1.79
SCUBE3Q8IX30 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
SCUBE3Q8IX30 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
SCUBE3Q8IX30 MIR340-201ENST00000362125 95 ntBASIC3.84□□□□□ -1.79
SCUBE3Q8IX30 snoU2-30.1-201ENST00000365012 70 ntBASIC3.84□□□□□ -1.79
SCUBE3Q8IX30 AC073261.1-201ENST00000429409 121 ntBASIC3.84□□□□□ -1.79
SCUBE3Q8IX30 AC107083.1-201ENST00000439643 279 ntBASIC3.84□□□□□ -1.79
SCUBE3Q8IX30 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC3.84□□□□□ -1.79
SCUBE3Q8IX30 RPS23P4-201ENST00000487908 423 ntBASIC3.84□□□□□ -1.79
SCUBE3Q8IX30 SCARNA17.1-201ENST00000516211 143 ntBASIC3.84□□□□□ -1.79
SCUBE3Q8IX30 SCARNA17.2-201ENST00000516334 143 ntBASIC3.84□□□□□ -1.79
SCUBE3Q8IX30 RN7SKP83-201ENST00000516512 178 ntBASIC3.84□□□□□ -1.79
SCUBE3Q8IX30 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.84□□□□□ -1.79
SCUBE3Q8IX30 SCARNA17.4-201ENST00000614296 143 ntBASIC3.84□□□□□ -1.79
SCUBE3Q8IX30 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
SCUBE3Q8IX30 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.84□□□□□ -1.8
SCUBE3Q8IX30 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.8
SCUBE3Q8IX30 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.8
SCUBE3Q8IX30 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
SCUBE3Q8IX30 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
SCUBE3Q8IX30 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
SCUBE3Q8IX30 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
SCUBE3Q8IX30 RNU4-16P-201ENST00000364737 141 ntBASIC3.83□□□□□ -1.8
SCUBE3Q8IX30 SNORD115-35-201ENST00000365122 82 ntBASIC3.83□□□□□ -1.8
SCUBE3Q8IX30 SNORD6-201ENST00000365444 73 ntBASIC3.83□□□□□ -1.8
SCUBE3Q8IX30 RNVU1-14-201ENST00000384770 164 ntBASIC3.83□□□□□ -1.8
SCUBE3Q8IX30 RN7SKP200-201ENST00000410564 320 ntBASIC3.83□□□□□ -1.8
SCUBE3Q8IX30 RNU6-267P-201ENST00000516714 103 ntBASIC3.83□□□□□ -1.8
SCUBE3Q8IX30 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC3.83□□□□□ -1.8
SCUBE3Q8IX30 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
SCUBE3Q8IX30 AC064859.1-201ENST00000624741 174 ntBASIC3.83□□□□□ -1.8
SCUBE3Q8IX30 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.83□□□□□ -1.8
SCUBE3Q8IX30 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
SCUBE3Q8IX30 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
SCUBE3Q8IX30 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
SCUBE3Q8IX30 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.82□□□□□ -1.8
SCUBE3Q8IX30 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
SCUBE3Q8IX30 MIR423-201ENST00000362201 94 ntBASIC3.82□□□□□ -1.8
SCUBE3Q8IX30 MIR342-201ENST00000362212 99 ntBASIC3.82□□□□□ -1.8
SCUBE3Q8IX30 RNA5SP322-201ENST00000363617 119 ntBASIC3.82□□□□□ -1.8
SCUBE3Q8IX30 SNORD45B-201ENST00000364617 72 ntBASIC3.82□□□□□ -1.8
SCUBE3Q8IX30 AC009414.1-201ENST00000427200 443 ntBASIC3.82□□□□□ -1.8
SCUBE3Q8IX30 RNU7-170P-201ENST00000459303 61 ntBASIC3.82□□□□□ -1.8
SCUBE3Q8IX30 RNU7-94P-201ENST00000459576 63 ntBASIC3.82□□□□□ -1.8
SCUBE3Q8IX30 AC004812.1-201ENST00000540773 146 ntBASIC3.82□□□□□ -1.8
SCUBE3Q8IX30 AC002984.1-201ENST00000591692 448 ntBASIC3.82□□□□□ -1.8
SCUBE3Q8IX30 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC3.82□□□□□ -1.8
SCUBE3Q8IX30 MIR338-201ENST00000636369 67 ntBASIC3.82□□□□□ -1.8
SCUBE3Q8IX30 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
SCUBE3Q8IX30 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.82□□□□□ -1.8
SCUBE3Q8IX30 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
SCUBE3Q8IX30 MAPK10-373ENST00000641983 6772 ntBASIC3.81□□□□□ -1.8
SCUBE3Q8IX30 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SCUBE3Q8IX30 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SCUBE3Q8IX30 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SCUBE3Q8IX30 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
SCUBE3Q8IX30 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
SCUBE3Q8IX30 RNU1-18P-201ENST00000363062 164 ntBASIC3.81□□□□□ -1.8
SCUBE3Q8IX30 U8.5-201ENST00000364528 136 ntBASIC3.81□□□□□ -1.8
SCUBE3Q8IX30 Y_RNA.336-201ENST00000365307 109 ntBASIC3.81□□□□□ -1.8
SCUBE3Q8IX30 Z98941.1-201ENST00000407764 100 ntBASIC3.81□□□□□ -1.8
SCUBE3Q8IX30 RNA5SP144-201ENST00000410846 116 ntBASIC3.81□□□□□ -1.8
SCUBE3Q8IX30 AL022718.1-201ENST00000412004 84 ntBASIC3.81□□□□□ -1.8
SCUBE3Q8IX30 AL512326.2-201ENST00000426359 151 ntBASIC3.81□□□□□ -1.8
SCUBE3Q8IX30 AL161788.1-201ENST00000441805 169 ntBASIC3.81□□□□□ -1.8
SCUBE3Q8IX30 RPS12P18-201ENST00000442381 270 ntBASIC3.81□□□□□ -1.8
SCUBE3Q8IX30 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC3.81□□□□□ -1.8
SCUBE3Q8IX30 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC3.81□□□□□ -1.8
SCUBE3Q8IX30 RNU6-991P-201ENST00000516168 107 ntBASIC3.81□□□□□ -1.8
SCUBE3Q8IX30 RNU6-1041P-201ENST00000516254 102 ntBASIC3.81□□□□□ -1.8
SCUBE3Q8IX30 SNORD45.4-201ENST00000516629 73 ntBASIC3.81□□□□□ -1.8
SCUBE3Q8IX30 Y_RNA.705-201ENST00000516862 110 ntBASIC3.81□□□□□ -1.8
SCUBE3Q8IX30 MIR3124-201ENST00000582636 67 ntBASIC3.81□□□□□ -1.8
SCUBE3Q8IX30 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC3.81□□□□□ -1.8
SCUBE3Q8IX30 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms