Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 RNU6-440P-201ENST00000390882 105 ntBASIC1.45□□□□□ -2.18
CCDC60Q8IWA6 AL031003.1-201ENST00000404229 172 ntBASIC1.45□□□□□ -2.18
CCDC60Q8IWA6 MTND4P19-201ENST00000446659 478 ntBASIC1.45□□□□□ -2.18
CCDC60Q8IWA6 AC091021.1-201ENST00000468051 388 ntBASIC1.45□□□□□ -2.18
CCDC60Q8IWA6 RNU6-1278P-201ENST00000516130 107 ntBASIC1.45□□□□□ -2.18
CCDC60Q8IWA6 RNU6-966P-201ENST00000516479 104 ntBASIC1.45□□□□□ -2.18
CCDC60Q8IWA6 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
CCDC60Q8IWA6 AC040926.1-201ENST00000530195 238 ntBASIC1.45□□□□□ -2.18
CCDC60Q8IWA6 SNORA77B-201ENST00000578179 125 ntBASIC1.45□□□□□ -2.18
CCDC60Q8IWA6 ICE2P2-201ENST00000483823 2787 ntBASIC1.45□□□□□ -2.18
CCDC60Q8IWA6 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
CCDC60Q8IWA6 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
CCDC60Q8IWA6 AC005592.1-201ENST00000566527 1640 ntBASIC1.44□□□□□ -2.18
CCDC60Q8IWA6 RNU6-1175P-201ENST00000365200 107 ntBASIC1.44□□□□□ -2.18
CCDC60Q8IWA6 SNORD14.1-201ENST00000365609 90 ntBASIC1.44□□□□□ -2.18
CCDC60Q8IWA6 Y_RNA.424-201ENST00000384063 103 ntBASIC1.44□□□□□ -2.18
CCDC60Q8IWA6 Y_RNA.458-201ENST00000384240 102 ntBASIC1.44□□□□□ -2.18
CCDC60Q8IWA6 RNU6-474P-201ENST00000384243 107 ntBASIC1.44□□□□□ -2.18
CCDC60Q8IWA6 Y_RNA.471-201ENST00000384312 102 ntBASIC1.44□□□□□ -2.18
CCDC60Q8IWA6 RNU6-505P-201ENST00000384427 107 ntBASIC1.44□□□□□ -2.18
CCDC60Q8IWA6 Y_RNA.526-201ENST00000384572 110 ntBASIC1.44□□□□□ -2.18
CCDC60Q8IWA6 RN7SKP200-201ENST00000410564 320 ntBASIC1.44□□□□□ -2.18
CCDC60Q8IWA6 AC068338.1-201ENST00000565567 176 ntBASIC1.44□□□□□ -2.18
CCDC60Q8IWA6 MIR4422-201ENST00000581938 83 ntBASIC1.44□□□□□ -2.18
CCDC60Q8IWA6 AL121655.1-201ENST00000605811 308 ntBASIC1.44□□□□□ -2.18
CCDC60Q8IWA6 AL021879.1-201ENST00000611756 288 ntBASIC1.44□□□□□ -2.18
CCDC60Q8IWA6 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.44□□□□□ -2.18
CCDC60Q8IWA6 Y_RNA.138-201ENST00000363462 102 ntBASIC1.43□□□□□ -2.18
CCDC60Q8IWA6 Y_RNA.230-201ENST00000364348 109 ntBASIC1.43□□□□□ -2.18
CCDC60Q8IWA6 RNU4-50P-201ENST00000364361 141 ntBASIC1.43□□□□□ -2.18
CCDC60Q8IWA6 RNU6-1031P-201ENST00000384773 107 ntBASIC1.43□□□□□ -2.18
CCDC60Q8IWA6 PMCHL1-202ENST00000423102 261 ntBASIC1.43□□□□□ -2.18
CCDC60Q8IWA6 MTCO2P12-201ENST00000427426 682 ntBASIC1.43□□□□□ -2.18
CCDC60Q8IWA6 RPEP5-201ENST00000441137 268 ntBASIC1.43□□□□□ -2.18
CCDC60Q8IWA6 STAG3L5P-204ENST00000443759 179 ntBASIC1.43□□□□□ -2.18
CCDC60Q8IWA6 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.43□□□□□ -2.18
CCDC60Q8IWA6 SNORA25.10-201ENST00000515926 124 ntBASIC1.43□□□□□ -2.18
CCDC60Q8IWA6 SNORA70.12-201ENST00000516084 153 ntBASIC1.43□□□□□ -2.18
CCDC60Q8IWA6 RNU6-1291P-201ENST00000516591 104 ntBASIC1.43□□□□□ -2.18
CCDC60Q8IWA6 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.43□□□□□ -2.18
CCDC60Q8IWA6 AC021506.2-201ENST00000612354 169 ntBASIC1.43□□□□□ -2.18
CCDC60Q8IWA6 MIR7974-201ENST00000615835 79 ntBASIC1.43□□□□□ -2.18
CCDC60Q8IWA6 AC010205.1-201ENST00000616668 449 ntBASIC1.43□□□□□ -2.18
CCDC60Q8IWA6 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.43□□□□□ -2.18
CCDC60Q8IWA6 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
CCDC60Q8IWA6 Y_RNA.148-201ENST00000363557 117 ntBASIC1.42□□□□□ -2.18
CCDC60Q8IWA6 Y_RNA.238-201ENST00000364441 102 ntBASIC1.42□□□□□ -2.18
CCDC60Q8IWA6 Y_RNA.439-201ENST00000384119 94 ntBASIC1.42□□□□□ -2.18
CCDC60Q8IWA6 Y_RNA.570-201ENST00000384750 101 ntBASIC1.42□□□□□ -2.18
CCDC60Q8IWA6 MIR758-201ENST00000390227 88 ntBASIC1.42□□□□□ -2.18
CCDC60Q8IWA6 RNU11-5P-201ENST00000391216 129 ntBASIC1.42□□□□□ -2.18
CCDC60Q8IWA6 MIR1302-11-201ENST00000408051 138 ntBASIC1.42□□□□□ -2.18
CCDC60Q8IWA6 MIR1302-9-201ENST00000408365 138 ntBASIC1.42□□□□□ -2.18
CCDC60Q8IWA6 MIR1302-10-201ENST00000408734 138 ntBASIC1.42□□□□□ -2.18
CCDC60Q8IWA6 RNU6-1199P-201ENST00000411249 104 ntBASIC1.42□□□□□ -2.18
CCDC60Q8IWA6 AC233266.1-201ENST00000454518 96 ntBASIC1.42□□□□□ -2.18
CCDC60Q8IWA6 U8.20-201ENST00000459445 131 ntBASIC1.42□□□□□ -2.18
CCDC60Q8IWA6 Y_RNA.631-201ENST00000459607 101 ntBASIC1.42□□□□□ -2.18
CCDC60Q8IWA6 AC099513.1-201ENST00000490423 301 ntBASIC1.42□□□□□ -2.18
CCDC60Q8IWA6 RNU6-475P-201ENST00000516073 104 ntBASIC1.42□□□□□ -2.18
CCDC60Q8IWA6 RNU6-1337P-201ENST00000516525 95 ntBASIC1.42□□□□□ -2.18
CCDC60Q8IWA6 RNU2-56P-201ENST00000516826 190 ntBASIC1.42□□□□□ -2.18
CCDC60Q8IWA6 AC022441.3-201ENST00000605737 136 ntBASIC1.42□□□□□ -2.18
CCDC60Q8IWA6 MIR1302-2-201ENST00000607096 138 ntBASIC1.42□□□□□ -2.18
CCDC60Q8IWA6 AC242852.1-201ENST00000612151 96 ntBASIC1.42□□□□□ -2.18
CCDC60Q8IWA6 MIR8070-201ENST00000616510 88 ntBASIC1.42□□□□□ -2.18
CCDC60Q8IWA6 AC244015.1-201ENST00000622301 99 ntBASIC1.42□□□□□ -2.18
CCDC60Q8IWA6 AL161722.3-201ENST00000605789 2983 ntBASIC1.41□□□□□ -2.18
CCDC60Q8IWA6 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
CCDC60Q8IWA6 Y_RNA.143-201ENST00000363520 106 ntBASIC1.41□□□□□ -2.18
CCDC60Q8IWA6 RNU6-450P-201ENST00000364654 107 ntBASIC1.41□□□□□ -2.18
CCDC60Q8IWA6 Y_RNA.265-201ENST00000364677 108 ntBASIC1.41□□□□□ -2.18
CCDC60Q8IWA6 Y_RNA.331-201ENST00000365267 102 ntBASIC1.41□□□□□ -2.18
CCDC60Q8IWA6 RNU6-117P-201ENST00000365415 107 ntBASIC1.41□□□□□ -2.18
CCDC60Q8IWA6 RNU6-937P-201ENST00000384325 106 ntBASIC1.41□□□□□ -2.18
CCDC60Q8IWA6 RNU1-78P-201ENST00000391248 165 ntBASIC1.41□□□□□ -2.18
CCDC60Q8IWA6 AL034345.1-201ENST00000407768 123 ntBASIC1.41□□□□□ -2.18
CCDC60Q8IWA6 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.41□□□□□ -2.18
CCDC60Q8IWA6 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.41□□□□□ -2.18
CCDC60Q8IWA6 RNU7-110P-201ENST00000516891 62 ntBASIC1.41□□□□□ -2.18
CCDC60Q8IWA6 AC019176.1-201ENST00000518519 225 ntBASIC1.41□□□□□ -2.18
CCDC60Q8IWA6 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.41□□□□□ -2.18
CCDC60Q8IWA6 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.4□□□□□ -2.19
CCDC60Q8IWA6 WWP1P1-201ENST00000466609 2769 ntBASIC1.4□□□□□ -2.19
CCDC60Q8IWA6 MIR337-201ENST00000362281 93 ntBASIC1.4□□□□□ -2.19
CCDC60Q8IWA6 Y_RNA.28-201ENST00000362554 111 ntBASIC1.4□□□□□ -2.19
CCDC60Q8IWA6 Y_RNA.329-201ENST00000365209 107 ntBASIC1.4□□□□□ -2.19
CCDC60Q8IWA6 Y_RNA.361-201ENST00000365515 120 ntBASIC1.4□□□□□ -2.19
CCDC60Q8IWA6 MIR513A1-201ENST00000385138 129 ntBASIC1.4□□□□□ -2.19
CCDC60Q8IWA6 RNA5SP511-201ENST00000410487 115 ntBASIC1.4□□□□□ -2.19
CCDC60Q8IWA6 AL161935.2-201ENST00000414627 60 ntBASIC1.4□□□□□ -2.19
CCDC60Q8IWA6 AC005042.3-201ENST00000453230 174 ntBASIC1.4□□□□□ -2.19
CCDC60Q8IWA6 AC093852.1-201ENST00000503587 266 ntBASIC1.4□□□□□ -2.19
CCDC60Q8IWA6 RNU6-436P-201ENST00000516171 114 ntBASIC1.4□□□□□ -2.19
CCDC60Q8IWA6 RNU6-397P-201ENST00000516226 104 ntBASIC1.4□□□□□ -2.19
CCDC60Q8IWA6 RNU6-1096P-201ENST00000517089 102 ntBASIC1.4□□□□□ -2.19
CCDC60Q8IWA6 RNU6-988P-201ENST00000519081 107 ntBASIC1.4□□□□□ -2.19
CCDC60Q8IWA6 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.4□□□□□ -2.19
CCDC60Q8IWA6 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC1.4□□□□□ -2.19
CCDC60Q8IWA6 AC124312.5-201ENST00000604451 268 ntBASIC1.4□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms