Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC3.27□□□□□ -1.89
RNF43Q68DV7 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
RNF43Q68DV7 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
RNF43Q68DV7 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.26□□□□□ -1.89
RNF43Q68DV7 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
RNF43Q68DV7 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
RNF43Q68DV7 Y_RNA.220-201ENST00000364244 109 ntBASIC3.26□□□□□ -1.89
RNF43Q68DV7 RNU6-198P-201ENST00000384258 104 ntBASIC3.26□□□□□ -1.89
RNF43Q68DV7 SNORA54-201ENST00000384281 123 ntBASIC3.26□□□□□ -1.89
RNF43Q68DV7 AC018634.1-201ENST00000437554 401 ntBASIC3.26□□□□□ -1.89
RNF43Q68DV7 RNU7-23P-201ENST00000459465 62 ntBASIC3.26□□□□□ -1.89
RNF43Q68DV7 RNU6-1149P-201ENST00000516810 97 ntBASIC3.26□□□□□ -1.89
RNF43Q68DV7 AP000867.2-201ENST00000532468 320 ntBASIC3.26□□□□□ -1.89
RNF43Q68DV7 MIR3945-201ENST00000581853 98 ntBASIC3.26□□□□□ -1.89
RNF43Q68DV7 AC090517.3-201ENST00000625170 141 ntBASIC3.26□□□□□ -1.89
RNF43Q68DV7 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.26□□□□□ -1.89
RNF43Q68DV7 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
RNF43Q68DV7 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.26□□□□□ -1.89
RNF43Q68DV7 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
RNF43Q68DV7 AC091152.2-201ENST00000591628 2569 ntBASIC3.25□□□□□ -1.89
RNF43Q68DV7 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
RNF43Q68DV7 RNU1-22P-201ENST00000363334 158 ntBASIC3.25□□□□□ -1.89
RNF43Q68DV7 RNU6-1292P-201ENST00000383856 107 ntBASIC3.25□□□□□ -1.89
RNF43Q68DV7 MIR29B2-201ENST00000385055 81 ntBASIC3.25□□□□□ -1.89
RNF43Q68DV7 MIR181B1-201ENST00000385240 110 ntBASIC3.25□□□□□ -1.89
RNF43Q68DV7 SNORA48.8-201ENST00000391324 134 ntBASIC3.25□□□□□ -1.89
RNF43Q68DV7 MIR1294-201ENST00000408503 142 ntBASIC3.25□□□□□ -1.89
RNF43Q68DV7 SNORA19.1-201ENST00000410656 129 ntBASIC3.25□□□□□ -1.89
RNF43Q68DV7 AC016909.1-201ENST00000415916 166 ntBASIC3.25□□□□□ -1.89
RNF43Q68DV7 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC3.25□□□□□ -1.89
RNF43Q68DV7 RPL30P14-201ENST00000482744 348 ntBASIC3.25□□□□□ -1.89
RNF43Q68DV7 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.25□□□□□ -1.89
RNF43Q68DV7 MIR6076-201ENST00000617521 113 ntBASIC3.25□□□□□ -1.89
RNF43Q68DV7 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.25□□□□□ -1.89
RNF43Q68DV7 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.25□□□□□ -1.89
RNF43Q68DV7 AC009487.2-201ENST00000420969 6821 ntBASIC3.24□□□□□ -1.89
RNF43Q68DV7 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
RNF43Q68DV7 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
RNF43Q68DV7 RNU6-418P-201ENST00000384035 107 ntBASIC3.24□□□□□ -1.89
RNF43Q68DV7 SNORD61-201ENST00000384252 73 ntBASIC3.24□□□□□ -1.89
RNF43Q68DV7 EIF4EP4-201ENST00000424916 578 ntBASIC3.24□□□□□ -1.89
RNF43Q68DV7 AC011406.1-201ENST00000512440 370 ntBASIC3.24□□□□□ -1.89
RNF43Q68DV7 RNU6-948P-201ENST00000516374 107 ntBASIC3.24□□□□□ -1.89
RNF43Q68DV7 Y_RNA.685-201ENST00000516532 108 ntBASIC3.24□□□□□ -1.89
RNF43Q68DV7 RNU6-1270P-201ENST00000517128 108 ntBASIC3.24□□□□□ -1.89
RNF43Q68DV7 snoMBII-202.2-201ENST00000517263 86 ntBASIC3.24□□□□□ -1.89
RNF43Q68DV7 AC109329.2-201ENST00000519658 482 ntBASIC3.24□□□□□ -1.89
RNF43Q68DV7 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.24□□□□□ -1.89
RNF43Q68DV7 JPX_2.1-201ENST00000614161 69 ntBASIC3.24□□□□□ -1.89
RNF43Q68DV7 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.24□□□□□ -1.89
RNF43Q68DV7 U6.73-201ENST00000619194 103 ntBASIC3.24□□□□□ -1.89
RNF43Q68DV7 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
RNF43Q68DV7 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
RNF43Q68DV7 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
RNF43Q68DV7 Y_RNA.362-201ENST00000365518 110 ntBASIC3.23□□□□□ -1.89
RNF43Q68DV7 RNU6-820P-201ENST00000384273 107 ntBASIC3.23□□□□□ -1.89
RNF43Q68DV7 AL117342.1-201ENST00000404861 406 ntBASIC3.23□□□□□ -1.89
RNF43Q68DV7 AC097463.2-201ENST00000421074 142 ntBASIC3.23□□□□□ -1.89
RNF43Q68DV7 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC3.23□□□□□ -1.89
RNF43Q68DV7 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
RNF43Q68DV7 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
RNF43Q68DV7 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
RNF43Q68DV7 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.22□□□□□ -1.89
RNF43Q68DV7 SNORD31B-201ENST00000364977 69 ntBASIC3.22□□□□□ -1.89
RNF43Q68DV7 RNU6-1240P-201ENST00000365155 104 ntBASIC3.22□□□□□ -1.89
RNF43Q68DV7 RNU6-234P-201ENST00000365229 104 ntBASIC3.22□□□□□ -1.89
RNF43Q68DV7 MIR450A2-201ENST00000385022 100 ntBASIC3.22□□□□□ -1.89
RNF43Q68DV7 RN7SKP220-201ENST00000410611 288 ntBASIC3.22□□□□□ -1.89
RNF43Q68DV7 RNA5SP344-201ENST00000411081 104 ntBASIC3.22□□□□□ -1.89
RNF43Q68DV7 AC008134.1-201ENST00000420943 193 ntBASIC3.22□□□□□ -1.89
RNF43Q68DV7 Z98742.2-201ENST00000431564 187 ntBASIC3.22□□□□□ -1.89
RNF43Q68DV7 MTATP8P2-201ENST00000435212 202 ntBASIC3.22□□□□□ -1.89
RNF43Q68DV7 TRBV25OR9-2-201ENST00000438417 374 ntBASIC3.22□□□□□ -1.89
RNF43Q68DV7 NDUFA4P2-201ENST00000489989 244 ntBASIC3.22□□□□□ -1.89
RNF43Q68DV7 MRPS17P9-201ENST00000511924 393 ntBASIC3.22□□□□□ -1.89
RNF43Q68DV7 AC097462.1-201ENST00000514125 324 ntBASIC3.22□□□□□ -1.89
RNF43Q68DV7 AC008885.1-201ENST00000514930 301 ntBASIC3.22□□□□□ -1.89
RNF43Q68DV7 RNU6ATAC17P-201ENST00000516074 71 ntBASIC3.22□□□□□ -1.89
RNF43Q68DV7 RNU7-172P-201ENST00000517125 64 ntBASIC3.22□□□□□ -1.89
RNF43Q68DV7 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC3.22□□□□□ -1.89
RNF43Q68DV7 MIR5009-201ENST00000578736 100 ntBASIC3.22□□□□□ -1.89
RNF43Q68DV7 UBL5P2-201ENST00000583788 219 ntBASIC3.22□□□□□ -1.89
RNF43Q68DV7 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC3.22□□□□□ -1.89
RNF43Q68DV7 uc_338.14-201ENST00000613162 166 ntBASIC3.22□□□□□ -1.89
RNF43Q68DV7 AC002076.2-201ENST00000617362 122 ntBASIC3.22□□□□□ -1.89
RNF43Q68DV7 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.89
RNF43Q68DV7 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.21□□□□□ -1.89
RNF43Q68DV7 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
RNF43Q68DV7 RNY4P6-201ENST00000363667 96 ntBASIC3.21□□□□□ -1.9
RNF43Q68DV7 Y_RNA.198-201ENST00000364013 98 ntBASIC3.21□□□□□ -1.9
RNF43Q68DV7 AL513477.1-202ENST00000417061 214 ntBASIC3.21□□□□□ -1.9
RNF43Q68DV7 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.21□□□□□ -1.9
RNF43Q68DV7 RNA5SP356-201ENST00000515972 94 ntBASIC3.21□□□□□ -1.9
RNF43Q68DV7 RNU6-240P-201ENST00000516098 97 ntBASIC3.21□□□□□ -1.9
RNF43Q68DV7 SCARNA15-202ENST00000516881 127 ntBASIC3.21□□□□□ -1.9
RNF43Q68DV7 MIR3162-201ENST00000581818 82 ntBASIC3.21□□□□□ -1.9
RNF43Q68DV7 MIR4438-201ENST00000585271 93 ntBASIC3.21□□□□□ -1.9
RNF43Q68DV7 SNORD115-40-201ENST00000606510 82 ntBASIC3.21□□□□□ -1.9
RNF43Q68DV7 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
RNF43Q68DV7 MAPK10-362ENST00000641864 4484 ntBASIC3.21□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 168.8 ms