Protein–RNA interactions for Protein: Q5SRH9

TTC39A, Tetratricopeptide repeat protein 39A, humanhuman

Predictions only

Length 613 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39AQ5SRH9 AL135790.2-201ENST00000437701 267 ntBASIC2.15□□□□□ -2.07
TTC39AQ5SRH9 AL603825.1-201ENST00000438481 80 ntBASIC2.15□□□□□ -2.07
TTC39AQ5SRH9 AL357134.1-201ENST00000445848 426 ntBASIC2.15□□□□□ -2.07
TTC39AQ5SRH9 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.15□□□□□ -2.07
TTC39AQ5SRH9 RNA5SP458-201ENST00000516188 119 ntBASIC2.15□□□□□ -2.07
TTC39AQ5SRH9 SNORA27.4-201ENST00000516650 95 ntBASIC2.15□□□□□ -2.07
TTC39AQ5SRH9 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.15□□□□□ -2.07
TTC39AQ5SRH9 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.07
TTC39AQ5SRH9 Y_RNA.172-201ENST00000363765 102 ntBASIC2.14□□□□□ -2.07
TTC39AQ5SRH9 Y_RNA.269-201ENST00000364685 89 ntBASIC2.14□□□□□ -2.07
TTC39AQ5SRH9 RNU6-407P-201ENST00000365280 104 ntBASIC2.14□□□□□ -2.07
TTC39AQ5SRH9 Y_RNA.478-201ENST00000384358 107 ntBASIC2.14□□□□□ -2.07
TTC39AQ5SRH9 RNU6ATAC19P-201ENST00000408096 110 ntBASIC2.14□□□□□ -2.07
TTC39AQ5SRH9 RNA5SP489-201ENST00000410986 109 ntBASIC2.14□□□□□ -2.07
TTC39AQ5SRH9 AC108059.2-201ENST00000434626 151 ntBASIC2.14□□□□□ -2.07
TTC39AQ5SRH9 AL353689.1-201ENST00000438895 199 ntBASIC2.14□□□□□ -2.07
TTC39AQ5SRH9 SNORA25.15-201ENST00000516487 89 ntBASIC2.14□□□□□ -2.07
TTC39AQ5SRH9 RNU2-34P-201ENST00000516534 121 ntBASIC2.14□□□□□ -2.07
TTC39AQ5SRH9 RNU6-250P-201ENST00000516958 103 ntBASIC2.14□□□□□ -2.07
TTC39AQ5SRH9 RNU6-856P-201ENST00000516959 98 ntBASIC2.14□□□□□ -2.07
TTC39AQ5SRH9 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
TTC39AQ5SRH9 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
TTC39AQ5SRH9 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
TTC39AQ5SRH9 Y_RNA.76-201ENST00000362931 109 ntBASIC2.13□□□□□ -2.07
TTC39AQ5SRH9 Y_RNA.275-201ENST00000364726 110 ntBASIC2.13□□□□□ -2.07
TTC39AQ5SRH9 RNU6-1240P-201ENST00000365155 104 ntBASIC2.13□□□□□ -2.07
TTC39AQ5SRH9 Y_RNA.361-201ENST00000365515 120 ntBASIC2.13□□□□□ -2.07
TTC39AQ5SRH9 RNU6-1289P-201ENST00000384431 106 ntBASIC2.13□□□□□ -2.07
TTC39AQ5SRH9 AL627390.1-201ENST00000396055 340 ntBASIC2.13□□□□□ -2.07
TTC39AQ5SRH9 HMGN2P39-201ENST00000398005 273 ntBASIC2.13□□□□□ -2.07
TTC39AQ5SRH9 RN7SL274P-201ENST00000492268 272 ntBASIC2.13□□□□□ -2.07
TTC39AQ5SRH9 AC010598.1-201ENST00000510378 103 ntBASIC2.13□□□□□ -2.07
TTC39AQ5SRH9 RNU6-1041P-201ENST00000516254 102 ntBASIC2.13□□□□□ -2.07
TTC39AQ5SRH9 AC087441.2-201ENST00000529141 262 ntBASIC2.13□□□□□ -2.07
TTC39AQ5SRH9 BX284668.6-201ENST00000606899 438 ntBASIC2.13□□□□□ -2.07
TTC39AQ5SRH9 AL159152.1-201ENST00000635019 2587 ntBASIC2.13□□□□□ -2.07
TTC39AQ5SRH9 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC2.12□□□□□ -2.07
TTC39AQ5SRH9 SNORA27.1-201ENST00000362604 124 ntBASIC2.12□□□□□ -2.07
TTC39AQ5SRH9 Y_RNA.99-201ENST00000363138 105 ntBASIC2.12□□□□□ -2.07
TTC39AQ5SRH9 Y_RNA.257-201ENST00000364596 102 ntBASIC2.12□□□□□ -2.07
TTC39AQ5SRH9 MIR873-201ENST00000401120 77 ntBASIC2.12□□□□□ -2.07
TTC39AQ5SRH9 RNU6-855P-201ENST00000410395 104 ntBASIC2.12□□□□□ -2.07
TTC39AQ5SRH9 RNU2-14P-201ENST00000411053 191 ntBASIC2.12□□□□□ -2.07
TTC39AQ5SRH9 RNU2-61P-201ENST00000411069 191 ntBASIC2.12□□□□□ -2.07
TTC39AQ5SRH9 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC2.12□□□□□ -2.07
TTC39AQ5SRH9 AC008134.1-201ENST00000420943 193 ntBASIC2.12□□□□□ -2.07
TTC39AQ5SRH9 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.12□□□□□ -2.07
TTC39AQ5SRH9 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.12□□□□□ -2.07
TTC39AQ5SRH9 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC2.12□□□□□ -2.07
TTC39AQ5SRH9 MIR4448-201ENST00000584360 86 ntBASIC2.12□□□□□ -2.07
TTC39AQ5SRH9 AL162424.1-201ENST00000602325 221 ntBASIC2.12□□□□□ -2.07
TTC39AQ5SRH9 UBE2WP1-201ENST00000362030 340 ntBASIC2.11□□□□□ -2.07
TTC39AQ5SRH9 RNU6-1048P-201ENST00000364054 107 ntBASIC2.11□□□□□ -2.07
TTC39AQ5SRH9 RNU6-1164P-201ENST00000364428 107 ntBASIC2.11□□□□□ -2.07
TTC39AQ5SRH9 Y_RNA.552-201ENST00000384665 112 ntBASIC2.11□□□□□ -2.07
TTC39AQ5SRH9 HMGN2P34-201ENST00000437647 269 ntBASIC2.11□□□□□ -2.07
TTC39AQ5SRH9 RPS27P22-201ENST00000478056 241 ntBASIC2.11□□□□□ -2.07
TTC39AQ5SRH9 AC010409.1-201ENST00000487382 476 ntBASIC2.11□□□□□ -2.07
TTC39AQ5SRH9 AC011406.1-201ENST00000512440 370 ntBASIC2.11□□□□□ -2.07
TTC39AQ5SRH9 RNA5SP20-201ENST00000515976 84 ntBASIC2.11□□□□□ -2.07
TTC39AQ5SRH9 SNORD116-28-201ENST00000516123 91 ntBASIC2.11□□□□□ -2.07
TTC39AQ5SRH9 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.11□□□□□ -2.07
TTC39AQ5SRH9 AC026271.5-201ENST00000577873 130 ntBASIC2.11□□□□□ -2.07
TTC39AQ5SRH9 snoU18.1-201ENST00000629629 71 ntBASIC2.11□□□□□ -2.07
TTC39AQ5SRH9 RNU1-17P-201ENST00000363022 152 ntBASIC2.1□□□□□ -2.07
TTC39AQ5SRH9 Y_RNA.122-201ENST00000363331 96 ntBASIC2.1□□□□□ -2.07
TTC39AQ5SRH9 Y_RNA.217-201ENST00000364214 105 ntBASIC2.1□□□□□ -2.07
TTC39AQ5SRH9 RNU6-160P-201ENST00000384591 107 ntBASIC2.1□□□□□ -2.07
TTC39AQ5SRH9 MIR1253-201ENST00000408273 105 ntBASIC2.1□□□□□ -2.07
TTC39AQ5SRH9 Y_RNA.590-201ENST00000410140 107 ntBASIC2.1□□□□□ -2.07
TTC39AQ5SRH9 RNU2-40P-201ENST00000410833 196 ntBASIC2.1□□□□□ -2.07
TTC39AQ5SRH9 AL158823.1-201ENST00000418441 478 ntBASIC2.1□□□□□ -2.07
TTC39AQ5SRH9 AC024067.1-201ENST00000426199 223 ntBASIC2.1□□□□□ -2.07
TTC39AQ5SRH9 Y_RNA.641-201ENST00000459414 105 ntBASIC2.1□□□□□ -2.07
TTC39AQ5SRH9 Y_RNA.679-201ENST00000516416 91 ntBASIC2.1□□□□□ -2.07
TTC39AQ5SRH9 RNU6-1337P-201ENST00000516525 95 ntBASIC2.1□□□□□ -2.07
TTC39AQ5SRH9 RNU6-63P-201ENST00000516690 95 ntBASIC2.1□□□□□ -2.07
TTC39AQ5SRH9 MIR3684-201ENST00000579779 74 ntBASIC2.1□□□□□ -2.07
TTC39AQ5SRH9 AL031274.2-201ENST00000599419 203 ntBASIC2.1□□□□□ -2.07
TTC39AQ5SRH9 AC141273.2-201ENST00000618989 130 ntBASIC2.1□□□□□ -2.07
TTC39AQ5SRH9 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC2.1□□□□□ -2.07
TTC39AQ5SRH9 AC134026.1-201ENST00000623249 2239 ntBASIC2.1□□□□□ -2.07
TTC39AQ5SRH9 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
TTC39AQ5SRH9 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
TTC39AQ5SRH9 RNU6-801P-201ENST00000364087 105 ntBASIC2.09□□□□□ -2.07
TTC39AQ5SRH9 RNA5SP493-201ENST00000364115 91 ntBASIC2.09□□□□□ -2.07
TTC39AQ5SRH9 Y_RNA.287-201ENST00000364853 94 ntBASIC2.09□□□□□ -2.07
TTC39AQ5SRH9 RNA5SP190-201ENST00000365222 118 ntBASIC2.09□□□□□ -2.07
TTC39AQ5SRH9 SNORD116-13-201ENST00000384408 92 ntBASIC2.09□□□□□ -2.07
TTC39AQ5SRH9 RNU6-417P-201ENST00000384712 107 ntBASIC2.09□□□□□ -2.07
TTC39AQ5SRH9 MIR676-201ENST00000390702 67 ntBASIC2.09□□□□□ -2.07
TTC39AQ5SRH9 RNU6-763P-201ENST00000390865 106 ntBASIC2.09□□□□□ -2.07
TTC39AQ5SRH9 SNORA26.5-201ENST00000391215 123 ntBASIC2.09□□□□□ -2.07
TTC39AQ5SRH9 SNORD58.1-201ENST00000391313 66 ntBASIC2.09□□□□□ -2.07
TTC39AQ5SRH9 RNU6-847P-201ENST00000411115 108 ntBASIC2.09□□□□□ -2.07
TTC39AQ5SRH9 HMGN2P19-201ENST00000425149 265 ntBASIC2.09□□□□□ -2.07
TTC39AQ5SRH9 BTF3P11-201ENST00000426582 477 ntBASIC2.09□□□□□ -2.07
TTC39AQ5SRH9 SUMO1P2-201ENST00000452524 304 ntBASIC2.09□□□□□ -2.07
TTC39AQ5SRH9 U8.19-201ENST00000459095 133 ntBASIC2.09□□□□□ -2.07
TTC39AQ5SRH9 RPS26P55-201ENST00000471178 356 ntBASIC2.09□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms